RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 SSBP3Q9BWW4 388 aaPredicted RBP14.84□□□□□ -0.03
NUP50-218ENST00000493456 SLAMF8Q9P0V8 285 aa14.84□□□□□ -0.03
NUP50-218ENST00000493456 SLC7A7Q9UM01 511 aa14.84□□□□□ -0.03
NUP50-218ENST00000493456 ZNF281Q9Y2X9 895 aa14.84□□□□□ -0.03
NUP50-218ENST00000493456 UGT2A1Q9Y4X1 527 aa14.84□□□□□ -0.03
NUP50-218ENST00000493456 TRAV40A0A0B4J280 105 aa14.83□□□□□ -0.04
NUP50-218ENST00000493456 TIMM23O14925 209 aa14.83□□□□□ -0.04
NUP50-218ENST00000493456 SURF4O15260 269 aa14.83□□□□□ -0.04
NUP50-218ENST00000493456 HOXA3O43365 443 aaPredicted RBP14.83□□□□□ -0.04
NUP50-218ENST00000493456 SLC2A10O95528 541 aa14.83□□□□□ -0.04
NUP50-218ENST00000493456 NGFP01138 241 aa14.83□□□□□ -0.04
NUP50-218ENST00000493456 F13BP05160 661 aa14.83□□□□□ -0.04
NUP50-218ENST00000493456 GSTM3P21266 225 aa14.83□□□□□ -0.04
NUP50-218ENST00000493456 TUBG1P23258 451 aa14.83□□□□□ -0.04
NUP50-218ENST00000493456 RAG2P55895 527 aa14.83□□□□□ -0.04
NUP50-218ENST00000493456 PCBP3P57721 371 aaKnown RBP14.83□□□□□ -0.04
NUP50-218ENST00000493456 ERVK-25P63136 954 aa14.83□□□□□ -0.04
NUP50-218ENST00000493456 PAX2Q02962 417 aa14.83□□□□□ -0.04
NUP50-218ENST00000493456 PSG7Q13046 419 aa14.83□□□□□ -0.04
NUP50-218ENST00000493456 HNRNPA0Q13151 305 aaKnown RBP14.83□□□□□ -0.04
NUP50-218ENST00000493456 TAF11Q15544 211 aa14.83□□□□□ -0.04
NUP50-218ENST00000493456 DUSP7Q16829 419 aa14.83□□□□□ -0.04
NUP50-218ENST00000493456 FAM205BPQ63HN1 556 aa14.83□□□□□ -0.04
NUP50-218ENST00000493456 ANKRD42Q8N9B4 389 aa14.83□□□□□ -0.04
NUP50-218ENST00000493456 C4orf45Q96LM5 186 aa14.83□□□□□ -0.04
NUP50-218ENST00000493456 OR2H1Q9GZK4 316 aa14.83□□□□□ -0.04
NUP50-218ENST00000493456 PCDHAC1Q9H158 963 aa14.83□□□□□ -0.04
NUP50-218ENST00000493456 CENPHQ9H3R5 247 aa14.83□□□□□ -0.04
NUP50-218ENST00000493456 PRDM13Q9H4Q3 707 aa14.83□□□□□ -0.04
NUP50-218ENST00000493456 IKZF5Q9H5V7 419 aa14.83□□□□□ -0.04
NUP50-218ENST00000493456 TUBG2Q9NRH3 451 aa14.83□□□□□ -0.04
NUP50-218ENST00000493456 INIPQ9NRY2 104 aa14.83□□□□□ -0.04
NUP50-218ENST00000493456 MAN2C1Q9NTJ4 1040 aa14.83□□□□□ -0.04
NUP50-218ENST00000493456 IL19Q9UHD0 177 aa14.83□□□□□ -0.04
NUP50-218ENST00000493456 PPP1R3CQ9UQK1 317 aa14.83□□□□□ -0.04
NUP50-218ENST00000493456 IGHV3OR16-10A0A075B7F0 116 aa14.82□□□□□ -0.04
NUP50-218ENST00000493456 FAM181BA6NEQ2 426 aa14.82□□□□□ -0.04
NUP50-218ENST00000493456 NPIPB13A6NJU9 1138 aa14.82□□□□□ -0.04
NUP50-218ENST00000493456 CEACAM18A8MTB9 384 aa14.82□□□□□ -0.04
NUP50-218ENST00000493456 SRRM5B3KS81 715 aa14.82□□□□□ -0.04
NUP50-218ENST00000493456 NPIPB4C9JG80 1138 aa14.82□□□□□ -0.04
NUP50-218ENST00000493456 CRYBA1P05813 215 aa14.82□□□□□ -0.04
NUP50-218ENST00000493456 WDR4P57081 412 aaKnown RBP14.82□□□□□ -0.04
NUP50-218ENST00000493456 PCBD1P61457 104 aa14.82□□□□□ -0.04
NUP50-218ENST00000493456 SRSF4Q08170 494 aaKnown RBP14.82□□□□□ -0.04
NUP50-218ENST00000493456 SGCAQ16586 387 aa14.82□□□□□ -0.04
NUP50-218ENST00000493456 FAM27BQ5VT28 67 aa14.82□□□□□ -0.04
NUP50-218ENST00000493456 OLFML2AQ68BL7 652 aa14.82□□□□□ -0.04
NUP50-218ENST00000493456 BLOC1S3Q6QNY0 202 aa14.82□□□□□ -0.04
NUP50-218ENST00000493456 KIR3DL3Q8N743 410 aa14.82□□□□□ -0.04
NUP50-218ENST00000493456 C11orf65Q8NCR3 313 aa14.82□□□□□ -0.04
NUP50-218ENST00000493456 NPEPL1Q8NDH3 523 aa14.82□□□□□ -0.04
NUP50-218ENST00000493456 OR2Z1Q8NG97 314 aa14.82□□□□□ -0.04
NUP50-218ENST00000493456 NMD3Q96D46 503 aaKnown RBP14.82□□□□□ -0.04
NUP50-218ENST00000493456 SPDL1Q96EA4 605 aa14.82□□□□□ -0.04
NUP50-218ENST00000493456 PKP2Q99959 881 aa14.82□□□□□ -0.04
NUP50-218ENST00000493456 WNT5BQ9H1J7 359 aa14.82□□□□□ -0.04
NUP50-218ENST00000493456 IGHV2-70DA0A0C4DH43 119 aa14.81□□□□□ -0.04
NUP50-218ENST00000493456 MDFIC2A0A1B0GVS7 189 aa14.81□□□□□ -0.04
NUP50-218ENST00000493456 IFNL4K9M1U5 179 aa14.81□□□□□ -0.04
NUP50-218ENST00000493456 NDUFA7O95182 113 aa14.81□□□□□ -0.04
NUP50-218ENST00000493456 CST2P09228 141 aa14.81□□□□□ -0.04
NUP50-218ENST00000493456 WNT2P09544 360 aa14.81□□□□□ -0.04
NUP50-218ENST00000493456 BPIFB3P59826 476 aa14.81□□□□□ -0.04
NUP50-218ENST00000493456 CD47Q08722 323 aa14.81□□□□□ -0.04
NUP50-218ENST00000493456 PAGE3Q5JUK9 113 aa14.81□□□□□ -0.04
NUP50-218ENST00000493456 ARMC4Q5T2S8 1044 aa14.81□□□□□ -0.04
NUP50-218ENST00000493456 ZNF774Q6NX45 483 aa14.81□□□□□ -0.04
NUP50-218ENST00000493456 JAZF1Q86VZ6 243 aa14.81□□□□□ -0.04
NUP50-218ENST00000493456 FUNDC1Q8IVP5 155 aa14.81□□□□□ -0.04
NUP50-218ENST00000493456 GPR32P1Q8NGA4 272 aa14.81□□□□□ -0.04
NUP50-218ENST00000493456 VANGL1Q8TAA9 524 aaPredicted RBP14.81□□□□□ -0.04
NUP50-218ENST00000493456 ITLN1Q8WWA0 313 aa14.81□□□□□ -0.04
NUP50-218ENST00000493456 NSMAFQ92636 917 aa14.81□□□□□ -0.04
NUP50-218ENST00000493456 ZDHHC16Q969W1 377 aa14.81□□□□□ -0.04
NUP50-218ENST00000493456 MEPEQ9NQ76 525 aaPredicted RBP14.81□□□□□ -0.04
NUP50-218ENST00000493456 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.81□□□□□ -0.04
NUP50-218ENST00000493456 NDRG4Q9ULP0 352 aaKnown RBP14.81□□□□□ -0.04
NUP50-218ENST00000493456 TIMM10BQ9Y5J6 103 aa14.81□□□□□ -0.04
NUP50-218ENST00000493456 SOX21Q9Y651 276 aaPredicted RBP14.81□□□□□ -0.04
NUP50-218ENST00000493456 WNK1Q9H4A3 2382 aa14.81□□□□□ -0.04
NUP50-218ENST00000493456 IGKV1D-43A0A0B4J1Z2 117 aa14.8□□□□□ -0.04
NUP50-218ENST00000493456 TMEM178BH3BS89 294 aa14.8□□□□□ -0.04
NUP50-218ENST00000493456 ABHD16AO95870 558 aa14.8□□□□□ -0.04
NUP50-218ENST00000493456 IGF2P01344 180 aa14.8□□□□□ -0.04
NUP50-218ENST00000493456 MT-ND1P03886 318 aa14.8□□□□□ -0.04
NUP50-218ENST00000493456 OPN1SWP03999 348 aa14.8□□□□□ -0.04
NUP50-218ENST00000493456 RPS2P15880 293 aaKnown RBP14.8□□□□□ -0.04
NUP50-218ENST00000493456 CD247P20963 164 aa14.8□□□□□ -0.04
NUP50-218ENST00000493456 KITLGP21583 273 aa14.8□□□□□ -0.04
NUP50-218ENST00000493456 GUCA1AP43080 201 aaPredicted RBP14.8□□□□□ -0.04
NUP50-218ENST00000493456 FMODQ06828 376 aa14.8□□□□□ -0.04
NUP50-218ENST00000493456 WDR93Q6P2C0 686 aa14.8□□□□□ -0.04
NUP50-218ENST00000493456 RBM45Q8IUH3 476 aaKnown RBP14.8□□□□□ -0.04
NUP50-218ENST00000493456 TMEM86BQ8N661 226 aa14.8□□□□□ -0.04
NUP50-218ENST00000493456 FNDC8Q8TC99 324 aa14.8□□□□□ -0.04
NUP50-218ENST00000493456 RAB40AQ8WXH6 277 aa14.8□□□□□ -0.04
NUP50-218ENST00000493456 HDAC2Q92769 488 aaKnown RBP14.8□□□□□ -0.04
NUP50-218ENST00000493456 UBE2FQ969M7 185 aa14.8□□□□□ -0.04
NUP50-218ENST00000493456 PLEKHA8Q96JA3 519 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms