RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 OR4C15Q8NGM1 316 aa6.54□□□□□ -1.36
SMARCE1-211ENST00000493660 OR4Q3Q8NH05 313 aa6.54□□□□□ -1.36
SMARCE1-211ENST00000493660 MARS2Q96GW9 593 aaKnown RBP6.54□□□□□ -1.36
SMARCE1-211ENST00000493660 IMMP1LQ96LU5 166 aa6.54□□□□□ -1.36
SMARCE1-211ENST00000493660 GAL3ST4Q96RP7 486 aa6.54□□□□□ -1.36
SMARCE1-211ENST00000493660 MGLLQ99685 303 aa6.54□□□□□ -1.36
SMARCE1-211ENST00000493660 GSX1Q9H4S2 264 aaPredicted RBP6.54□□□□□ -1.36
SMARCE1-211ENST00000493660 CDCP1Q9H5V8 836 aa6.54□□□□□ -1.36
SMARCE1-211ENST00000493660 MMP25Q9NPA2 562 aa6.54□□□□□ -1.36
SMARCE1-211ENST00000493660 UBQLN4Q9NRR5 601 aa6.54□□□□□ -1.36
SMARCE1-211ENST00000493660 FBXO34Q9NWN3 711 aa6.54□□□□□ -1.36
SMARCE1-211ENST00000493660 VNN3Q9NY84 501 aa6.54□□□□□ -1.36
SMARCE1-211ENST00000493660 TESQ9UGI8 421 aaKnown RBP6.54□□□□□ -1.36
SMARCE1-211ENST00000493660 KCNE5Q9UJ90 142 aa6.54□□□□□ -1.36
SMARCE1-211ENST00000493660 GTF2A1LQ9UNN4 478 aa6.54□□□□□ -1.36
SMARCE1-211ENST00000493660 SLC35A3Q9Y2D2 325 aa6.54□□□□□ -1.36
SMARCE1-211ENST00000493660 CHST2Q9Y4C5 530 aa6.54□□□□□ -1.36
SMARCE1-211ENST00000493660 TRBV11-1A0A0K0K1C0 115 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 A0A0U1RQV5 110 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 A0A1W2PQD3 144 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 TRAPPC13A5PLN9 417 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 MCRIP1C9JLW8 97 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 TNFRSF11BO00300 401 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 PEX12O00623 359 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 HNF1AP20823 631 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 NFYAP23511 347 aaPredicted RBP6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 MAPK3P27361 379 aaPredicted RBP6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 APEX1P27695 318 aaKnown RBP6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 IL12BP29460 328 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 C21orf33P30042 268 aaPredicted RBP6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 CCR6P51684 374 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 SOX8P57073 446 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 RGS8P57771 180 aaPredicted RBP6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 RAP1AP62834 184 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 PLCXD2Q0VAA5 305 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 MAPK14Q16539 360 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 MRPL2Q5T653 305 aaKnown RBP6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 ZNF550Q7Z398 422 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 TMEM179BQ7Z7N9 219 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 ZAR1Q86SH2 424 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 RANBP3LQ86VV4 465 aaPredicted RBP6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 GID4Q8IVV7 300 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 OR56B2PQ8NGI1 322 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 OR4D11Q8NGI4 311 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 OR6T1Q8NGN1 323 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 C22orf15Q8WYQ4 148 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 CNOT9Q92600 299 aaKnown RBP6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 ZG16BQ96DA0 208 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 MRGPRX4Q96LA9 322 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 NOL4LQ96MY1 436 aaPredicted RBP6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 IP6K3Q96PC2 410 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 CDCA4Q9BXL8 241 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 TRIM2Q9C040 744 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 TSPAN10Q9H1Z9 355 aaPredicted RBP6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 HHATLQ9HCP6 504 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 EXOSC4Q9NPD3 245 aaKnown RBP6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 EXOSC3Q9NQT5 275 aaKnown RBP6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 CDV3Q9UKY7 258 aaKnown RBP6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 A4GNTQ9UNA3 340 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 TMEM72A0PK05 275 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 SERINC4A6NH21 518 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 TMEM200CA6NKL6 621 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 HMSDA8MTL9 139 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 M0R3H8 397 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 FAAHO00519 579 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 ADAM10O14672 748 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 SIGLEC5O15389 551 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 DIRAS1O95057 198 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 UTS2O95399 124 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 CD2P06729 351 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 H1F0P07305 194 aaKnown RBP6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 ABOP16442 354 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 ZNF25P17030 456 aaPredicted RBP6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 S100A2P29034 98 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 DLSTP36957 453 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 WNT5AP41221 380 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 FOXL2P58012 376 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 MRPS11P82912 194 aaKnown RBP6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 MPPED2Q15777 294 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 SSX1Q16384 188 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 NNATQ16517 81 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 KCNMB1Q16558 191 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 PYY3Q5JQD4 70 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 FNDC7Q5VTL7 733 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 KIRREL2Q6UWL6 708 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 LRRN1Q6UXK5 716 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 GSG1LQ6UXU4 331 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 DEF8Q6ZN54 512 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 TMUB2Q71RG4 321 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 PPP1R32Q7Z5V6 425 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 DND1Q8IYX4 353 aaKnown RBP6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 FAM71CQ8NEG0 241 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 OR11G2Q8NGC1 345 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 OR10A7Q8NGE5 316 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 TMEM163Q8TC26 289 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 C8orf44Q96CB5 159 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 POLDIP3Q9BY77 421 aaKnown RBP6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 NRSN2Q9GZP1 204 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 SMCO4Q9NRQ5 59 aa6.53□□□□□ -1.36
SMARCE1-211ENST00000493660 ACER3Q9NUN7 267 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms