RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 WRBO00258 174 aa2.36□□□□□ -2.03
TTC3-220ENST00000487711 SPOPO43791 374 aa2.36□□□□□ -2.03
TTC3-220ENST00000487711 AIREO43918 545 aa2.36□□□□□ -2.03
TTC3-220ENST00000487711 NEMFO60524 1076 aa2.36□□□□□ -2.03
TTC3-220ENST00000487711 SS18L1O75177 396 aaPredicted RBP2.36□□□□□ -2.03
TTC3-220ENST00000487711 SUPT3HO75486 399 aa2.36□□□□□ -2.03
TTC3-220ENST00000487711 WBP4O75554 376 aaKnown RBP2.36□□□□□ -2.03
TTC3-220ENST00000487711 DIRAS1O95057 198 aa2.36□□□□□ -2.03
TTC3-220ENST00000487711 STAG3L3P0CL85 134 aa2.36□□□□□ -2.03
TTC3-220ENST00000487711 PPIAL4FP0DN26 164 aa2.36□□□□□ -2.03
TTC3-220ENST00000487711 ZNF823P16415 610 aa2.36□□□□□ -2.03
TTC3-220ENST00000487711 CHMLP26374 656 aa2.36□□□□□ -2.03
TTC3-220ENST00000487711 GNA11P29992 359 aa2.36□□□□□ -2.03
TTC3-220ENST00000487711 DDOSTP39656 456 aa2.36□□□□□ -2.03
TTC3-220ENST00000487711 CCT6AP40227 531 aaKnown RBP2.36□□□□□ -2.03
TTC3-220ENST00000487711 RPL13AP40429 203 aaKnown RBP2.36□□□□□ -2.03
TTC3-220ENST00000487711 EPS15P42566 896 aa2.36□□□□□ -2.03
TTC3-220ENST00000487711 MNAT1P51948 309 aa2.36□□□□□ -2.03
TTC3-220ENST00000487711 TGM3Q08188 693 aa2.36□□□□□ -2.03
TTC3-220ENST00000487711 SMARCB1Q12824 385 aa2.36□□□□□ -2.03
TTC3-220ENST00000487711 IL18Q14116 193 aa2.36□□□□□ -2.03
TTC3-220ENST00000487711 VGLL4Q14135 290 aa2.36□□□□□ -2.03
TTC3-220ENST00000487711 SHHQ15465 462 aa2.36□□□□□ -2.03
TTC3-220ENST00000487711 SPANXN2Q5MJ10 180 aa2.36□□□□□ -2.03
TTC3-220ENST00000487711 OTUD6AQ7L8S5 288 aa2.36□□□□□ -2.03
TTC3-220ENST00000487711 TMCO2Q7Z6W1 182 aaPredicted RBP2.36□□□□□ -2.03
TTC3-220ENST00000487711 ZNF546Q86UE3 836 aa2.36□□□□□ -2.03
TTC3-220ENST00000487711 EGFL6Q8IUX8 553 aa2.36□□□□□ -2.03
TTC3-220ENST00000487711 ACOT4Q8N9L9 421 aa2.36□□□□□ -2.03
TTC3-220ENST00000487711 BBOF1Q8ND07 529 aa2.36□□□□□ -2.03
TTC3-220ENST00000487711 OR4C5Q8NGB2 326 aa2.36□□□□□ -2.03
TTC3-220ENST00000487711 UFD1Q92890 307 aa2.36□□□□□ -2.03
TTC3-220ENST00000487711 ASB9Q96DX5 294 aa2.36□□□□□ -2.03
TTC3-220ENST00000487711 GSDMAQ96QA5 445 aa2.36□□□□□ -2.03
TTC3-220ENST00000487711 TAAR1Q96RJ0 339 aa2.36□□□□□ -2.03
TTC3-220ENST00000487711 LRRN3Q9H3W5 708 aa2.36□□□□□ -2.03
TTC3-220ENST00000487711 LHX9Q9NQ69 397 aa2.36□□□□□ -2.03
TTC3-220ENST00000487711 PCYOX1Q9UHG3 505 aa2.36□□□□□ -2.03
TTC3-220ENST00000487711 C1orf167Q5SNV9 1468 aa2.36□□□□□ -2.03
TTC3-220ENST00000487711 ARAP2Q8WZ64 1704 aa2.36□□□□□ -2.03
TTC3-220ENST00000487711 RGPD2P0DJD1 1756 aa2.36□□□□□ -2.03
TTC3-220ENST00000487711 LAMB2P55268 1798 aa2.36□□□□□ -2.03
TTC3-220ENST00000487711 ADCY9O60503 1353 aa2.36□□□□□ -2.03
TTC3-220ENST00000487711 PALLDQ8WX93 1383 aa2.36□□□□□ -2.03
TTC3-220ENST00000487711 MED23Q9ULK4 1368 aa2.36□□□□□ -2.03
TTC3-220ENST00000487711 LAMA4Q16363 1823 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 WNK3Q9BYP7 1800 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 NHSL1Q5SYE7 1610 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 TNS2Q63HR2 1409 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 MYH7P12883 1935 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 PXDNQ92626 1479 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 IGLV11-55A0A075B6I3 123 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 A0A1B0GTQ1 180 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 ERICH4A6NGS2 130 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 ERVV-1B6SEH8 477 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 C12orf77C9JDV5 145 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 M0QX08 132 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 PRKAB2O43741 272 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 CST1P01037 141 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 NCK1P16333 377 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 MSNP26038 577 aaKnown RBP2.35□□□□□ -2.03
TTC3-220ENST00000487711 IL12AP29459 219 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 CXCL5P42830 114 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 SYKP43405 635 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 CDKN1BP46527 198 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 ETV1P50549 477 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 ZNF136P52737 540 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 EIF3EP60228 445 aaKnown RBP2.35□□□□□ -2.03
TTC3-220ENST00000487711 KRTAP10-1P60331 282 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 REG3AQ06141 175 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 TMEM183BQ1AE95 376 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 DMRTC1Q5HYR2 192 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 C16orf87Q6PH81 154 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 ABHD12BQ7Z5M8 362 aaPredicted RBP2.35□□□□□ -2.03
TTC3-220ENST00000487711 DHDDSQ86SQ9 333 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 TRIM69Q86WT6 500 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 TGIF2LXQ8IUE1 241 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 TMEM183AQ8IXX5 376 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 FNDC5Q8NAU1 212 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 MFSD9Q8NBP5 474 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 OR1N2Q8NGR9 330 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 OR2L8Q8NGY9 312 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 KIR2DL5BQ8NHK3 375 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 KCNG3Q8TAE7 436 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 ACOT11Q8WXI4 607 aaPredicted RBP2.35□□□□□ -2.03
TTC3-220ENST00000487711 UBE2E3Q969T4 207 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 MCUR1Q96AQ8 359 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 TSNARE1Q96NA8 513 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 RPRD1AQ96P16 312 aaPredicted RBP2.35□□□□□ -2.03
TTC3-220ENST00000487711 CLCC1Q96S66 551 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 C11orf70Q9BRQ4 267 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 LLPHQ9BRT6 129 aaKnown RBP2.35□□□□□ -2.03
TTC3-220ENST00000487711 RIOK2Q9BVS4 552 aaKnown RBP2.35□□□□□ -2.03
TTC3-220ENST00000487711 RANBP3Q9H6Z4 567 aaPredicted RBP2.35□□□□□ -2.03
TTC3-220ENST00000487711 TMEM185BQ9H7F4 350 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 AUNIPQ9H7T9 357 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 NTN4Q9HB63 628 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 SLC2A8Q9NY64 477 aa2.35□□□□□ -2.03
TTC3-220ENST00000487711 ZNF282Q9UDV7 671 aaPredicted RBP2.35□□□□□ -2.03
TTC3-220ENST00000487711 NPTNQ9Y639 398 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms