RNA–Protein interactions for RNA: ENST00000488227.1

RALY-208, Transcript of RALY heterogeneous nuclear ribonucleoprotein, humanhuman

TSL 3

Gene RALY, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RALY-208ENST00000488227 SRSF1Q07955 248 aaKnown RBP eCLIP12.46□□□□□ -0.41
RALY-208ENST00000488227 CDK5R2Q13319 367 aa12.46□□□□□ -0.41
RALY-208ENST00000488227 PPA1Q15181 289 aa12.46□□□□□ -0.41
RALY-208ENST00000488227 CDSNQ15517 529 aa12.46□□□□□ -0.41
RALY-208ENST00000488227 PCK2Q16822 640 aa12.46□□□□□ -0.41
RALY-208ENST00000488227 C3orf36Q3SXR2 165 aa12.46□□□□□ -0.41
RALY-208ENST00000488227 OR2AJ1Q8NGZ0 328 aa12.46□□□□□ -0.41
RALY-208ENST00000488227 UBE2FQ969M7 185 aa12.46□□□□□ -0.41
RALY-208ENST00000488227 ZMYND19Q96E35 227 aaPredicted RBP12.46□□□□□ -0.41
RALY-208ENST00000488227 DACH2Q96NX9 599 aa12.46□□□□□ -0.41
RALY-208ENST00000488227 MED18Q9BUE0 208 aa12.46□□□□□ -0.41
RALY-208ENST00000488227 YIPF3Q9GZM5 350 aa12.46□□□□□ -0.41
RALY-208ENST00000488227 TIMM10BQ9Y5J6 103 aa12.46□□□□□ -0.41
RALY-208ENST00000488227 TMEM14AQ9Y6G1 99 aa12.46□□□□□ -0.41
RALY-208ENST00000488227 COMMD3-BMI1R4GMX3 469 aa12.46□□□□□ -0.41
RALY-208ENST00000488227 TUBAL3A6NHL2 446 aa12.45□□□□□ -0.42
RALY-208ENST00000488227 ZNF593O00488 134 aaPredicted RBP12.45□□□□□ -0.42
RALY-208ENST00000488227 PHYHO14832 338 aa12.45□□□□□ -0.42
RALY-208ENST00000488227 WBP4O75554 376 aaKnown RBP12.45□□□□□ -0.42
RALY-208ENST00000488227 SEC14L2O76054 403 aa12.45□□□□□ -0.42
RALY-208ENST00000488227 RAB36O95755 333 aa12.45□□□□□ -0.42
RALY-208ENST00000488227 TFP02787 698 aa12.45□□□□□ -0.42
RALY-208ENST00000488227 MED21Q13503 144 aa12.45□□□□□ -0.42
RALY-208ENST00000488227 GSG1Q2KHT4 349 aa12.45□□□□□ -0.42
RALY-208ENST00000488227 HIKESHIQ53FT3 197 aa12.45□□□□□ -0.42
RALY-208ENST00000488227 KLHL22Q53GT1 634 aa12.45□□□□□ -0.42
RALY-208ENST00000488227 SLC16A9Q7RTY1 509 aa12.45□□□□□ -0.42
RALY-208ENST00000488227 ERI1Q8IV48 349 aaKnown RBP12.45□□□□□ -0.42
RALY-208ENST00000488227 SKA3Q8IX90 412 aa12.45□□□□□ -0.42
RALY-208ENST00000488227 TIGD4Q8IY51 512 aa12.45□□□□□ -0.42
RALY-208ENST00000488227 ALDH16A1Q8IZ83 802 aa12.45□□□□□ -0.42
RALY-208ENST00000488227 LRRC18Q8N456 261 aa12.45□□□□□ -0.42
RALY-208ENST00000488227 ZNF511Q8NB15 262 aa12.45□□□□□ -0.42
RALY-208ENST00000488227 GJC3Q8NFK1 279 aa12.45□□□□□ -0.42
RALY-208ENST00000488227 APH1BQ8WW43 257 aa12.45□□□□□ -0.42
RALY-208ENST00000488227 CNBD2Q96M20 576 aa12.45□□□□□ -0.42
RALY-208ENST00000488227 ZNF416Q9BWM5 594 aa12.45□□□□□ -0.42
RALY-208ENST00000488227 C1orf198Q9H425 327 aa12.45□□□□□ -0.42
RALY-208ENST00000488227 NPDC1Q9NQX5 325 aaPredicted RBP12.45□□□□□ -0.42
RALY-208ENST00000488227 MRPL22Q9NWU5 206 aaKnown RBP12.45□□□□□ -0.42
RALY-208ENST00000488227 CYB5R1Q9UHQ9 305 aa12.45□□□□□ -0.42
RALY-208ENST00000488227 SLC25A15Q9Y619 301 aa12.45□□□□□ -0.42
RALY-208ENST00000488227 MPZL1O95297 269 aa12.44□□□□□ -0.42
RALY-208ENST00000488227 DBTP11182 482 aaKnown RBP12.44□□□□□ -0.42
RALY-208ENST00000488227 CD79AP11912 226 aa12.44□□□□□ -0.42
RALY-208ENST00000488227 CBR1P16152 277 aa12.44□□□□□ -0.42
RALY-208ENST00000488227 ACTC1P68032 377 aa12.44□□□□□ -0.42
RALY-208ENST00000488227 ACTA1P68133 377 aa12.44□□□□□ -0.42
RALY-208ENST00000488227 PLP2Q04941 152 aa12.44□□□□□ -0.42
RALY-208ENST00000488227 ZNF91Q05481 1191 aa12.44□□□□□ -0.42
RALY-208ENST00000488227 RAB40BQ12829 278 aa12.44□□□□□ -0.42
RALY-208ENST00000488227 ENDOGQ14249 297 aaKnown RBP12.44□□□□□ -0.42
RALY-208ENST00000488227 TSC22D1Q15714 1073 aa12.44□□□□□ -0.42
RALY-208ENST00000488227 SLC18B1Q6NT16 456 aa12.44□□□□□ -0.42
RALY-208ENST00000488227 RHOUQ7L0Q8 258 aa12.44□□□□□ -0.42
RALY-208ENST00000488227 BCDIN3DQ7Z5W3 292 aaKnown RBP12.44□□□□□ -0.42
RALY-208ENST00000488227 WDR31Q8NA23 367 aa12.44□□□□□ -0.42
RALY-208ENST00000488227 OR52N5Q8NH56 324 aa12.44□□□□□ -0.42
RALY-208ENST00000488227 CNIH3Q8TBE1 160 aa12.44□□□□□ -0.42
RALY-208ENST00000488227 ZNRF4Q8WWF5 429 aa12.44□□□□□ -0.42
RALY-208ENST00000488227 IPCEF1Q8WWN9 437 aaPredicted RBP12.44□□□□□ -0.42
RALY-208ENST00000488227 RNFT2Q96EX2 444 aa12.44□□□□□ -0.42
RALY-208ENST00000488227 MRPL48Q96GC5 212 aaKnown RBP12.44□□□□□ -0.42
RALY-208ENST00000488227 FOXN4Q96NZ1 517 aa12.44□□□□□ -0.42
RALY-208ENST00000488227 SH3GL3Q99963 347 aa12.44□□□□□ -0.42
RALY-208ENST00000488227 RNF121Q9H920 327 aa12.44□□□□□ -0.42
RALY-208ENST00000488227 WDR76Q9H967 626 aa12.44□□□□□ -0.42
RALY-208ENST00000488227 EMC7Q9NPA0 242 aa12.44□□□□□ -0.42
RALY-208ENST00000488227 PLCXD1Q9NUJ7 323 aa12.44□□□□□ -0.42
RALY-208ENST00000488227 MRPS18AQ9NVS2 196 aaKnown RBP12.44□□□□□ -0.42
RALY-208ENST00000488227 SCN3BQ9NY72 215 aa12.44□□□□□ -0.42
RALY-208ENST00000488227 B3GNT2Q9NY97 397 aa12.44□□□□□ -0.42
RALY-208ENST00000488227 CNOT2Q9NZN8 540 aaKnown RBP12.44□□□□□ -0.42
RALY-208ENST00000488227 CRNNQ9UBG3 495 aaPredicted RBP12.44□□□□□ -0.42
RALY-208ENST00000488227 ASH2LQ9UBL3 628 aa12.44□□□□□ -0.42
RALY-208ENST00000488227 ATPIF1Q9UII2 106 aa12.44□□□□□ -0.42
RALY-208ENST00000488227 BLOC1S6Q9UL45 172 aa12.44□□□□□ -0.42
RALY-208ENST00000488227 LRRC42Q9Y546 428 aa12.44□□□□□ -0.42
RALY-208ENST00000488227 UBR5O95071 2799 aaPredicted RBP12.44□□□□□ -0.42
RALY-208ENST00000488227 IQCMA0A1B0GVH7 501 aa12.43□□□□□ -0.42
RALY-208ENST00000488227 EFCAB10A6NFE3 127 aa12.43□□□□□ -0.42
RALY-208ENST00000488227 TVP23AA6NH52 213 aa12.43□□□□□ -0.42
RALY-208ENST00000488227 GOSR1O95249 250 aa12.43□□□□□ -0.42
RALY-208ENST00000488227 FADS2O95864 444 aaKnown RBP12.43□□□□□ -0.42
RALY-208ENST00000488227 GPANK1O95872 356 aa12.43□□□□□ -0.42
RALY-208ENST00000488227 HLA-HP01893 362 aa12.43□□□□□ -0.42
RALY-208ENST00000488227 SPARCP09486 303 aa12.43□□□□□ -0.42
RALY-208ENST00000488227 SBK2P0C263 348 aa12.43□□□□□ -0.42
RALY-208ENST00000488227 CCDC159P0C7I6 412 aa12.43□□□□□ -0.42
RALY-208ENST00000488227 OR2T7P0C7T2 308 aa12.43□□□□□ -0.42
RALY-208ENST00000488227 COX5BP10606 129 aa12.43□□□□□ -0.42
RALY-208ENST00000488227 EPXP11678 715 aa12.43□□□□□ -0.42
RALY-208ENST00000488227 IGFBP2P18065 325 aa12.43□□□□□ -0.42
RALY-208ENST00000488227 KIR2DL3P43628 341 aa12.43□□□□□ -0.42
RALY-208ENST00000488227 NUDT6P53370 316 aa12.43□□□□□ -0.42
RALY-208ENST00000488227 RAB1AP62820 205 aa12.43□□□□□ -0.42
RALY-208ENST00000488227 ECH1Q13011 328 aa12.43□□□□□ -0.42
RALY-208ENST00000488227 TAB1Q15750 504 aa12.43□□□□□ -0.42
RALY-208ENST00000488227 MEP1BQ16820 701 aa12.43□□□□□ -0.42
RALY-208ENST00000488227 C6orf141Q5SZD1 244 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms