RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 LRRC40Q9H9A6 602 aa2.37□□□□□ -2.03
LTN1-206ENST00000486427 TSSC4Q9Y5U2 329 aaPredicted RBP2.37□□□□□ -2.03
LTN1-206ENST00000486427 OR52A4PA6NMU1 304 aa2.36□□□□□ -2.03
LTN1-206ENST00000486427 FOXE1O00358 373 aaPredicted RBP2.36□□□□□ -2.03
LTN1-206ENST00000486427 PSTPIP1O43586 416 aa2.36□□□□□ -2.03
LTN1-206ENST00000486427 TMEM50AO95807 157 aa2.36□□□□□ -2.03
LTN1-206ENST00000486427 COL8A2P25067 703 aa2.36□□□□□ -2.03
LTN1-206ENST00000486427 PIGHQ14442 188 aaPredicted RBP2.36□□□□□ -2.03
LTN1-206ENST00000486427 UNQ9165/PRO28630Q6UXU0 137 aa2.36□□□□□ -2.03
LTN1-206ENST00000486427 LRP11Q86VZ4 500 aa2.36□□□□□ -2.03
LTN1-206ENST00000486427 OR8J1Q8NGP2 316 aa2.36□□□□□ -2.03
LTN1-206ENST00000486427 STMN2Q93045 179 aa2.36□□□□□ -2.03
LTN1-206ENST00000486427 SGK2Q9HBY8 427 aa2.36□□□□□ -2.03
LTN1-206ENST00000486427 DPM1O60762 260 aa2.35□□□□□ -2.03
LTN1-206ENST00000486427 DTYMKP23919 212 aa2.35□□□□□ -2.03
LTN1-206ENST00000486427 PRRX1P54821 245 aa2.35□□□□□ -2.03
LTN1-206ENST00000486427 ACTG2P63267 376 aa2.35□□□□□ -2.03
LTN1-206ENST00000486427 C6orf226Q5I0X4 101 aa2.35□□□□□ -2.03
LTN1-206ENST00000486427 CCNJQ5T5M9 372 aa2.35□□□□□ -2.03
LTN1-206ENST00000486427 METTL21CQ5VZV1 264 aa2.35□□□□□ -2.03
LTN1-206ENST00000486427 C17orf50Q8WW18 174 aa2.35□□□□□ -2.03
LTN1-206ENST00000486427 ZBTB18Q99592 522 aa2.35□□□□□ -2.03
LTN1-206ENST00000486427 TEKT3Q9BXF9 490 aa2.35□□□□□ -2.03
LTN1-206ENST00000486427 NT5MQ9NPB1 228 aa2.35□□□□□ -2.03
LTN1-206ENST00000486427 KCNJ16Q9NPI9 418 aa2.35□□□□□ -2.03
LTN1-206ENST00000486427 FBXO6Q9NRD1 293 aaPredicted RBP2.35□□□□□ -2.03
LTN1-206ENST00000486427 SLC7A8Q9UHI5 535 aa2.35□□□□□ -2.03
LTN1-206ENST00000486427 ST3GAL6Q9Y274 331 aa2.35□□□□□ -2.03
LTN1-206ENST00000486427 TMED5Q9Y3A6 229 aa2.35□□□□□ -2.03
LTN1-206ENST00000486427 NPTNQ9Y639 398 aa2.35□□□□□ -2.03
LTN1-206ENST00000486427 CNTNAP1P78357 1384 aa2.35□□□□□ -2.03
LTN1-206ENST00000486427 KANK1Q14678 1352 aa2.35□□□□□ -2.03
LTN1-206ENST00000486427 DHX57Q6P158 1386 aaKnown RBP2.35□□□□□ -2.03
LTN1-206ENST00000486427 FAM240BA0A1B0GVZ2 78 aa2.34□□□□□ -2.03
LTN1-206ENST00000486427 PPP1R2P9O14990 202 aa2.34□□□□□ -2.03
LTN1-206ENST00000486427 SOCS1O15524 211 aa2.34□□□□□ -2.03
LTN1-206ENST00000486427 CD74P04233 296 aa2.34□□□□□ -2.03
LTN1-206ENST00000486427 KITLGP21583 273 aa2.34□□□□□ -2.03
LTN1-206ENST00000486427 SSTR5P35346 364 aa2.34□□□□□ -2.03
LTN1-206ENST00000486427 SSR1P43307 286 aaKnown RBP2.34□□□□□ -2.03
LTN1-206ENST00000486427 MXD1Q05195 221 aa2.34□□□□□ -2.03
LTN1-206ENST00000486427 ECH1Q13011 328 aa2.34□□□□□ -2.03
LTN1-206ENST00000486427 LRRC52Q8N7C0 313 aa2.34□□□□□ -2.03
LTN1-206ENST00000486427 PIFOQ8TCI5 191 aa2.34□□□□□ -2.03
LTN1-206ENST00000486427 NT5C3BQ969T7 300 aa2.34□□□□□ -2.03
LTN1-206ENST00000486427 MRGPRFQ96AM1 343 aa2.34□□□□□ -2.03
LTN1-206ENST00000486427 ZNF488Q96MN9 340 aa2.34□□□□□ -2.03
LTN1-206ENST00000486427 OR52D1Q9H346 318 aa2.34□□□□□ -2.03
LTN1-206ENST00000486427 HYPKQ9NX55 129 aa2.34□□□□□ -2.03
LTN1-206ENST00000486427 ZNF816-ZNF321PA0A0X1KG74 233 aa2.33□□□□□ -2.04
LTN1-206ENST00000486427 VGLL3A8MV65 326 aa2.33□□□□□ -2.04
LTN1-206ENST00000486427 IGHDP01880 384 aa2.33□□□□□ -2.04
LTN1-206ENST00000486427 CCNB1P14635 433 aa2.33□□□□□ -2.04
LTN1-206ENST00000486427 RAB3BP20337 219 aa2.33□□□□□ -2.04
LTN1-206ENST00000486427 MX1P20591 662 aa2.33□□□□□ -2.04
LTN1-206ENST00000486427 RPL23AP62750 156 aaKnown RBP2.33□□□□□ -2.04
LTN1-206ENST00000486427 IMMTQ16891 758 aaKnown RBP2.33□□□□□ -2.04
LTN1-206ENST00000486427 ORMDL2Q53FV1 153 aa2.33□□□□□ -2.04
LTN1-206ENST00000486427 CTSL3PQ5NE16 218 aa2.33□□□□□ -2.04
LTN1-206ENST00000486427 THEM4Q5T1C6 240 aa2.33□□□□□ -2.04
LTN1-206ENST00000486427 WDFY1Q8IWB7 410 aa2.33□□□□□ -2.04
LTN1-206ENST00000486427 OR1S2Q8NGQ3 325 aa2.33□□□□□ -2.04
LTN1-206ENST00000486427 LILRB4Q8NHJ6 448 aa2.33□□□□□ -2.04
LTN1-206ENST00000486427 RHEBL1Q8TAI7 183 aa2.33□□□□□ -2.04
LTN1-206ENST00000486427 ZNF606Q8WXB4 792 aa2.33□□□□□ -2.04
LTN1-206ENST00000486427 TIMM17AQ99595 171 aa2.33□□□□□ -2.04
LTN1-206ENST00000486427 ROPN1BQ9BZX4 212 aaPredicted RBP2.33□□□□□ -2.04
LTN1-206ENST00000486427 FAM49BQ9NUQ9 324 aa2.33□□□□□ -2.04
LTN1-206ENST00000486427 ING4Q9UNL4 249 aa2.33□□□□□ -2.04
LTN1-206ENST00000486427 CARHSP1Q9Y2V2 147 aaKnown RBP2.33□□□□□ -2.04
LTN1-206ENST00000486427 CAMTA1Q9Y6Y1 1673 aa2.33□□□□□ -2.04
LTN1-206ENST00000486427 DOCK8Q8NF50 2099 aa2.33□□□□□ -2.04
LTN1-206ENST00000486427 NID2Q14112 1375 aa2.33□□□□□ -2.04
LTN1-206ENST00000486427 AHDC1Q5TGY3 1603 aaPredicted RBP2.32□□□□□ -2.04
LTN1-206ENST00000486427 ZNF716A6NP11 495 aa2.32□□□□□ -2.04
LTN1-206ENST00000486427 CHST1O43916 411 aa2.32□□□□□ -2.04
LTN1-206ENST00000486427 ZNF735P0CB33 412 aa2.32□□□□□ -2.04
LTN1-206ENST00000486427 PTMSP20962 102 aa2.32□□□□□ -2.04
LTN1-206ENST00000486427 KCNJ2P63252 427 aa2.32□□□□□ -2.04
LTN1-206ENST00000486427 TWF1Q12792 350 aa2.32□□□□□ -2.04
LTN1-206ENST00000486427 IFT88Q13099 833 aa2.32□□□□□ -2.04
LTN1-206ENST00000486427 KRTAP6-3Q3LI67 103 aa2.32□□□□□ -2.04
LTN1-206ENST00000486427 CEP55Q53EZ4 464 aa2.32□□□□□ -2.04
LTN1-206ENST00000486427 KDELC1Q6UW63 502 aa2.32□□□□□ -2.04
LTN1-206ENST00000486427 SLC16A13Q7RTY0 426 aa2.32□□□□□ -2.04
LTN1-206ENST00000486427 TGIF2LXQ8IUE1 241 aa2.32□□□□□ -2.04
LTN1-206ENST00000486427 EGFL6Q8IUX8 553 aa2.32□□□□□ -2.04
LTN1-206ENST00000486427 CDKL3Q8IVW4 592 aaPredicted RBP2.32□□□□□ -2.04
LTN1-206ENST00000486427 PDIK1LQ8N165 341 aa2.32□□□□□ -2.04
LTN1-206ENST00000486427 MS4A15Q8N5U1 240 aa2.32□□□□□ -2.04
LTN1-206ENST00000486427 EID2Q8N6I1 236 aa2.32□□□□□ -2.04
LTN1-206ENST00000486427 OR6N1Q8NGY5 312 aa2.32□□□□□ -2.04
LTN1-206ENST00000486427 CXorf40AQ8TE69 158 aa2.32□□□□□ -2.04
LTN1-206ENST00000486427 SEH1LQ96EE3 360 aa2.32□□□□□ -2.04
LTN1-206ENST00000486427 SERPINB12Q96P63 405 aa2.32□□□□□ -2.04
LTN1-206ENST00000486427 PLA2G12AQ9BZM1 189 aa2.32□□□□□ -2.04
LTN1-206ENST00000486427 ASB3Q9Y575 518 aa2.32□□□□□ -2.04
LTN1-206ENST00000486427 IGHV1OR15-9A0A0B4J2B8 117 aa2.31□□□□□ -2.04
LTN1-206ENST00000486427 C5orf63A6NC05 138 aa2.31□□□□□ -2.04
LTN1-206ENST00000486427 H0YJW9 148 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms