RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 ST13P4Q8IZP2 240 aaPredicted RBP2.46□□□□□ -2.02
PTCD3-218ENST00000493430 OR8H3Q8N146 312 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 ARHGAP24Q8N264 748 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 C10orf111Q8N326 155 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 TCAIMQ8N3R3 496 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 FBXW8Q8N3Y1 598 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 ZCCHC7Q8N3Z6 543 aaKnown RBP2.46□□□□□ -2.02
PTCD3-218ENST00000493430 TBC1D19Q8N5T2 526 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 CCDC63Q8NA47 563 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 POC5Q8NA72 575 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 POGLUT1Q8NBL1 392 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 MORN4Q8NDC4 146 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 NPEPL1Q8NDH3 523 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 WFDC11Q8NEX6 87 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 OR2M3Q8NG83 312 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 OR7A2PQ8NGA2 310 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 GOT1L1Q8NHS2 421 aaPredicted RBP2.46□□□□□ -2.02
PTCD3-218ENST00000493430 SLC22A8Q8TCC7 542 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 PNPT1Q8TCS8 783 aaKnown RBP2.46□□□□□ -2.02
PTCD3-218ENST00000493430 SPPL2AQ8TCT8 520 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 MGARPQ8TDB4 240 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 CA5BP1Q8WTZ4 195 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 CHPT1Q8WUD6 406 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 GATAD1Q8WUU5 269 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 ANKRD7Q92527 254 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 CDS1Q92903 461 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 RAB8BQ92930 207 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 THOC1Q96FV9 657 aaKnown RBP2.46□□□□□ -2.02
PTCD3-218ENST00000493430 ZNF597Q96LX8 424 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 FAM173AQ9BQD7 235 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 CCDC77Q9BR77 488 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 SRSF8Q9BRL6 282 aaKnown RBP2.46□□□□□ -2.02
PTCD3-218ENST00000493430 TTYH2Q9BSA4 534 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 TBCDQ9BTW9 1192 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 DOHHQ9BU89 302 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 OSBPL11Q9BXB4 747 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 SHARPINQ9H0F6 387 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 GLIPR2Q9H4G4 154 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 ELOVL6Q9H5J4 265 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 NT5DC2Q9H857 520 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 METTL7AQ9H8H3 244 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 ZDHHC11Q9H8X9 412 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 CNOT10Q9H9A5 744 aaKnown RBP2.46□□□□□ -2.02
PTCD3-218ENST00000493430 LYRM4Q9HD34 91 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 B3GAT2Q9NPZ5 323 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 KLHL28Q9NXS3 571 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 KLRF1Q9NZS2 232 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 COPS7AQ9UBW8 275 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 MARCOQ9UEW3 520 aaPredicted RBP2.46□□□□□ -2.02
PTCD3-218ENST00000493430 MTRF1LQ9UGC7 380 aaKnown RBP2.46□□□□□ -2.02
PTCD3-218ENST00000493430 TEKT2Q9UIF3 430 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 DAPK2Q9UIK4 370 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 PHF11Q9UIL8 331 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 PPIEQ9UNP9 301 aaKnown RBP2.46□□□□□ -2.02
PTCD3-218ENST00000493430 ENTPD4Q9Y227 616 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 C15orf41Q9Y2V0 281 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 YARS2Q9Y2Z4 477 aaKnown RBP2.46□□□□□ -2.02
PTCD3-218ENST00000493430 NSD1Q96L73 2696 aaPredicted RBP2.46□□□□□ -2.02
PTCD3-218ENST00000493430 MTORP42345 2549 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 CSPG4Q6UVK1 2322 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 MAP1AP78559 2803 aaPredicted RBP2.45□□□□□ -2.02
PTCD3-218ENST00000493430 IQANK1A0A1B0GTG1 560 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 TRIM64A6NGJ6 449 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 TRIM64BA6NI03 449 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 A8MV72 311 aaPredicted RBP2.45□□□□□ -2.02
PTCD3-218ENST00000493430 UPK1AO00322 258 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 EFNA2O43921 213 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 GPRIN2O60269 458 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 MITFO75030 526 aaPredicted RBP2.45□□□□□ -2.02
PTCD3-218ENST00000493430 PEX11AO75192 247 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 LY6HO94772 140 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 SLU7O95391 586 aaKnown RBP2.45□□□□□ -2.02
PTCD3-218ENST00000493430 C6orf47O95873 294 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 IGHV3-9P01782 118 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 IGHG3P01860 377 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 SNRPAP09012 282 aaKnown RBP2.45□□□□□ -2.02
PTCD3-218ENST00000493430 ANXA4P09525 319 aaPredicted RBP2.45□□□□□ -2.02
PTCD3-218ENST00000493430 MYL2P10916 166 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 LAMP1P11279 417 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 MMP9P14780 707 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 CNR1P21554 472 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 PHBP35232 272 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 SFTPDP35247 375 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 SOAT1P35610 550 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 CAPGP40121 348 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 CDKN2CP42773 168 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 CAPZA2P47755 286 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 NCBP2P52298 156 aaKnown RBP eCLIP2.45□□□□□ -2.02
PTCD3-218ENST00000493430 PPP5CP53041 499 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 DIO3P55073 304 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 CSNK2BP67870 215 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 FUT5Q11128 374 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 FUT7Q11130 342 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 FOXF1Q12946 379 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 IFT88Q13099 833 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 NAB1Q13506 487 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 ART3Q13508 389 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 INAQ16352 499 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 ODF4Q2M2E3 257 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 FAM83EQ2M2I3 478 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms