RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 KRTAP10-7P60409 375 aaPredicted RBP3.44□□□□□ -1.86
PRPF38A-203ENST00000487160 BST2Q10589 180 aaKnown RBP3.44□□□□□ -1.86
PRPF38A-203ENST00000487160 PDIA2Q13087 525 aaKnown RBP3.44□□□□□ -1.86
PRPF38A-203ENST00000487160 GNMTQ14749 295 aa3.44□□□□□ -1.86
PRPF38A-203ENST00000487160 ATP6AP1Q15904 470 aa3.44□□□□□ -1.86
PRPF38A-203ENST00000487160 ZNF630Q2M218 657 aaPredicted RBP3.44□□□□□ -1.86
PRPF38A-203ENST00000487160 HSDL1Q3SXM5 330 aa3.44□□□□□ -1.86
PRPF38A-203ENST00000487160 PAGE3Q5JUK9 113 aa3.44□□□□□ -1.86
PRPF38A-203ENST00000487160 KDM7AQ6ZMT4 941 aa3.44□□□□□ -1.86
PRPF38A-203ENST00000487160 ZNF620Q6ZNG0 422 aa3.44□□□□□ -1.86
PRPF38A-203ENST00000487160 C19orf35Q6ZS72 473 aa3.44□□□□□ -1.86
PRPF38A-203ENST00000487160 CDR2LQ86X02 465 aaPredicted RBP3.44□□□□□ -1.86
PRPF38A-203ENST00000487160 PSTKQ8IV42 348 aaKnown RBP3.44□□□□□ -1.86
PRPF38A-203ENST00000487160 PIANPQ8IYJ0 282 aa3.44□□□□□ -1.86
PRPF38A-203ENST00000487160 KIR2DL5AQ8N109 375 aa3.44□□□□□ -1.86
PRPF38A-203ENST00000487160 PNKDQ8N490 385 aa3.44□□□□□ -1.86
PRPF38A-203ENST00000487160 FNDC5Q8NAU1 212 aa3.44□□□□□ -1.86
PRPF38A-203ENST00000487160 OR6C4Q8NGE1 309 aa3.44□□□□□ -1.86
PRPF38A-203ENST00000487160 KIR2DL5BQ8NHK3 375 aa3.44□□□□□ -1.86
PRPF38A-203ENST00000487160 NEIL3Q8TAT5 605 aa3.44□□□□□ -1.86
PRPF38A-203ENST00000487160 SLC2A14Q8TDB8 520 aa3.44□□□□□ -1.86
PRPF38A-203ENST00000487160 PYROXD1Q8WU10 500 aa3.44□□□□□ -1.86
PRPF38A-203ENST00000487160 ARPC1AQ92747 370 aa3.44□□□□□ -1.86
PRPF38A-203ENST00000487160 UCN3Q969E3 161 aa3.44□□□□□ -1.86
PRPF38A-203ENST00000487160 TMEM101Q96IK0 257 aa3.44□□□□□ -1.86
PRPF38A-203ENST00000487160 ZIM3Q96PE6 472 aa3.44□□□□□ -1.86
PRPF38A-203ENST00000487160 MS4A4EQ96PG1 132 aa3.44□□□□□ -1.86
PRPF38A-203ENST00000487160 FAIM2Q9BWQ8 316 aa3.44□□□□□ -1.86
PRPF38A-203ENST00000487160 PDFQ9HBH1 243 aa3.44□□□□□ -1.86
PRPF38A-203ENST00000487160 GLRX2Q9NS18 164 aa3.44□□□□□ -1.86
PRPF38A-203ENST00000487160 SLC2A8Q9NY64 477 aa3.44□□□□□ -1.86
PRPF38A-203ENST00000487160 PISDQ9UG56 409 aa3.44□□□□□ -1.86
PRPF38A-203ENST00000487160 TMED5Q9Y3A6 229 aa3.44□□□□□ -1.86
PRPF38A-203ENST00000487160 CCDC171Q6TFL3 1326 aa3.44□□□□□ -1.86
PRPF38A-203ENST00000487160 AKAP13Q12802 2813 aa3.43□□□□□ -1.86
PRPF38A-203ENST00000487160 TICRRQ7Z2Z1 1910 aa3.43□□□□□ -1.86
PRPF38A-203ENST00000487160 IGLV3-22A0A075B6J6 115 aa3.43□□□□□ -1.86
PRPF38A-203ENST00000487160 GOLGA8OA6NCC3 632 aa3.43□□□□□ -1.86
PRPF38A-203ENST00000487160 HIDE1A8MVS5 230 aa3.43□□□□□ -1.86
PRPF38A-203ENST00000487160 GOLGA8NF8WBI6 632 aa3.43□□□□□ -1.86
PRPF38A-203ENST00000487160 DNALI1O14645 258 aaPredicted RBP3.43□□□□□ -1.86
PRPF38A-203ENST00000487160 UPK3AO75631 287 aa3.43□□□□□ -1.86
PRPF38A-203ENST00000487160 CIB2O75838 187 aa3.43□□□□□ -1.86
PRPF38A-203ENST00000487160 TMEM50AO95807 157 aa3.43□□□□□ -1.86
PRPF38A-203ENST00000487160 ABOP16442 354 aa3.43□□□□□ -1.86
PRPF38A-203ENST00000487160 HOXB8P17481 243 aaPredicted RBP3.43□□□□□ -1.86
PRPF38A-203ENST00000487160 FMO3P31513 532 aa3.43□□□□□ -1.86
PRPF38A-203ENST00000487160 BTCP35070 178 aa3.43□□□□□ -1.86
PRPF38A-203ENST00000487160 KRTAP10-5P60370 271 aa3.43□□□□□ -1.86
PRPF38A-203ENST00000487160 GPR157Q5UAW9 335 aa3.43□□□□□ -1.86
PRPF38A-203ENST00000487160 METAP1DQ6UB28 335 aaPredicted RBP3.43□□□□□ -1.86
PRPF38A-203ENST00000487160 ZNF546Q86UE3 836 aa3.43□□□□□ -1.86
PRPF38A-203ENST00000487160 PAQR7Q86WK9 346 aa3.43□□□□□ -1.86
PRPF38A-203ENST00000487160 PLA2G4DQ86XP0 818 aa3.43□□□□□ -1.86
PRPF38A-203ENST00000487160 MFSD6LQ8IWD5 586 aa3.43□□□□□ -1.86
PRPF38A-203ENST00000487160 C20orf203Q8NBC4 194 aa3.43□□□□□ -1.86
PRPF38A-203ENST00000487160 OR4F6Q8NGB9 312 aa3.43□□□□□ -1.86
PRPF38A-203ENST00000487160 RAB3IL1Q8TBN0 382 aa3.43□□□□□ -1.86
PRPF38A-203ENST00000487160 FANK1Q8TC84 345 aa3.43□□□□□ -1.86
PRPF38A-203ENST00000487160 TAAR1Q96RJ0 339 aa3.43□□□□□ -1.86
PRPF38A-203ENST00000487160 GBA3Q9H227 469 aa3.43□□□□□ -1.86
PRPF38A-203ENST00000487160 BOLA2Q9H3K6 86 aa3.43□□□□□ -1.86
PRPF38A-203ENST00000487160 LY9Q9HBG7 655 aa3.43□□□□□ -1.86
PRPF38A-203ENST00000487160 PLGRKTQ9HBL7 147 aa3.43□□□□□ -1.86
PRPF38A-203ENST00000487160 SPATA7Q9P0W8 599 aa3.43□□□□□ -1.86
PRPF38A-203ENST00000487160 MTRF1LQ9UGC7 380 aaKnown RBP3.43□□□□□ -1.86
PRPF38A-203ENST00000487160 IKZF2Q9UKS7 526 aa3.43□□□□□ -1.86
PRPF38A-203ENST00000487160 NEUROG3Q9Y4Z2 214 aa3.43□□□□□ -1.86
PRPF38A-203ENST00000487160 LAMA1P25391 3075 aa3.43□□□□□ -1.86
PRPF38A-203ENST00000487160 FASNP49327 2511 aaKnown RBP3.43□□□□□ -1.86
PRPF38A-203ENST00000487160 DSPP15924 2871 aaKnown RBP3.43□□□□□ -1.86
PRPF38A-203ENST00000487160 MYH9P35579 1960 aaKnown RBP3.43□□□□□ -1.86
PRPF38A-203ENST00000487160 LOC400499M0QZD8 3231 aa3.43□□□□□ -1.86
PRPF38A-203ENST00000487160 WDR19Q8NEZ3 1342 aa3.43□□□□□ -1.86
PRPF38A-203ENST00000487160 DOCK6Q96HP0 2047 aa3.43□□□□□ -1.86
PRPF38A-203ENST00000487160 EML5Q05BV3 1969 aa3.42□□□□□ -1.86
PRPF38A-203ENST00000487160 C1orf105O95561 183 aa3.42□□□□□ -1.86
PRPF38A-203ENST00000487160 CST1P01037 141 aa3.42□□□□□ -1.86
PRPF38A-203ENST00000487160 IGLV1-47P01700 117 aa3.42□□□□□ -1.86
PRPF38A-203ENST00000487160 DCNP07585 359 aaKnown RBP3.42□□□□□ -1.86
PRPF38A-203ENST00000487160 MCF2P10911 925 aa3.42□□□□□ -1.86
PRPF38A-203ENST00000487160 ELK1P19419 428 aa3.42□□□□□ -1.86
PRPF38A-203ENST00000487160 KITLGP21583 273 aa3.42□□□□□ -1.86
PRPF38A-203ENST00000487160 CCNCP24863 283 aa3.42□□□□□ -1.86
PRPF38A-203ENST00000487160 HTR1EP28566 365 aa3.42□□□□□ -1.86
PRPF38A-203ENST00000487160 CD52P31358 61 aa3.42□□□□□ -1.86
PRPF38A-203ENST00000487160 HNRNPH3P31942 346 aaKnown RBP3.42□□□□□ -1.86
PRPF38A-203ENST00000487160 FDFT1P37268 417 aa3.42□□□□□ -1.86
PRPF38A-203ENST00000487160 CRYBB2P43320 205 aa3.42□□□□□ -1.86
PRPF38A-203ENST00000487160 SUCLG1P53597 346 aaKnown RBP3.42□□□□□ -1.86
PRPF38A-203ENST00000487160 PLP1P60201 277 aa3.42□□□□□ -1.86
PRPF38A-203ENST00000487160 ENPEPQ07075 957 aa3.42□□□□□ -1.86
PRPF38A-203ENST00000487160 MGAT3Q09327 533 aa3.42□□□□□ -1.86
PRPF38A-203ENST00000487160 NRF1Q16656 503 aa3.42□□□□□ -1.86
PRPF38A-203ENST00000487160 KRT71Q3SY84 523 aa3.42□□□□□ -1.86
PRPF38A-203ENST00000487160 CASC10Q5T4H9 136 aa3.42□□□□□ -1.86
PRPF38A-203ENST00000487160 LRRC74BQ6ZQY2 392 aa3.42□□□□□ -1.86
PRPF38A-203ENST00000487160 RNF165Q6ZSG1 346 aa3.42□□□□□ -1.86
PRPF38A-203ENST00000487160 RALGPS2Q86X27 583 aaPredicted RBP3.42□□□□□ -1.86
PRPF38A-203ENST00000487160 DCAF4L2Q8NA75 395 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms