RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 TRAPPC2P0DI81 140 aa18.16■□□□□ 0.5
HPS3-206ENST00000486530 TRAPPC2BP0DI82 140 aa18.16■□□□□ 0.5
HPS3-206ENST00000486530 ZNF17P17021 662 aa18.16■□□□□ 0.5
HPS3-206ENST00000486530 ZNF43P17038 809 aa18.16■□□□□ 0.5
HPS3-206ENST00000486530 TIGD3Q6B0B8 471 aa18.16■□□□□ 0.5
HPS3-206ENST00000486530 MDGA2Q7Z553 956 aa18.16■□□□□ 0.5
HPS3-206ENST00000486530 LINC00346Q8IVM7 164 aa18.16■□□□□ 0.5
HPS3-206ENST00000486530 CMTM4Q8IZR5 234 aa18.16■□□□□ 0.5
HPS3-206ENST00000486530 GNRHR2Q96P88 292 aa18.16■□□□□ 0.5
HPS3-206ENST00000486530 ZNF814B7Z6K7 855 aa18.15■□□□□ 0.5
HPS3-206ENST00000486530 CCNKO75909 580 aa18.15■□□□□ 0.5
HPS3-206ENST00000486530 SCAND1P57086 179 aa18.15■□□□□ 0.5
HPS3-206ENST00000486530 RPS15P62841 145 aaKnown RBP18.15■□□□□ 0.5
HPS3-206ENST00000486530 RSBN1Q5VWQ0 802 aaPredicted RBP18.15■□□□□ 0.5
HPS3-206ENST00000486530 RAET1LQ5VY80 246 aa18.15■□□□□ 0.5
HPS3-206ENST00000486530 C11orf40Q8WZ69 217 aa18.15■□□□□ 0.5
HPS3-206ENST00000486530 SLC25A38Q96DW6 304 aa18.15■□□□□ 0.5
HPS3-206ENST00000486530 FAM86C1Q9NVL1 165 aa18.15■□□□□ 0.5
HPS3-206ENST00000486530 SDK2Q58EX2 2172 aa18.15■□□□□ 0.5
HPS3-206ENST00000486530 KIAA1549Q9HCM3 1950 aa18.14■□□□□ 0.49
HPS3-206ENST00000486530 C9orf172C9J069 976 aa18.14■□□□□ 0.49
HPS3-206ENST00000486530 MASP2O00187 686 aa18.14■□□□□ 0.49
HPS3-206ENST00000486530 GSTZ1O43708 216 aaPredicted RBP18.14■□□□□ 0.49
HPS3-206ENST00000486530 CBR3O75828 277 aa18.14■□□□□ 0.49
HPS3-206ENST00000486530 MAS1P04201 325 aa18.14■□□□□ 0.49
HPS3-206ENST00000486530 CFPP27918 469 aa18.14■□□□□ 0.49
HPS3-206ENST00000486530 LAP3P28838 519 aa18.14■□□□□ 0.49
HPS3-206ENST00000486530 CLDN20P56880 219 aa18.14■□□□□ 0.49
HPS3-206ENST00000486530 Q0VFX4 171 aa18.14■□□□□ 0.49
HPS3-206ENST00000486530 CAMK2DQ13557 499 aa18.14■□□□□ 0.49
HPS3-206ENST00000486530 ESPNLQ6ZVH7 1005 aa18.14■□□□□ 0.49
HPS3-206ENST00000486530 ASB18Q6ZVZ8 466 aa18.14■□□□□ 0.49
HPS3-206ENST00000486530 FCRLAQ7L513 359 aa18.14■□□□□ 0.49
HPS3-206ENST00000486530 PIP4P1Q86T03 277 aa18.14■□□□□ 0.49
HPS3-206ENST00000486530 TMPRSS12Q86WS5 348 aa18.14■□□□□ 0.49
HPS3-206ENST00000486530 ZNF227Q86WZ6 799 aa18.14■□□□□ 0.49
HPS3-206ENST00000486530 RNF133Q8WVZ7 376 aa18.14■□□□□ 0.49
HPS3-206ENST00000486530 RAB40AQ8WXH6 277 aa18.14■□□□□ 0.49
HPS3-206ENST00000486530 YIPF5Q969M3 257 aa18.14■□□□□ 0.49
HPS3-206ENST00000486530 JSRP1Q96MG2 331 aaPredicted RBP18.14■□□□□ 0.49
HPS3-206ENST00000486530 ABCG5Q9H222 651 aa18.14■□□□□ 0.49
HPS3-206ENST00000486530 NLKQ9UBE8 527 aa18.14■□□□□ 0.49
HPS3-206ENST00000486530 OR5V1Q9UGF6 321 aa18.14■□□□□ 0.49
HPS3-206ENST00000486530 DHDHQ9UQ10 334 aa18.14■□□□□ 0.49
HPS3-206ENST00000486530 G3V3Y1 287 aa18.14■□□□□ 0.49
HPS3-206ENST00000486530 GPR176Q14439 515 aa18.14■□□□□ 0.49
HPS3-206ENST00000486530 ZNF468Q5VIY5 522 aaPredicted RBP18.14■□□□□ 0.49
HPS3-206ENST00000486530 H3F3CQ6NXT2 135 aa18.14■□□□□ 0.49
HPS3-206ENST00000486530 DHRS13Q6UX07 377 aa18.14■□□□□ 0.49
HPS3-206ENST00000486530 ZFP3Q96NJ6 502 aa18.14■□□□□ 0.49
HPS3-206ENST00000486530 MRPS7Q9Y2R9 242 aaKnown RBP18.14■□□□□ 0.49
HPS3-206ENST00000486530 EMC9Q9Y3B6 208 aa18.14■□□□□ 0.49
HPS3-206ENST00000486530 CACNG2Q9Y698 323 aa18.14■□□□□ 0.49
HPS3-206ENST00000486530 OR2M5A3KFT3 312 aa18.13■□□□□ 0.49
HPS3-206ENST00000486530 TTLL8A6PVC2 850 aa18.13■□□□□ 0.49
HPS3-206ENST00000486530 ZIC3O60481 467 aa18.13■□□□□ 0.49
HPS3-206ENST00000486530 P04436 131 aa18.13■□□□□ 0.49
HPS3-206ENST00000486530 SERPINA7P05543 415 aa18.13■□□□□ 0.49
HPS3-206ENST00000486530 CD2P06729 351 aa18.13■□□□□ 0.49
HPS3-206ENST00000486530 H2BFMP0C1H6 154 aa18.13■□□□□ 0.49
HPS3-206ENST00000486530 CLDN12P56749 244 aa18.13■□□□□ 0.49
HPS3-206ENST00000486530 CYB5R1Q9UHQ9 305 aa18.13■□□□□ 0.49
HPS3-206ENST00000486530 FBXL3Q9UKT7 428 aa18.13■□□□□ 0.49
HPS3-206ENST00000486530 CCDC187A0A096LP49 1063 aa18.12■□□□□ 0.49
HPS3-206ENST00000486530 A0A1W2PPL8 197 aa18.12■□□□□ 0.49
HPS3-206ENST00000486530 HMX3A6NHT5 357 aa18.12■□□□□ 0.49
HPS3-206ENST00000486530 H3BSH0 61 aa18.12■□□□□ 0.49
HPS3-206ENST00000486530 EIF1BO60739 113 aaKnown RBP18.12■□□□□ 0.49
HPS3-206ENST00000486530 SLC6A1P30531 599 aa18.12■□□□□ 0.49
HPS3-206ENST00000486530 DGCR2P98153 550 aa18.12■□□□□ 0.49
HPS3-206ENST00000486530 EIF3IQ13347 325 aaKnown RBP18.12■□□□□ 0.49
HPS3-206ENST00000486530 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.12■□□□□ 0.49
HPS3-206ENST00000486530 TOMM5Q8N4H5 51 aa18.12■□□□□ 0.49
HPS3-206ENST00000486530 ESX1Q8N693 406 aa18.12■□□□□ 0.49
HPS3-206ENST00000486530 ZBTB8BQ8NAP8 495 aaPredicted RBP18.12■□□□□ 0.49
HPS3-206ENST00000486530 DNAAF1Q8NEP3 725 aa18.12■□□□□ 0.49
HPS3-206ENST00000486530 SMIM4Q8WVI0 70 aa18.12■□□□□ 0.49
HPS3-206ENST00000486530 PIGQQ9BRB3 760 aa18.12■□□□□ 0.49
HPS3-206ENST00000486530 MARVELD1Q9BSK0 173 aa18.12■□□□□ 0.49
HPS3-206ENST00000486530 G6PC2Q9NQR9 355 aa18.12■□□□□ 0.49
HPS3-206ENST00000486530 P4HTMQ9NXG6 502 aa18.12■□□□□ 0.49
HPS3-206ENST00000486530 STEAP1Q9UHE8 339 aa18.12■□□□□ 0.49
HPS3-206ENST00000486530 OR52A1Q9UKL2 312 aa18.12■□□□□ 0.49
HPS3-206ENST00000486530 A0A0B4J293 547 aa18.12■□□□□ 0.49
HPS3-206ENST00000486530 ZNF726A6NNF4 738 aa18.12■□□□□ 0.49
HPS3-206ENST00000486530 RAMP1O60894 148 aa18.12■□□□□ 0.49
HPS3-206ENST00000486530 ISG15P05161 165 aa18.12■□□□□ 0.49
HPS3-206ENST00000486530 ADRB1P08588 477 aa18.12■□□□□ 0.49
HPS3-206ENST00000486530 NR2C1P13056 603 aa18.12■□□□□ 0.49
HPS3-206ENST00000486530 ACHEP22303 614 aa18.12■□□□□ 0.49
HPS3-206ENST00000486530 H3F3AP84243 136 aa18.12■□□□□ 0.49
HPS3-206ENST00000486530 TRIP6Q15654 476 aaKnown RBP18.12■□□□□ 0.49
HPS3-206ENST00000486530 HIST3H3Q16695 136 aa18.12■□□□□ 0.49
HPS3-206ENST00000486530 SLC36A2Q495M3 483 aa18.12■□□□□ 0.49
HPS3-206ENST00000486530 TMEM164Q5U3C3 297 aa18.12■□□□□ 0.49
HPS3-206ENST00000486530 SLC25A47Q6Q0C1 308 aa18.12■□□□□ 0.49
HPS3-206ENST00000486530 CORO6Q6QEF8 472 aa18.12■□□□□ 0.49
HPS3-206ENST00000486530 ZNF704Q6ZNC4 412 aaPredicted RBP18.12■□□□□ 0.49
HPS3-206ENST00000486530 KRT74Q7RTS7 529 aa18.12■□□□□ 0.49
HPS3-206ENST00000486530 GLCCI1Q86VQ1 547 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms