RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 SOCS2O14508 198 aa9.8□□□□□ -0.84
SPEN-205ENST00000487496 LILRA1O75019 489 aa9.8□□□□□ -0.84
SPEN-205ENST00000487496 FAM107AO95990 144 aa9.8□□□□□ -0.84
SPEN-205ENST00000487496 FABP3P05413 133 aa9.8□□□□□ -0.84
SPEN-205ENST00000487496 TACSTD2P09758 323 aa9.8□□□□□ -0.84
SPEN-205ENST00000487496 APEHP13798 732 aaKnown RBP9.8□□□□□ -0.84
SPEN-205ENST00000487496 ZNF16P17020 682 aaPredicted RBP9.8□□□□□ -0.84
SPEN-205ENST00000487496 COL8A2P25067 703 aa9.8□□□□□ -0.84
SPEN-205ENST00000487496 SDHAP31040 664 aa9.8□□□□□ -0.84
SPEN-205ENST00000487496 KLF3P57682 345 aaPredicted RBP9.8□□□□□ -0.84
SPEN-205ENST00000487496 SPIBQ01892 262 aa9.8□□□□□ -0.84
SPEN-205ENST00000487496 KRR1Q13601 381 aaKnown RBP9.8□□□□□ -0.84
SPEN-205ENST00000487496 NKPD1Q17RQ9 610 aa9.8□□□□□ -0.84
SPEN-205ENST00000487496 ALKBH6Q3KRA9 238 aa9.8□□□□□ -0.84
SPEN-205ENST00000487496 ELFN2Q5R3F8 820 aa9.8□□□□□ -0.84
SPEN-205ENST00000487496 ZNF774Q6NX45 483 aa9.8□□□□□ -0.84
SPEN-205ENST00000487496 DPY19L2P2Q6ZN68 376 aa9.8□□□□□ -0.84
SPEN-205ENST00000487496 MSI2Q96DH6 328 aaKnown RBP9.8□□□□□ -0.84
SPEN-205ENST00000487496 NSL1Q96IY1 281 aa9.8□□□□□ -0.84
SPEN-205ENST00000487496 WACQ9BTA9 647 aa9.8□□□□□ -0.84
SPEN-205ENST00000487496 SYT4Q9H2B2 425 aa9.8□□□□□ -0.84
SPEN-205ENST00000487496 SLCO1C1Q9NYB5 712 aa9.8□□□□□ -0.84
SPEN-205ENST00000487496 VSX1Q9NZR4 365 aaPredicted RBP9.8□□□□□ -0.84
SPEN-205ENST00000487496 EIF3KQ9UBQ5 218 aaKnown RBP9.8□□□□□ -0.84
SPEN-205ENST00000487496 IER3IP1Q9Y5U9 82 aa9.8□□□□□ -0.84
SPEN-205ENST00000487496 CHD3Q12873 2000 aaKnown RBP9.79□□□□□ -0.84
SPEN-205ENST00000487496 C17orf100A8MU93 164 aa9.79□□□□□ -0.84
SPEN-205ENST00000487496 DYNC1I1O14576 645 aa9.79□□□□□ -0.84
SPEN-205ENST00000487496 IMPA2O14732 288 aa9.79□□□□□ -0.84
SPEN-205ENST00000487496 OR10H3O60404 316 aa9.79□□□□□ -0.84
SPEN-205ENST00000487496 SLC16A7O60669 478 aa9.79□□□□□ -0.84
SPEN-205ENST00000487496 KHDRBS3O75525 346 aaKnown RBP9.79□□□□□ -0.84
SPEN-205ENST00000487496 TXNDC12O95881 172 aa9.79□□□□□ -0.84
SPEN-205ENST00000487496 IGHV3-13P01766 116 aa9.79□□□□□ -0.84
SPEN-205ENST00000487496 RRM2P31350 389 aa9.79□□□□□ -0.84
SPEN-205ENST00000487496 MAGEB1P43366 347 aa9.79□□□□□ -0.84
SPEN-205ENST00000487496 RPS6KA3P51812 740 aa9.79□□□□□ -0.84
SPEN-205ENST00000487496 TRIP10Q15642 601 aa9.79□□□□□ -0.84
SPEN-205ENST00000487496 RFX4Q33E94 735 aa9.79□□□□□ -0.84
SPEN-205ENST00000487496 CHRFAM7AQ494W8 412 aa9.79□□□□□ -0.84
SPEN-205ENST00000487496 SMARCD3Q6STE5 483 aa9.79□□□□□ -0.84
SPEN-205ENST00000487496 UNQ6126/PRO20091Q6UXV3 157 aa9.79□□□□□ -0.84
SPEN-205ENST00000487496 CYP2R1Q6VVX0 501 aa9.79□□□□□ -0.84
SPEN-205ENST00000487496 PTCHD4Q6ZW05 846 aa9.79□□□□□ -0.84
SPEN-205ENST00000487496 ADCK1Q86TW2 530 aa9.79□□□□□ -0.84
SPEN-205ENST00000487496 CCDC197Q8NCU1 140 aa9.79□□□□□ -0.84
SPEN-205ENST00000487496 RDH5Q92781 318 aa9.79□□□□□ -0.84
SPEN-205ENST00000487496 MARS2Q96GW9 593 aaKnown RBP9.79□□□□□ -0.84
SPEN-205ENST00000487496 NUAK2Q9H093 628 aa9.79□□□□□ -0.84
SPEN-205ENST00000487496 CHODLQ9H9P2 273 aa9.79□□□□□ -0.84
SPEN-205ENST00000487496 HINT3Q9NQE9 182 aaKnown RBP9.79□□□□□ -0.84
SPEN-205ENST00000487496 TMEM160Q9NX00 188 aa9.79□□□□□ -0.84
SPEN-205ENST00000487496 ACTR3BQ9P1U1 418 aa9.79□□□□□ -0.84
SPEN-205ENST00000487496 GPR160Q9UJ42 338 aa9.79□□□□□ -0.84
SPEN-205ENST00000487496 COA3Q9Y2R0 106 aaPredicted RBP9.79□□□□□ -0.84
SPEN-205ENST00000487496 LOC100289279A0A1B0GTE1 492 aa9.78□□□□□ -0.84
SPEN-205ENST00000487496 LMX1BO60663 402 aa9.78□□□□□ -0.84
SPEN-205ENST00000487496 ICMTO60725 284 aa9.78□□□□□ -0.84
SPEN-205ENST00000487496 NCR1O76036 304 aa9.78□□□□□ -0.84
SPEN-205ENST00000487496 MPZL1O95297 269 aa9.78□□□□□ -0.84
SPEN-205ENST00000487496 PPP1R3DO95685 299 aa9.78□□□□□ -0.84
SPEN-205ENST00000487496 NGFP01138 241 aa9.78□□□□□ -0.84
SPEN-205ENST00000487496 T-ENOLP0DO92 83 aa9.78□□□□□ -0.84
SPEN-205ENST00000487496 ATP6V1B2P21281 511 aa9.78□□□□□ -0.84
SPEN-205ENST00000487496 ACHEP22303 614 aa9.78□□□□□ -0.84
SPEN-205ENST00000487496 FPR3P25089 353 aa9.78□□□□□ -0.84
SPEN-205ENST00000487496 GCH1P30793 250 aa9.78□□□□□ -0.84
SPEN-205ENST00000487496 IFNGR2P38484 337 aa9.78□□□□□ -0.84
SPEN-205ENST00000487496 MPV17P39210 176 aa9.78□□□□□ -0.84
SPEN-205ENST00000487496 CDKN2AP42771 156 aaKnown RBP9.78□□□□□ -0.84
SPEN-205ENST00000487496 CHN2P52757 468 aa9.78□□□□□ -0.84
SPEN-205ENST00000487496 MRPS11P82912 194 aaKnown RBP9.78□□□□□ -0.84
SPEN-205ENST00000487496 GLO1Q04760 184 aa9.78□□□□□ -0.84
SPEN-205ENST00000487496 SCRN3Q0VDG4 424 aa9.78□□□□□ -0.84
SPEN-205ENST00000487496 MOGQ16653 247 aa9.78□□□□□ -0.84
SPEN-205ENST00000487496 ZNF718Q3SXZ3 478 aa9.78□□□□□ -0.84
SPEN-205ENST00000487496 SPATA46Q5T0L3 261 aa9.78□□□□□ -0.84
SPEN-205ENST00000487496 OTPQ5XKR4 325 aa9.78□□□□□ -0.84
SPEN-205ENST00000487496 C1orf94Q6P1W5 598 aa9.78□□□□□ -0.84
SPEN-205ENST00000487496 TMEM154Q6P9G4 183 aa9.78□□□□□ -0.84
SPEN-205ENST00000487496 RFPL4BQ6ZWI9 263 aa9.78□□□□□ -0.84
SPEN-205ENST00000487496 ZDHHC21Q8IVQ6 265 aa9.78□□□□□ -0.84
SPEN-205ENST00000487496 GLB1L2Q8IW92 636 aa9.78□□□□□ -0.84
SPEN-205ENST00000487496 ARHGAP24Q8N264 748 aa9.78□□□□□ -0.84
SPEN-205ENST00000487496 ABHD4Q8TB40 342 aa9.78□□□□□ -0.84
SPEN-205ENST00000487496 SLC25A40Q8TBP6 338 aa9.78□□□□□ -0.84
SPEN-205ENST00000487496 FANK1Q8TC84 345 aa9.78□□□□□ -0.84
SPEN-205ENST00000487496 KLF14Q8TD94 323 aaPredicted RBP9.78□□□□□ -0.84
SPEN-205ENST00000487496 SNX33Q8WV41 574 aa9.78□□□□□ -0.84
SPEN-205ENST00000487496 HPS1Q92902 700 aa9.78□□□□□ -0.84
SPEN-205ENST00000487496 YIPF5Q969M3 257 aa9.78□□□□□ -0.84
SPEN-205ENST00000487496 C4orf45Q96LM5 186 aa9.78□□□□□ -0.84
SPEN-205ENST00000487496 TSSK2Q96PF2 358 aa9.78□□□□□ -0.84
SPEN-205ENST00000487496 ERMAPQ96PL5 475 aaPredicted RBP9.78□□□□□ -0.84
SPEN-205ENST00000487496 SNX18Q96RF0 628 aa9.78□□□□□ -0.84
SPEN-205ENST00000487496 SOX7Q9BT81 388 aa9.78□□□□□ -0.84
SPEN-205ENST00000487496 OR2J1Q9GZK6 312 aa9.78□□□□□ -0.84
SPEN-205ENST00000487496 OR52D1Q9H346 318 aa9.78□□□□□ -0.84
SPEN-205ENST00000487496 RERGLQ9H628 205 aa9.78□□□□□ -0.84
SPEN-205ENST00000487496 CDC42EP3Q9UKI2 254 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms