RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 NHLRC3Q5JS37 347 aa2.42□□□□□ -2.02
SNX13-209ENST00000492626 KPRPQ5T749 579 aaPredicted RBP2.42□□□□□ -2.02
SNX13-209ENST00000492626 IGFL2Q6UWQ7 119 aa2.42□□□□□ -2.02
SNX13-209ENST00000492626 MMAAQ8IVH4 418 aaKnown RBP2.42□□□□□ -2.02
SNX13-209ENST00000492626 EID2Q8N6I1 236 aa2.42□□□□□ -2.02
SNX13-209ENST00000492626 BBS1Q8NFJ9 593 aa2.42□□□□□ -2.02
SNX13-209ENST00000492626 OR52H1Q8NGJ2 320 aa2.42□□□□□ -2.02
SNX13-209ENST00000492626 OR2L2Q8NH16 312 aa2.42□□□□□ -2.02
SNX13-209ENST00000492626 HIST1H4GQ99525 98 aa2.42□□□□□ -2.02
SNX13-209ENST00000492626 APOL2Q9BQE5 337 aa2.42□□□□□ -2.02
SNX13-209ENST00000492626 POLR2J2Q9GZM3 115 aaKnown RBP2.42□□□□□ -2.02
SNX13-209ENST00000492626 POLR2J3Q9H1A7 115 aaKnown RBP2.42□□□□□ -2.02
SNX13-209ENST00000492626 GEMIN7Q9H840 131 aaKnown RBP2.42□□□□□ -2.02
SNX13-209ENST00000492626 MIEF1Q9NQG6 463 aa2.42□□□□□ -2.02
SNX13-209ENST00000492626 IFNKQ9P0W0 207 aa2.42□□□□□ -2.02
SNX13-209ENST00000492626 WRAP73Q9P2S5 460 aaPredicted RBP2.42□□□□□ -2.02
SNX13-209ENST00000492626 CHD9Q3L8U1 2897 aa2.42□□□□□ -2.02
SNX13-209ENST00000492626 SHANK1Q9Y566 2161 aa2.42□□□□□ -2.02
SNX13-209ENST00000492626 TRAV9-2A0A087WT02 112 aa2.42□□□□□ -2.02
SNX13-209ENST00000492626 DNALI1O14645 258 aaPredicted RBP2.42□□□□□ -2.02
SNX13-209ENST00000492626 PRKAB2O43741 272 aa2.42□□□□□ -2.02
SNX13-209ENST00000492626 OR2J3O76001 311 aa2.42□□□□□ -2.02
SNX13-209ENST00000492626 TMEM50AO95807 157 aa2.42□□□□□ -2.02
SNX13-209ENST00000492626 HCKP08631 526 aa2.42□□□□□ -2.02
SNX13-209ENST00000492626 UMPSP11172 480 aa2.42□□□□□ -2.02
SNX13-209ENST00000492626 ATP6V1B2P21281 511 aa2.42□□□□□ -2.02
SNX13-209ENST00000492626 QARSP47897 775 aaKnown RBP2.42□□□□□ -2.02
SNX13-209ENST00000492626 ALDH3B2P48448 385 aa2.42□□□□□ -2.02
SNX13-209ENST00000492626 BCAP31P51572 246 aa2.42□□□□□ -2.02
SNX13-209ENST00000492626 RAB10P61026 200 aa2.42□□□□□ -2.02
SNX13-209ENST00000492626 MRPS22P82650 360 aaKnown RBP2.42□□□□□ -2.02
SNX13-209ENST00000492626 DUSP7Q16829 419 aa2.42□□□□□ -2.02
SNX13-209ENST00000492626 HIGD2BQ4VC39 106 aa2.42□□□□□ -2.02
SNX13-209ENST00000492626 WSCD1Q658N2 575 aa2.42□□□□□ -2.02
SNX13-209ENST00000492626 LEMD1Q68G75 181 aa2.42□□□□□ -2.02
SNX13-209ENST00000492626 PAQR6Q6TCH4 344 aa2.42□□□□□ -2.02
SNX13-209ENST00000492626 UQCC3Q6UW78 93 aa2.42□□□□□ -2.02
SNX13-209ENST00000492626 USP43Q70EL4 1123 aa2.42□□□□□ -2.02
SNX13-209ENST00000492626 MOB1BQ7L9L4 216 aa2.42□□□□□ -2.02
SNX13-209ENST00000492626 SLC16A14Q7RTX9 510 aa2.42□□□□□ -2.02
SNX13-209ENST00000492626 LINC01561Q8N1V8 128 aa2.42□□□□□ -2.02
SNX13-209ENST00000492626 WDSUB1Q8N9V3 476 aa2.42□□□□□ -2.02
SNX13-209ENST00000492626 SDR9C7Q8NEX9 313 aa2.42□□□□□ -2.02
SNX13-209ENST00000492626 OR7G2Q8NG99 324 aa2.42□□□□□ -2.02
SNX13-209ENST00000492626 OR4A4PQ8NGN8 299 aa2.42□□□□□ -2.02
SNX13-209ENST00000492626 CELF6Q96J87 481 aaKnown RBP2.42□□□□□ -2.02
SNX13-209ENST00000492626 TM2D1Q9BX74 207 aa2.42□□□□□ -2.02
SNX13-209ENST00000492626 INIPQ9NRY2 104 aa2.42□□□□□ -2.02
SNX13-209ENST00000492626 OR1A1Q9P1Q5 309 aa2.42□□□□□ -2.02
SNX13-209ENST00000492626 PACSIN2Q9UNF0 486 aaPredicted RBP2.42□□□□□ -2.02
SNX13-209ENST00000492626 IGHV3-16A0A0C4DH30 117 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 F8VZ95 297 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 KCNAB3O43448 404 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 GALR3O60755 368 aaPredicted RBP2.41□□□□□ -2.02
SNX13-209ENST00000492626 SMC2O95347 1197 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 CRYGBP07316 175 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 PLEKP08567 350 aaPredicted RBP2.41□□□□□ -2.02
SNX13-209ENST00000492626 ANXA5P08758 320 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 TCN2P20062 427 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 CMA1P23946 247 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 HNRNPH3P31942 346 aaKnown RBP2.41□□□□□ -2.02
SNX13-209ENST00000492626 GSK3BP49841 420 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 UGT2B15P54855 530 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 ASAH1Q13510 395 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 BEX5Q5H9J7 111 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 TMEM53Q6P2H8 277 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 CCDC54Q8NEL0 328 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 RHOXF1Q8NHV9 184 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 ISG20Q96AZ6 181 aaKnown RBP2.41□□□□□ -2.02
SNX13-209ENST00000492626 RMND5BQ96G75 393 aaPredicted RBP2.41□□□□□ -2.02
SNX13-209ENST00000492626 POM121L2Q96KW2 1035 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 SIKE1Q9BRV8 207 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 MFFQ9GZY8 342 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 IKZF5Q9H5V7 419 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 DCDC2Q9UHG0 476 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 MED13Q9UHV7 2174 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 ANAPC1Q9H1A4 1944 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 VSTM2BA6NLU5 285 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 WWP2O00308 870 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 HSBP1O75506 76 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 SCRG1O75711 98 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 SLC2A10O95528 541 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 IGHG3P01860 377 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 OR8G3PP0DMU2 310 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 HPGDP15428 266 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 PRKACAP17612 351 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 MSR1P21757 451 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 CD1BP29016 333 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 FOXN2P32314 431 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 SLC1A1P43005 524 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 RAB9AP51151 201 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 PRPSAP1Q14558 356 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 TIGD3Q6B0B8 471 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 C22orf42Q6IC83 251 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 ADAM5Q6NVV9 412 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 CCBE1Q6UXH8 406 aaPredicted RBP2.41□□□□□ -2.02
SNX13-209ENST00000492626 Q6ZS92 163 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 ACOT7LQ6ZUV0 252 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 FRA10AC1Q70Z53 315 aa2.41□□□□□ -2.02
SNX13-209ENST00000492626 VRK2Q86Y07 508 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms