RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 ARF6P62330 175 aa5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 CD83Q01151 205 aa5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 HABP2Q14520 560 aaPredicted RBP5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 PTGR1Q14914 329 aa5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 UAP1Q16222 522 aaPredicted RBP5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 LSM12Q3MHD2 195 aaKnown RBP5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 PABPC1L2AQ5JQF8 200 aa5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 ATG16L1Q676U5 607 aa5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 TNFAIP8L2Q6P589 184 aaPredicted RBP5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 LRFN4Q6PJG9 635 aa5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 DCDC5Q6ZRR9 648 aa5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 H1FNTQ75WM6 255 aaPredicted RBP5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 DPPA2Q7Z7J5 298 aa5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 VRK2Q86Y07 508 aa5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 MIER2Q8N344 545 aa5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 SCAIQ8N9R8 606 aa5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 OR2Z1Q8NG97 314 aa5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 OR4K5Q8NGD3 323 aa5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 OR6N1Q8NGY5 312 aa5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 XAGE5Q8WWM1 108 aa5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 TMEM54Q969K7 222 aa5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 TAAR8Q969N4 342 aa5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 C3orf30Q96M34 536 aa5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 TUBB1Q9H4B7 451 aa5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 RNF121Q9H920 327 aa5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 ZNF702PQ9H963 129 aa5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 SMURF1Q9HCE7 757 aa5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 C20orf141Q9NUB4 165 aa5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 TMEM216Q9P0N5 145 aa5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 PRDM4Q9UKN5 801 aa5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 TMED5Q9Y3A6 229 aa5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 MAB21L2Q9Y586 359 aa5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 IGKV1D-42A0A075B6H8 117 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 A0A087WUJ7 227 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 IQCMA0A1B0GVH7 501 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 H0YHG0 523 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 H3BUX3 64 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 IFNL4K9M1U5 179 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 SURF4O15260 269 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 TIMM8AO60220 97 aaPredicted RBP5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 C1QCP02747 245 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 CHRM2P08172 466 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 PF4V1P10720 104 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 NCF2P19878 526 aaPredicted RBP5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 TAC1P20366 129 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 KITLGP21583 273 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 CCNOP22674 350 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 AHCYP23526 432 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 STOMP27105 288 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 MAPK1P28482 360 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 GTF2E2P29084 291 aaKnown RBP5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 APLNRP35414 380 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 RPL3P39023 403 aaKnown RBP5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 PMELP40967 661 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 CRATP43155 626 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 NPY4RP50391 375 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 PPP1CBP62140 327 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 MRPS25P82663 173 aaKnown RBP5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 PLP2Q04941 152 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 ZNF181Q2M3W8 571 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 SLC36A2Q495M3 483 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 RUNDC3AQ59EK9 446 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 FAM69AQ5T7M9 428 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 ATAD3BQ5T9A4 648 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 CD276Q5ZPR3 534 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 METAP1DQ6UB28 335 aaPredicted RBP5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 SLC16A14Q7RTX9 510 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 RIMKLAQ8IXN7 391 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 ZNF440Q8IYI8 595 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 Q8N2B8 174 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 KRTCAP2Q8N6L1 136 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 NATD1Q8N6N6 113 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 PNLDC1Q8NA58 520 aaKnown RBP5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 RBM15BQ8NDT2 890 aaKnown RBP5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 NPRL2Q8WTW4 380 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 TUBGCP3Q96CW5 907 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 MAELQ96JY0 434 aaKnown RBP5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 CLPTM1LQ96KA5 538 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 DDOQ99489 341 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 CHID1Q9BWS9 393 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 POFUT1Q9H488 388 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 GLTPQ9NZD2 209 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 SNX12Q9UMY4 172 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 MYRFQ9Y2G1 1151 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 CAB39Q9Y376 341 aaPredicted RBP5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 CHST2Q9Y4C5 530 aa5.77□□□□□ -1.49
PDLIM1-203ENST00000490391 SORL1Q92673 2214 aa5.76□□□□□ -1.49
PDLIM1-203ENST00000490391 MUC4Q99102 2169 aa5.76□□□□□ -1.49
PDLIM1-203ENST00000490391 A0A1W2PRX2 142 aa5.76□□□□□ -1.49
PDLIM1-203ENST00000490391 C5orf49A4QMS7 147 aa5.76□□□□□ -1.49
PDLIM1-203ENST00000490391 SLC28A1O00337 649 aa5.76□□□□□ -1.49
PDLIM1-203ENST00000490391 HMGN4O00479 90 aa5.76□□□□□ -1.49
PDLIM1-203ENST00000490391 CFLARO15519 480 aa5.76□□□□□ -1.49
PDLIM1-203ENST00000490391 OR2T1O43869 369 aa5.76□□□□□ -1.49
PDLIM1-203ENST00000490391 ENTPD5O75356 428 aa5.76□□□□□ -1.49
PDLIM1-203ENST00000490391 FARS2O95363 451 aaKnown RBP5.76□□□□□ -1.49
PDLIM1-203ENST00000490391 PF4P02776 101 aa5.76□□□□□ -1.49
PDLIM1-203ENST00000490391 NEFHP12036 1026 aa5.76□□□□□ -1.49
PDLIM1-203ENST00000490391 ZNF26P17031 533 aaPredicted RBP5.76□□□□□ -1.49
PDLIM1-203ENST00000490391 CHATP28329 748 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms