RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 ASPNQ9BXN1 380 aa11.53□□□□□ -0.56
HDAC3-213ENST00000492506 MMP28Q9H239 520 aa11.53□□□□□ -0.56
HDAC3-213ENST00000492506 PPIL3Q9H2H8 161 aaKnown RBP11.53□□□□□ -0.56
HDAC3-213ENST00000492506 CXorf36Q9H7Y0 433 aa11.53□□□□□ -0.56
HDAC3-213ENST00000492506 BCO1Q9HAY6 547 aa11.53□□□□□ -0.56
HDAC3-213ENST00000492506 PFDN2Q9UHV9 154 aa11.53□□□□□ -0.56
HDAC3-213ENST00000492506 V9GYQ6 96 aa11.53□□□□□ -0.56
HDAC3-213ENST00000492506 FAM240BA0A1B0GVZ2 78 aa11.52□□□□□ -0.57
HDAC3-213ENST00000492506 FABP12A6NFH5 140 aa11.52□□□□□ -0.57
HDAC3-213ENST00000492506 ZNF670-ZNF695F2Z2N8 137 aa11.52□□□□□ -0.57
HDAC3-213ENST00000492506 WBP4O75554 376 aaKnown RBP11.52□□□□□ -0.57
HDAC3-213ENST00000492506 SERPINA1P01009 418 aa11.52□□□□□ -0.57
HDAC3-213ENST00000492506 CSF3P09919 207 aa11.52□□□□□ -0.57
HDAC3-213ENST00000492506 TSPAN19P0C672 248 aa11.52□□□□□ -0.57
HDAC3-213ENST00000492506 ARSBP15848 533 aa11.52□□□□□ -0.57
HDAC3-213ENST00000492506 USF1P22415 310 aaPredicted RBP11.52□□□□□ -0.57
HDAC3-213ENST00000492506 IGHV1-2P23083 117 aa11.52□□□□□ -0.57
HDAC3-213ENST00000492506 STOMP27105 288 aa11.52□□□□□ -0.57
HDAC3-213ENST00000492506 LSM11P83369 360 aaKnown RBP eCLIP11.52□□□□□ -0.57
HDAC3-213ENST00000492506 SPOCK1Q08629 439 aa11.52□□□□□ -0.57
HDAC3-213ENST00000492506 FOXF1Q12946 379 aa11.52□□□□□ -0.57
HDAC3-213ENST00000492506 NPRL3Q12980 569 aa11.52□□□□□ -0.57
HDAC3-213ENST00000492506 RAB35Q15286 201 aa11.52□□□□□ -0.57
HDAC3-213ENST00000492506 CD226Q15762 336 aa11.52□□□□□ -0.57
HDAC3-213ENST00000492506 ZNF79Q15937 498 aa11.52□□□□□ -0.57
HDAC3-213ENST00000492506 CLEC6AQ6EIG7 209 aa11.52□□□□□ -0.57
HDAC3-213ENST00000492506 KLHL17Q6TDP4 642 aa11.52□□□□□ -0.57
HDAC3-213ENST00000492506 B3GLCTQ6Y288 498 aa11.52□□□□□ -0.57
HDAC3-213ENST00000492506 RNF165Q6ZSG1 346 aa11.52□□□□□ -0.57
HDAC3-213ENST00000492506 GPRIN3Q6ZVF9 776 aa11.52□□□□□ -0.57
HDAC3-213ENST00000492506 ZDHHC21Q8IVQ6 265 aa11.52□□□□□ -0.57
HDAC3-213ENST00000492506 SLC37A3Q8NCC5 494 aa11.52□□□□□ -0.57
HDAC3-213ENST00000492506 METTL6Q8TCB7 284 aa11.52□□□□□ -0.57
HDAC3-213ENST00000492506 GPR151Q8TDV0 419 aa11.52□□□□□ -0.57
HDAC3-213ENST00000492506 OTULINQ96BN8 352 aa11.52□□□□□ -0.57
HDAC3-213ENST00000492506 PPP3R2Q96LZ3 170 aa11.52□□□□□ -0.57
HDAC3-213ENST00000492506 ZNF583Q96ND8 569 aa11.52□□□□□ -0.57
HDAC3-213ENST00000492506 ERMAPQ96PL5 475 aaPredicted RBP11.52□□□□□ -0.57
HDAC3-213ENST00000492506 EPYCQ99645 322 aa11.52□□□□□ -0.57
HDAC3-213ENST00000492506 WACQ9BTA9 647 aa11.52□□□□□ -0.57
HDAC3-213ENST00000492506 OR51E2Q9H255 320 aa11.52□□□□□ -0.57
HDAC3-213ENST00000492506 FN3KQ9H479 309 aa11.52□□□□□ -0.57
HDAC3-213ENST00000492506 HHATLQ9HCP6 504 aa11.52□□□□□ -0.57
HDAC3-213ENST00000492506 EQTNQ9NQ60 294 aa11.52□□□□□ -0.57
HDAC3-213ENST00000492506 RDH8Q9NYR8 311 aa11.52□□□□□ -0.57
HDAC3-213ENST00000492506 TMCC3Q9ULS5 477 aa11.52□□□□□ -0.57
HDAC3-213ENST00000492506 COPS3Q9UNS2 423 aa11.52□□□□□ -0.57
HDAC3-213ENST00000492506 TMEM5Q9Y2B1 443 aa11.52□□□□□ -0.57
HDAC3-213ENST00000492506 A0A1W2PQD3 144 aa11.51□□□□□ -0.57
HDAC3-213ENST00000492506 SERTM1A2A2V5 107 aa11.51□□□□□ -0.57
HDAC3-213ENST00000492506 MPTX1A8MV57 137 aa11.51□□□□□ -0.57
HDAC3-213ENST00000492506 VWC2LB2RUY7 222 aa11.51□□□□□ -0.57
HDAC3-213ENST00000492506 AKR7A2O43488 359 aa11.51□□□□□ -0.57
HDAC3-213ENST00000492506 RGS14O43566 566 aa11.51□□□□□ -0.57
HDAC3-213ENST00000492506 SCO1O75880 301 aa11.51□□□□□ -0.57
HDAC3-213ENST00000492506 ACP2P11117 423 aa11.51□□□□□ -0.57
HDAC3-213ENST00000492506 PRPS2P11908 318 aa11.51□□□□□ -0.57
HDAC3-213ENST00000492506 ZNF250P15622 560 aa11.51□□□□□ -0.57
HDAC3-213ENST00000492506 PSMA1P25786 263 aaKnown RBP11.51□□□□□ -0.57
HDAC3-213ENST00000492506 MAPK1P28482 360 aa11.51□□□□□ -0.57
HDAC3-213ENST00000492506 EIF1P41567 113 aaKnown RBP11.51□□□□□ -0.57
HDAC3-213ENST00000492506 INPP1P49441 399 aa11.51□□□□□ -0.57
HDAC3-213ENST00000492506 RAG2P55895 527 aa11.51□□□□□ -0.57
HDAC3-213ENST00000492506 TP53BP2Q13625 1128 aa11.51□□□□□ -0.57
HDAC3-213ENST00000492506 LARS2Q15031 903 aaKnown RBP11.51□□□□□ -0.57
HDAC3-213ENST00000492506 IGSF11Q5DX21 431 aa11.51□□□□□ -0.57
HDAC3-213ENST00000492506 ZMAT1Q5H9K5 638 aa11.51□□□□□ -0.57
HDAC3-213ENST00000492506 MEDAGQ5VYS4 303 aa11.51□□□□□ -0.57
HDAC3-213ENST00000492506 MSANTD1Q6ZTZ1 278 aa11.51□□□□□ -0.57
HDAC3-213ENST00000492506 SSX8Q7RTT4 187 aa11.51□□□□□ -0.57
HDAC3-213ENST00000492506 ZNF551Q7Z340 670 aaPredicted RBP11.51□□□□□ -0.57
HDAC3-213ENST00000492506 MUC15Q8N387 334 aa11.51□□□□□ -0.57
HDAC3-213ENST00000492506 OR4A15Q8NGL6 344 aa11.51□□□□□ -0.57
HDAC3-213ENST00000492506 TEX47Q8TBZ9 253 aa11.51□□□□□ -0.57
HDAC3-213ENST00000492506 ZNF524Q96C55 264 aa11.51□□□□□ -0.57
HDAC3-213ENST00000492506 MSI2Q96DH6 328 aaKnown RBP11.51□□□□□ -0.57
HDAC3-213ENST00000492506 MUCL1Q96DR8 90 aa11.51□□□□□ -0.57
HDAC3-213ENST00000492506 OR2M2Q96R28 347 aa11.51□□□□□ -0.57
HDAC3-213ENST00000492506 KCNA7Q96RP8 456 aa11.51□□□□□ -0.57
HDAC3-213ENST00000492506 TAPBPLQ9BX59 468 aa11.51□□□□□ -0.57
HDAC3-213ENST00000492506 ZNF436Q9C0F3 470 aaPredicted RBP11.51□□□□□ -0.57
HDAC3-213ENST00000492506 MED28Q9H204 178 aa11.51□□□□□ -0.57
HDAC3-213ENST00000492506 MYNNQ9NPC7 610 aa11.51□□□□□ -0.57
HDAC3-213ENST00000492506 MIEF1Q9NQG6 463 aa11.51□□□□□ -0.57
HDAC3-213ENST00000492506 ZNF275Q9NSD4 429 aaPredicted RBP11.51□□□□□ -0.57
HDAC3-213ENST00000492506 C1orf109Q9NX04 203 aa11.51□□□□□ -0.57
HDAC3-213ENST00000492506 SH3BP4Q9P0V3 963 aa11.51□□□□□ -0.57
HDAC3-213ENST00000492506 SSR3Q9UNL2 185 aa11.51□□□□□ -0.57
HDAC3-213ENST00000492506 PKD1L1Q8TDX9 2849 aa11.51□□□□□ -0.57
HDAC3-213ENST00000492506 NUP214P35658 2090 aaPredicted RBP11.51□□□□□ -0.57
HDAC3-213ENST00000492506 IGHV3-15A0A0B4J1V0 119 aa11.5□□□□□ -0.57
HDAC3-213ENST00000492506 OR5H1A6NKK0 313 aa11.5□□□□□ -0.57
HDAC3-213ENST00000492506 INMT-MINDY4F8WBC2 141 aa11.5□□□□□ -0.57
HDAC3-213ENST00000492506 OIP5O43482 229 aa11.5□□□□□ -0.57
HDAC3-213ENST00000492506 LY6HO94772 140 aa11.5□□□□□ -0.57
HDAC3-213ENST00000492506 IL6P05231 212 aa11.5□□□□□ -0.57
HDAC3-213ENST00000492506 SCG5P05408 212 aa11.5□□□□□ -0.57
HDAC3-213ENST00000492506 GAAP10253 952 aa11.5□□□□□ -0.57
HDAC3-213ENST00000492506 NTSP30990 170 aa11.5□□□□□ -0.57
HDAC3-213ENST00000492506 EFNA4P52798 201 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms