RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 IGHV1-8P0DP01 117 aa2.33□□□□□ -2.04
HMGB1P36-201ENST00000487709 DTYMKP23919 212 aa2.33□□□□□ -2.04
HMGB1P36-201ENST00000487709 DCKP27707 260 aa2.33□□□□□ -2.04
HMGB1P36-201ENST00000487709 MAS1LP35410 378 aa2.33□□□□□ -2.04
HMGB1P36-201ENST00000487709 CSNK1EP49674 416 aaKnown RBP2.33□□□□□ -2.04
HMGB1P36-201ENST00000487709 C21orf59P57076 290 aa2.33□□□□□ -2.04
HMGB1P36-201ENST00000487709 UBE2NP61088 152 aaKnown RBP2.33□□□□□ -2.04
HMGB1P36-201ENST00000487709 STXBP1P61764 594 aaKnown RBP2.33□□□□□ -2.04
HMGB1P36-201ENST00000487709 SRSF5Q13243 272 aaKnown RBP2.33□□□□□ -2.04
HMGB1P36-201ENST00000487709 MADCAM1Q13477 382 aa2.33□□□□□ -2.04
HMGB1P36-201ENST00000487709 PSMD5Q16401 504 aa2.33□□□□□ -2.04
HMGB1P36-201ENST00000487709 POU2AF1Q16633 256 aa2.33□□□□□ -2.04
HMGB1P36-201ENST00000487709 HSP90AB3PQ58FF7 597 aa2.33□□□□□ -2.04
HMGB1P36-201ENST00000487709 FAM78AQ5JUQ0 283 aa2.33□□□□□ -2.04
HMGB1P36-201ENST00000487709 FBXW9Q5XUX1 488 aa2.33□□□□□ -2.04
HMGB1P36-201ENST00000487709 C22orf42Q6IC83 251 aa2.33□□□□□ -2.04
HMGB1P36-201ENST00000487709 METAP1DQ6UB28 335 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P36-201ENST00000487709 SASS6Q6UVJ0 657 aa2.33□□□□□ -2.04
HMGB1P36-201ENST00000487709 IGFL3Q6UXB1 125 aa2.33□□□□□ -2.04
HMGB1P36-201ENST00000487709 CALHM1Q8IU99 346 aa2.33□□□□□ -2.04
HMGB1P36-201ENST00000487709 OR5B3Q8NH48 314 aa2.33□□□□□ -2.04
HMGB1P36-201ENST00000487709 ELMO1Q92556 727 aa2.33□□□□□ -2.04
HMGB1P36-201ENST00000487709 GSDMAQ96QA5 445 aa2.33□□□□□ -2.04
HMGB1P36-201ENST00000487709 VPS37BQ9H9H4 285 aa2.33□□□□□ -2.04
HMGB1P36-201ENST00000487709 NEK6Q9HC98 313 aa2.33□□□□□ -2.04
HMGB1P36-201ENST00000487709 ZNF160Q9HCG1 818 aa2.33□□□□□ -2.04
HMGB1P36-201ENST00000487709 FGF20Q9NP95 211 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P36-201ENST00000487709 ZDHHC4Q9NPG8 344 aa2.33□□□□□ -2.04
HMGB1P36-201ENST00000487709 DDX19AQ9NUU7 478 aaKnown RBP2.33□□□□□ -2.04
HMGB1P36-201ENST00000487709 GPATCH2LQ9NWQ4 482 aa2.33□□□□□ -2.04
HMGB1P36-201ENST00000487709 ZNRD1Q9P1U0 126 aa2.33□□□□□ -2.04
HMGB1P36-201ENST00000487709 LGALS13Q9UHV8 139 aa2.33□□□□□ -2.04
HMGB1P36-201ENST00000487709 HYOU1Q9Y4L1 999 aa2.33□□□□□ -2.04
HMGB1P36-201ENST00000487709 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.33□□□□□ -2.04
HMGB1P36-201ENST00000487709 IGLV1-50A0A075B6I6 118 aa2.32□□□□□ -2.04
HMGB1P36-201ENST00000487709 H0YHG0 523 aa2.32□□□□□ -2.04
HMGB1P36-201ENST00000487709 FKBP6O75344 327 aa2.32□□□□□ -2.04
HMGB1P36-201ENST00000487709 SERPINA5P05154 406 aa2.32□□□□□ -2.04
HMGB1P36-201ENST00000487709 MRPL3P09001 348 aaKnown RBP2.32□□□□□ -2.04
HMGB1P36-201ENST00000487709 UBTFL6P0CB48 400 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P36-201ENST00000487709 IGFBP3P17936 291 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P36-201ENST00000487709 HMOX2P30519 316 aa2.32□□□□□ -2.04
HMGB1P36-201ENST00000487709 AQP2P41181 271 aa2.32□□□□□ -2.04
HMGB1P36-201ENST00000487709 SYKP43405 635 aa2.32□□□□□ -2.04
HMGB1P36-201ENST00000487709 EIF3EP60228 445 aaKnown RBP2.32□□□□□ -2.04
HMGB1P36-201ENST00000487709 IFT88Q13099 833 aa2.32□□□□□ -2.04
HMGB1P36-201ENST00000487709 IDI1Q13907 227 aa2.32□□□□□ -2.04
HMGB1P36-201ENST00000487709 OR7A5Q15622 319 aa2.32□□□□□ -2.04
HMGB1P36-201ENST00000487709 ARL9Q6T311 187 aa2.32□□□□□ -2.04
HMGB1P36-201ENST00000487709 CMC1Q7Z7K0 106 aa2.32□□□□□ -2.04
HMGB1P36-201ENST00000487709 STPG2Q8N412 459 aa2.32□□□□□ -2.04
HMGB1P36-201ENST00000487709 HSD17B11Q8NBQ5 300 aa2.32□□□□□ -2.04
HMGB1P36-201ENST00000487709 FBXL13Q8NEE6 735 aa2.32□□□□□ -2.04
HMGB1P36-201ENST00000487709 NOXO1Q8NFA2 376 aa2.32□□□□□ -2.04
HMGB1P36-201ENST00000487709 OR10G2Q8NGC3 310 aa2.32□□□□□ -2.04
HMGB1P36-201ENST00000487709 OR5W2Q8NH69 310 aa2.32□□□□□ -2.04
HMGB1P36-201ENST00000487709 RNF139Q8WU17 664 aa2.32□□□□□ -2.04
HMGB1P36-201ENST00000487709 GALNT14Q96FL9 552 aa2.32□□□□□ -2.04
HMGB1P36-201ENST00000487709 LINC00477Q96M19 166 aa2.32□□□□□ -2.04
HMGB1P36-201ENST00000487709 CAMK2N2Q96S95 79 aa2.32□□□□□ -2.04
HMGB1P36-201ENST00000487709 CWH43Q9H720 699 aa2.32□□□□□ -2.04
HMGB1P36-201ENST00000487709 SYNDIG1Q9H7V2 258 aa2.32□□□□□ -2.04
HMGB1P36-201ENST00000487709 RAB20Q9NX57 234 aa2.32□□□□□ -2.04
HMGB1P36-201ENST00000487709 LYARQ9NX58 379 aaKnown RBP2.32□□□□□ -2.04
HMGB1P36-201ENST00000487709 CCDC59Q9P031 241 aaKnown RBP2.32□□□□□ -2.04
HMGB1P36-201ENST00000487709 ZNF222Q9UK12 451 aa2.32□□□□□ -2.04
HMGB1P36-201ENST00000487709 MRPS18BQ9Y676 258 aaKnown RBP2.32□□□□□ -2.04
HMGB1P36-201ENST00000487709 MN1Q10571 1320 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P36-201ENST00000487709 DOCK9Q9BZ29 2069 aa2.32□□□□□ -2.04
HMGB1P36-201ENST00000487709 IGHV5-10-1A0A0J9YXX1 117 aa2.31□□□□□ -2.04
HMGB1P36-201ENST00000487709 SGK1O00141 431 aa2.31□□□□□ -2.04
HMGB1P36-201ENST00000487709 WISP3O95389 354 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P36-201ENST00000487709 BCHEP06276 602 aa2.31□□□□□ -2.04
HMGB1P36-201ENST00000487709 GNAO1P09471 354 aa2.31□□□□□ -2.04
HMGB1P36-201ENST00000487709 CT62P0C5K7 136 aa2.31□□□□□ -2.04
HMGB1P36-201ENST00000487709 OR5H8P0DN80 308 aa2.31□□□□□ -2.04
HMGB1P36-201ENST00000487709 MYL2P10916 166 aa2.31□□□□□ -2.04
HMGB1P36-201ENST00000487709 SFTPCP11686 197 aa2.31□□□□□ -2.04
HMGB1P36-201ENST00000487709 ZNF250P15622 560 aa2.31□□□□□ -2.04
HMGB1P36-201ENST00000487709 TCN2P20062 427 aa2.31□□□□□ -2.04
HMGB1P36-201ENST00000487709 GTF2E2P29084 291 aaKnown RBP2.31□□□□□ -2.04
HMGB1P36-201ENST00000487709 CEACAM3P40198 252 aa2.31□□□□□ -2.04
HMGB1P36-201ENST00000487709 MRPL19P49406 292 aaKnown RBP2.31□□□□□ -2.04
HMGB1P36-201ENST00000487709 TGM3Q08188 693 aa2.31□□□□□ -2.04
HMGB1P36-201ENST00000487709 CDH17Q12864 832 aa2.31□□□□□ -2.04
HMGB1P36-201ENST00000487709 MERTKQ12866 999 aa2.31□□□□□ -2.04
HMGB1P36-201ENST00000487709 EIF4EBP1Q13541 118 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P36-201ENST00000487709 RSPO1Q2MKA7 263 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P36-201ENST00000487709 PGGHGQ32M88 737 aa2.31□□□□□ -2.04
HMGB1P36-201ENST00000487709 C5orf47Q569G3 176 aa2.31□□□□□ -2.04
HMGB1P36-201ENST00000487709 LY6G6FQ5SQ64 297 aa2.31□□□□□ -2.04
HMGB1P36-201ENST00000487709 PRAMEF20Q5VT98 475 aa2.31□□□□□ -2.04
HMGB1P36-201ENST00000487709 REEP3Q6NUK4 255 aa2.31□□□□□ -2.04
HMGB1P36-201ENST00000487709 EIF3MQ7L2H7 374 aaKnown RBP2.31□□□□□ -2.04
HMGB1P36-201ENST00000487709 SSX9Q7RTT3 188 aa2.31□□□□□ -2.04
HMGB1P36-201ENST00000487709 ABHD12BQ7Z5M8 362 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P36-201ENST00000487709 SNX20Q7Z614 316 aa2.31□□□□□ -2.04
HMGB1P36-201ENST00000487709 METTL13Q8N6R0 699 aa2.31□□□□□ -2.04
HMGB1P36-201ENST00000487709 OR52K2Q8NGK3 314 aa2.31□□□□□ -2.04
HMGB1P36-201ENST00000487709 UBALD1Q8TB05 177 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms