RNA–Protein interactions for RNA: ENST00000490399.5

PRPF4B-207, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 576 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-207ENST00000490399 UBE2ZQ9H832 354 aaPredicted RBP2.41□□□□□ -2.02
PRPF4B-207ENST00000490399 PSMC3IPQ9P2W1 217 aaPredicted RBP2.41□□□□□ -2.02
PRPF4B-207ENST00000490399 CTSFQ9UBX1 484 aa2.41□□□□□ -2.02
PRPF4B-207ENST00000490399 GGA2Q9UJY4 613 aa2.41□□□□□ -2.02
PRPF4B-207ENST00000490399 STARD10Q9Y365 291 aa2.41□□□□□ -2.02
PRPF4B-207ENST00000490399 GOLT1BQ9Y3E0 138 aa2.41□□□□□ -2.02
PRPF4B-207ENST00000490399 TMEM14AQ9Y6G1 99 aa2.41□□□□□ -2.02
PRPF4B-207ENST00000490399 TSPOAP1O95153 1857 aa2.4□□□□□ -2.03
PRPF4B-207ENST00000490399 IGKV1D-17A0A075B6S4 117 aa2.4□□□□□ -2.03
PRPF4B-207ENST00000490399 GLYATL1P3A0A0U1RQE8 302 aa2.4□□□□□ -2.03
PRPF4B-207ENST00000490399 CDC7O00311 574 aa2.4□□□□□ -2.03
PRPF4B-207ENST00000490399 MRPS12O15235 138 aaKnown RBP2.4□□□□□ -2.03
PRPF4B-207ENST00000490399 CCNKO75909 580 aa2.4□□□□□ -2.03
PRPF4B-207ENST00000490399 IGKV1-17P01599 117 aa2.4□□□□□ -2.03
PRPF4B-207ENST00000490399 ANXA5P08758 320 aa2.4□□□□□ -2.03
PRPF4B-207ENST00000490399 OR56A5P0C7T3 313 aa2.4□□□□□ -2.03
PRPF4B-207ENST00000490399 OR5H8P0DN80 308 aa2.4□□□□□ -2.03
PRPF4B-207ENST00000490399 TNNI1P19237 187 aa2.4□□□□□ -2.03
PRPF4B-207ENST00000490399 CEACAM3P40198 252 aa2.4□□□□□ -2.03
PRPF4B-207ENST00000490399 NSG1P42857 185 aa2.4□□□□□ -2.03
PRPF4B-207ENST00000490399 KIR3DL2P43630 455 aa2.4□□□□□ -2.03
PRPF4B-207ENST00000490399 ACTR3P61158 418 aa2.4□□□□□ -2.03
PRPF4B-207ENST00000490399 RCAN2Q14206 197 aa2.4□□□□□ -2.03
PRPF4B-207ENST00000490399 VPS26BQ4G0F5 336 aa2.4□□□□□ -2.03
PRPF4B-207ENST00000490399 CEP55Q53EZ4 464 aa2.4□□□□□ -2.03
PRPF4B-207ENST00000490399 SMUG1Q53HV7 270 aa2.4□□□□□ -2.03
PRPF4B-207ENST00000490399 METTL21CQ5VZV1 264 aa2.4□□□□□ -2.03
PRPF4B-207ENST00000490399 PRSS58Q8IYP2 241 aa2.4□□□□□ -2.03
PRPF4B-207ENST00000490399 NECAB1Q8N987 351 aa2.4□□□□□ -2.03
PRPF4B-207ENST00000490399 FBXL13Q8NEE6 735 aa2.4□□□□□ -2.03
PRPF4B-207ENST00000490399 OR52P1PQ8NH57 321 aa2.4□□□□□ -2.03
PRPF4B-207ENST00000490399 RNF139Q8WU17 664 aa2.4□□□□□ -2.03
PRPF4B-207ENST00000490399 CCDC126Q96EE4 140 aa2.4□□□□□ -2.03
PRPF4B-207ENST00000490399 DUS3LQ96G46 650 aaKnown RBP2.4□□□□□ -2.03
PRPF4B-207ENST00000490399 SLC29A1Q99808 456 aa2.4□□□□□ -2.03
PRPF4B-207ENST00000490399 FOXC2Q99958 501 aa2.4□□□□□ -2.03
PRPF4B-207ENST00000490399 SPNS1Q9H2V7 528 aa2.4□□□□□ -2.03
PRPF4B-207ENST00000490399 SLC2A8Q9NY64 477 aa2.4□□□□□ -2.03
PRPF4B-207ENST00000490399 COX16Q9P0S2 106 aa2.4□□□□□ -2.03
PRPF4B-207ENST00000490399 TMED5Q9Y3A6 229 aa2.4□□□□□ -2.03
PRPF4B-207ENST00000490399 IGLV1-50A0A075B6I6 118 aa2.39□□□□□ -2.03
PRPF4B-207ENST00000490399 RAB29O14966 203 aa2.39□□□□□ -2.03
PRPF4B-207ENST00000490399 SERPINA5P05154 406 aa2.39□□□□□ -2.03
PRPF4B-207ENST00000490399 RAB3BP20337 219 aa2.39□□□□□ -2.03
PRPF4B-207ENST00000490399 CX3CR1P49238 355 aa2.39□□□□□ -2.03
PRPF4B-207ENST00000490399 SLC11A1P49279 550 aa2.39□□□□□ -2.03
PRPF4B-207ENST00000490399 TMED10P49755 219 aaKnown RBP2.39□□□□□ -2.03
PRPF4B-207ENST00000490399 CACNG7P62955 275 aa2.39□□□□□ -2.03
PRPF4B-207ENST00000490399 CHRFAM7AQ494W8 412 aa2.39□□□□□ -2.03
PRPF4B-207ENST00000490399 SASS6Q6UVJ0 657 aa2.39□□□□□ -2.03
PRPF4B-207ENST00000490399 TMEM107Q6UX40 140 aa2.39□□□□□ -2.03
PRPF4B-207ENST00000490399 SPATA4Q8NEY3 305 aa2.39□□□□□ -2.03
PRPF4B-207ENST00000490399 OR8U1Q8NH10 309 aa2.39□□□□□ -2.03
PRPF4B-207ENST00000490399 COQ8AQ8NI60 647 aa2.39□□□□□ -2.03
PRPF4B-207ENST00000490399 KCNG3Q8TAE7 436 aa2.39□□□□□ -2.03
PRPF4B-207ENST00000490399 GPR151Q8TDV0 419 aa2.39□□□□□ -2.03
PRPF4B-207ENST00000490399 C15orf40Q8WUR7 153 aa2.39□□□□□ -2.03
PRPF4B-207ENST00000490399 ZNF606Q8WXB4 792 aa2.39□□□□□ -2.03
PRPF4B-207ENST00000490399 SHC3Q92529 594 aa2.39□□□□□ -2.03
PRPF4B-207ENST00000490399 L3HYPDHQ96EM0 354 aa2.39□□□□□ -2.03
PRPF4B-207ENST00000490399 CNDP1Q96KN2 507 aa2.39□□□□□ -2.03
PRPF4B-207ENST00000490399 WIF1Q9Y5W5 379 aa2.39□□□□□ -2.03
PRPF4B-207ENST00000490399 IKBKGQ9Y6K9 419 aa2.39□□□□□ -2.03
PRPF4B-207ENST00000490399 YEATS2Q9ULM3 1422 aa2.39□□□□□ -2.03
PRPF4B-207ENST00000490399 IGLV1-36A0A0B4J1U3 117 aa2.38□□□□□ -2.03
PRPF4B-207ENST00000490399 TRAV40A0A0B4J280 105 aa2.38□□□□□ -2.03
PRPF4B-207ENST00000490399 SMCO2A6NFE2 343 aa2.38□□□□□ -2.03
PRPF4B-207ENST00000490399 RPL36A-HNRNPH2H7BZ11 118 aa2.38□□□□□ -2.03
PRPF4B-207ENST00000490399 K7EM74 188 aa2.38□□□□□ -2.03
PRPF4B-207ENST00000490399 L7N2F9 121 aa2.38□□□□□ -2.03
PRPF4B-207ENST00000490399 GCM2O75603 506 aaPredicted RBP2.38□□□□□ -2.03
PRPF4B-207ENST00000490399 RCBTB2O95199 551 aa2.38□□□□□ -2.03
PRPF4B-207ENST00000490399 ZNF806P0C7X5 589 aa2.38□□□□□ -2.03
PRPF4B-207ENST00000490399 PRMT2P55345 433 aa2.38□□□□□ -2.03
PRPF4B-207ENST00000490399 CDH17Q12864 832 aa2.38□□□□□ -2.03
PRPF4B-207ENST00000490399 KRTAP13-2Q52LG2 175 aa2.38□□□□□ -2.03
PRPF4B-207ENST00000490399 ADAMTS13Q76LX8 1427 aa2.38□□□□□ -2.03
PRPF4B-207ENST00000490399 SLC22A9Q8IVM8 553 aa2.38□□□□□ -2.03
PRPF4B-207ENST00000490399 RGP1Q92546 391 aaPredicted RBP2.38□□□□□ -2.03
PRPF4B-207ENST00000490399 NARS2Q96I59 477 aaKnown RBP2.38□□□□□ -2.03
PRPF4B-207ENST00000490399 PARP12Q9H0J9 701 aaKnown RBP2.38□□□□□ -2.03
PRPF4B-207ENST00000490399 FAM49BQ9NUQ9 324 aa2.38□□□□□ -2.03
PRPF4B-207ENST00000490399 TSSC4Q9Y5U2 329 aaPredicted RBP2.38□□□□□ -2.03
PRPF4B-207ENST00000490399 HIVEP2P31629 2446 aa2.37□□□□□ -2.03
PRPF4B-207ENST00000490399 NUPL2O15504 423 aaKnown RBP2.37□□□□□ -2.03
PRPF4B-207ENST00000490399 NDUFB10O96000 172 aa2.37□□□□□ -2.03
PRPF4B-207ENST00000490399 IGLV3-19P01714 112 aa2.37□□□□□ -2.03
PRPF4B-207ENST00000490399 APCSP02743 223 aa2.37□□□□□ -2.03
PRPF4B-207ENST00000490399 DCNP07585 359 aaKnown RBP2.37□□□□□ -2.03
PRPF4B-207ENST00000490399 UQCRFS1P1P0C7P4 283 aa2.37□□□□□ -2.03
PRPF4B-207ENST00000490399 CCNB1P14635 433 aa2.37□□□□□ -2.03
PRPF4B-207ENST00000490399 GPX4P36969 197 aaPredicted RBP2.37□□□□□ -2.03
PRPF4B-207ENST00000490399 CDC20Q12834 499 aa2.37□□□□□ -2.03
PRPF4B-207ENST00000490399 SOHLH1Q5JUK2 328 aa2.37□□□□□ -2.03
PRPF4B-207ENST00000490399 PPM1LQ5SGD2 360 aa2.37□□□□□ -2.03
PRPF4B-207ENST00000490399 THEM4Q5T1C6 240 aa2.37□□□□□ -2.03
PRPF4B-207ENST00000490399 NEGR1Q7Z3B1 354 aa2.37□□□□□ -2.03
PRPF4B-207ENST00000490399 CDR2LQ86X02 465 aaPredicted RBP2.37□□□□□ -2.03
PRPF4B-207ENST00000490399 CALHM1Q8IU99 346 aa2.37□□□□□ -2.03
PRPF4B-207ENST00000490399 LYPD1Q8N2G4 141 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms