RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 NDUFA7O95182 113 aa12.84□□□□□ -0.35
MCF2L-228ENST00000487354 OPN1SWP03999 348 aa12.84□□□□□ -0.35
MCF2L-228ENST00000487354 GDI2P50395 445 aaKnown RBP12.84□□□□□ -0.35
MCF2L-228ENST00000487354 ERFP50548 548 aa12.84□□□□□ -0.35
MCF2L-228ENST00000487354 MMP16P51512 607 aa12.84□□□□□ -0.35
MCF2L-228ENST00000487354 ESCO2Q56NI9 601 aa12.84□□□□□ -0.35
MCF2L-228ENST00000487354 OLFML2AQ68BL7 652 aa12.84□□□□□ -0.35
MCF2L-228ENST00000487354 SLC25A47Q6Q0C1 308 aa12.84□□□□□ -0.35
MCF2L-228ENST00000487354 BRD3OSQ6XYD6 125 aa12.84□□□□□ -0.35
MCF2L-228ENST00000487354 NANOGNBQ7Z5D8 188 aa12.84□□□□□ -0.35
MCF2L-228ENST00000487354 MREGQ8N565 214 aa12.84□□□□□ -0.35
MCF2L-228ENST00000487354 HIPK4Q8NE63 616 aa12.84□□□□□ -0.35
MCF2L-228ENST00000487354 ITLN1Q8WWA0 313 aa12.84□□□□□ -0.35
MCF2L-228ENST00000487354 ZBTB9Q96C00 473 aa12.84□□□□□ -0.35
MCF2L-228ENST00000487354 ZNF607Q96SK3 696 aa12.84□□□□□ -0.35
MCF2L-228ENST00000487354 RBM4BQ9BQ04 359 aaKnown RBP12.84□□□□□ -0.35
MCF2L-228ENST00000487354 CPPED1Q9BRF8 314 aaPredicted RBP12.84□□□□□ -0.35
MCF2L-228ENST00000487354 SLC19A3Q9BZV2 496 aa12.84□□□□□ -0.35
MCF2L-228ENST00000487354 PCDHAC1Q9H158 963 aa12.84□□□□□ -0.35
MCF2L-228ENST00000487354 CCNB1IP1Q9NPC3 277 aa12.84□□□□□ -0.35
MCF2L-228ENST00000487354 EIF3KQ9UBQ5 218 aaKnown RBP12.84□□□□□ -0.35
MCF2L-228ENST00000487354 SLC7A7Q9UM01 511 aa12.84□□□□□ -0.35
MCF2L-228ENST00000487354 RYR3Q15413 4870 aa12.83□□□□□ -0.35
MCF2L-228ENST00000487354 A0A1B0GUS0 222 aa12.83□□□□□ -0.36
MCF2L-228ENST00000487354 TMEM178BH3BS89 294 aa12.83□□□□□ -0.36
MCF2L-228ENST00000487354 CD247P20963 164 aa12.83□□□□□ -0.36
MCF2L-228ENST00000487354 SLC6A2P23975 617 aa12.83□□□□□ -0.36
MCF2L-228ENST00000487354 MDH2P40926 338 aaKnown RBP12.83□□□□□ -0.36
MCF2L-228ENST00000487354 ZMAT1Q5H9K5 638 aa12.83□□□□□ -0.36
MCF2L-228ENST00000487354 FAM27BQ5VT28 67 aa12.83□□□□□ -0.36
MCF2L-228ENST00000487354 TTC33Q6PID6 262 aaPredicted RBP12.83□□□□□ -0.36
MCF2L-228ENST00000487354 BRICD5Q6PL45 260 aa12.83□□□□□ -0.36
MCF2L-228ENST00000487354 BLOC1S3Q6QNY0 202 aa12.83□□□□□ -0.36
MCF2L-228ENST00000487354 C17orf107Q6ZR85 190 aa12.83□□□□□ -0.36
MCF2L-228ENST00000487354 FOXL2NBQ6ZUU3 175 aa12.83□□□□□ -0.36
MCF2L-228ENST00000487354 C1QL4Q86Z23 238 aa12.83□□□□□ -0.36
MCF2L-228ENST00000487354 CLDN22Q8N7P3 220 aa12.83□□□□□ -0.36
MCF2L-228ENST00000487354 OR4F5Q8NH21 305 aa12.83□□□□□ -0.36
MCF2L-228ENST00000487354 MOSPD2Q8NHP6 518 aa12.83□□□□□ -0.36
MCF2L-228ENST00000487354 C10orf82Q8WW14 230 aa12.83□□□□□ -0.36
MCF2L-228ENST00000487354 PAIP2Q9BPZ3 127 aaKnown RBP12.83□□□□□ -0.36
MCF2L-228ENST00000487354 CHIAQ9BZP6 476 aa12.83□□□□□ -0.36
MCF2L-228ENST00000487354 MARCH7Q9H992 704 aa12.83□□□□□ -0.36
MCF2L-228ENST00000487354 SMURF2Q9HAU4 748 aa12.83□□□□□ -0.36
MCF2L-228ENST00000487354 BEX1Q9HBH7 125 aa12.83□□□□□ -0.36
MCF2L-228ENST00000487354 IL20RAQ9UHF4 553 aa12.83□□□□□ -0.36
MCF2L-228ENST00000487354 TRAPPC13A5PLN9 417 aa12.82□□□□□ -0.36
MCF2L-228ENST00000487354 BLOC1S5-TXNDC5H3BN57 136 aa12.82□□□□□ -0.36
MCF2L-228ENST00000487354 TIMM8AO60220 97 aaPredicted RBP12.82□□□□□ -0.36
MCF2L-228ENST00000487354 ERLIN1O75477 346 aa12.82□□□□□ -0.36
MCF2L-228ENST00000487354 SERPINB7O75635 380 aa12.82□□□□□ -0.36
MCF2L-228ENST00000487354 TGDSO95455 350 aa12.82□□□□□ -0.36
MCF2L-228ENST00000487354 TSPAN15O95858 294 aa12.82□□□□□ -0.36
MCF2L-228ENST00000487354 SELEP16581 610 aa12.82□□□□□ -0.36
MCF2L-228ENST00000487354 KITLGP21583 273 aa12.82□□□□□ -0.36
MCF2L-228ENST00000487354 LAP3P28838 519 aa12.82□□□□□ -0.36
MCF2L-228ENST00000487354 AQP2P41181 271 aa12.82□□□□□ -0.36
MCF2L-228ENST00000487354 CRYBA2P53672 197 aa12.82□□□□□ -0.36
MCF2L-228ENST00000487354 ENDOGQ14249 297 aaKnown RBP12.82□□□□□ -0.36
MCF2L-228ENST00000487354 ZNF362Q5T0B9 420 aaPredicted RBP12.82□□□□□ -0.36
MCF2L-228ENST00000487354 FIP1L1Q6UN15 594 aaKnown RBP12.82□□□□□ -0.36
MCF2L-228ENST00000487354 C1orf174Q8IYL3 243 aa12.82□□□□□ -0.36
MCF2L-228ENST00000487354 ANKRD42Q8N9B4 389 aa12.82□□□□□ -0.36
MCF2L-228ENST00000487354 OR2Z1Q8NG97 314 aa12.82□□□□□ -0.36
MCF2L-228ENST00000487354 OR10S1Q8NGN2 331 aa12.82□□□□□ -0.36
MCF2L-228ENST00000487354 PFN4Q8NHR9 129 aa12.82□□□□□ -0.36
MCF2L-228ENST00000487354 NSMAFQ92636 917 aa12.82□□□□□ -0.36
MCF2L-228ENST00000487354 C4orf45Q96LM5 186 aa12.82□□□□□ -0.36
MCF2L-228ENST00000487354 CCT8L2Q96SF2 557 aa12.82□□□□□ -0.36
MCF2L-228ENST00000487354 SSBP3Q9BWW4 388 aaPredicted RBP12.82□□□□□ -0.36
MCF2L-228ENST00000487354 GCM1Q9NP62 436 aa12.82□□□□□ -0.36
MCF2L-228ENST00000487354 KCNK9Q9NPC2 374 aa12.82□□□□□ -0.36
MCF2L-228ENST00000487354 C20orf141Q9NUB4 165 aa12.82□□□□□ -0.36
MCF2L-228ENST00000487354 SLC13A4Q9UKG4 626 aa12.82□□□□□ -0.36
MCF2L-228ENST00000487354 A0A1W2PRG6 482 aa12.81□□□□□ -0.36
MCF2L-228ENST00000487354 CLPSL1A2RUU4 121 aa12.81□□□□□ -0.36
MCF2L-228ENST00000487354 MCIDASD6RGH6 385 aa12.81□□□□□ -0.36
MCF2L-228ENST00000487354 M0QZ24 198 aa12.81□□□□□ -0.36
MCF2L-228ENST00000487354 ZNF205O95201 554 aa12.81□□□□□ -0.36
MCF2L-228ENST00000487354 SCG5P05408 212 aa12.81□□□□□ -0.36
MCF2L-228ENST00000487354 CST2P09228 141 aa12.81□□□□□ -0.36
MCF2L-228ENST00000487354 UMPSP11172 480 aa12.81□□□□□ -0.36
MCF2L-228ENST00000487354 PPIBP23284 216 aaKnown RBP12.81□□□□□ -0.36
MCF2L-228ENST00000487354 DAP3P51398 398 aaKnown RBP12.81□□□□□ -0.36
MCF2L-228ENST00000487354 SELPLGQ14242 412 aa12.81□□□□□ -0.36
MCF2L-228ENST00000487354 SGCAQ16586 387 aa12.81□□□□□ -0.36
MCF2L-228ENST00000487354 LRRN1Q6UXK5 716 aa12.81□□□□□ -0.36
MCF2L-228ENST00000487354 DLEU7Q6UYE1 221 aa12.81□□□□□ -0.36
MCF2L-228ENST00000487354 Q6YL49 198 aa12.81□□□□□ -0.36
MCF2L-228ENST00000487354 KLBQ86Z14 1044 aa12.81□□□□□ -0.36
MCF2L-228ENST00000487354 VANGL1Q8TAA9 524 aaPredicted RBP12.81□□□□□ -0.36
MCF2L-228ENST00000487354 RAB40AQ8WXH6 277 aa12.81□□□□□ -0.36
MCF2L-228ENST00000487354 TAMM41Q96BW9 452 aa12.81□□□□□ -0.36
MCF2L-228ENST00000487354 SPDL1Q96EA4 605 aa12.81□□□□□ -0.36
MCF2L-228ENST00000487354 MPP4Q96JB8 637 aa12.81□□□□□ -0.36
MCF2L-228ENST00000487354 OR2V2Q96R30 315 aa12.81□□□□□ -0.36
MCF2L-228ENST00000487354 TMEM165Q9HC07 324 aa12.81□□□□□ -0.36
MCF2L-228ENST00000487354 INIPQ9NRY2 104 aa12.81□□□□□ -0.36
MCF2L-228ENST00000487354 TNFRSF19Q9NS68 423 aa12.81□□□□□ -0.36
MCF2L-228ENST00000487354 IL19Q9UHD0 177 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms