RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 SNX33Q8WV41 574 aa15.14■□□□□ 0.01
COL6A1-204ENST00000486023 ERMAPQ96PL5 475 aaPredicted RBP15.14■□□□□ 0.01
COL6A1-204ENST00000486023 WNT5BQ9H1J7 359 aa15.14■□□□□ 0.01
COL6A1-204ENST00000486023 SYT4Q9H2B2 425 aa15.14■□□□□ 0.01
COL6A1-204ENST00000486023 NARFLQ9H6Q4 476 aa15.14■□□□□ 0.01
COL6A1-204ENST00000486023 POLE4Q9NR33 117 aa15.14■□□□□ 0.01
COL6A1-204ENST00000486023 COA3Q9Y2R0 106 aaPredicted RBP15.14■□□□□ 0.01
COL6A1-204ENST00000486023 ABCA1O95477 2261 aa15.13■□□□□ 0.01
COL6A1-204ENST00000486023 LOC100289279A0A1B0GTE1 492 aa15.13■□□□□ 0.01
COL6A1-204ENST00000486023 TPD52L2O43399 206 aaKnown RBP15.13■□□□□ 0.01
COL6A1-204ENST00000486023 MPZL1O95297 269 aa15.13■□□□□ 0.01
COL6A1-204ENST00000486023 SNAP29O95721 258 aa15.13■□□□□ 0.01
COL6A1-204ENST00000486023 SEMG1P04279 462 aa15.13■□□□□ 0.01
COL6A1-204ENST00000486023 CTLA4P16410 223 aa15.13■□□□□ 0.01
COL6A1-204ENST00000486023 CR1P17927 2039 aa15.13■□□□□ 0.01
COL6A1-204ENST00000486023 GCH1P30793 250 aa15.13■□□□□ 0.01
COL6A1-204ENST00000486023 SDHAP31040 664 aa15.13■□□□□ 0.01
COL6A1-204ENST00000486023 MAGEB1P43366 347 aa15.13■□□□□ 0.01
COL6A1-204ENST00000486023 GZMKP49863 264 aa15.13■□□□□ 0.01
COL6A1-204ENST00000486023 RPS6KA3P51812 740 aa15.13■□□□□ 0.01
COL6A1-204ENST00000486023 ENDOGQ14249 297 aaKnown RBP15.13■□□□□ 0.01
COL6A1-204ENST00000486023 TMEM154Q6P9G4 183 aa15.13■□□□□ 0.01
COL6A1-204ENST00000486023 SMARCD3Q6STE5 483 aa15.13■□□□□ 0.01
COL6A1-204ENST00000486023 FAM122BQ7Z309 247 aa15.13■□□□□ 0.01
COL6A1-204ENST00000486023 POM121L2Q96KW2 1035 aa15.13■□□□□ 0.01
COL6A1-204ENST00000486023 SNX18Q96RF0 628 aa15.13■□□□□ 0.01
COL6A1-204ENST00000486023 NRIP3Q9NQ35 241 aa15.13■□□□□ 0.01
COL6A1-204ENST00000486023 GPR160Q9UJ42 338 aa15.13■□□□□ 0.01
COL6A1-204ENST00000486023 CDC14BO60729 498 aa15.12■□□□□ 0.01
COL6A1-204ENST00000486023 KHDRBS3O75525 346 aaKnown RBP15.12■□□□□ 0.01
COL6A1-204ENST00000486023 GPANK1O95872 356 aa15.12■□□□□ 0.01
COL6A1-204ENST00000486023 FAM107AO95990 144 aa15.12■□□□□ 0.01
COL6A1-204ENST00000486023 ATP6V1B2P21281 511 aa15.12■□□□□ 0.01
COL6A1-204ENST00000486023 WNT5AP41221 380 aa15.12■□□□□ 0.01
COL6A1-204ENST00000486023 CCL8P80075 99 aa15.12■□□□□ 0.01
COL6A1-204ENST00000486023 DBPQ10586 325 aaPredicted RBP15.12■□□□□ 0.01
COL6A1-204ENST00000486023 TRIP10Q15642 601 aa15.12■□□□□ 0.01
COL6A1-204ENST00000486023 TSTQ16762 297 aaKnown RBP15.12■□□□□ 0.01
COL6A1-204ENST00000486023 CHRFAM7AQ494W8 412 aa15.12■□□□□ 0.01
COL6A1-204ENST00000486023 ELFN2Q5R3F8 820 aa15.12■□□□□ 0.01
COL6A1-204ENST00000486023 GPR139Q6DWJ6 353 aa15.12■□□□□ 0.01
COL6A1-204ENST00000486023 DPY19L2P2Q6ZN68 376 aa15.12■□□□□ 0.01
COL6A1-204ENST00000486023 PTCHD4Q6ZW05 846 aa15.12■□□□□ 0.01
COL6A1-204ENST00000486023 ZNF101Q8IZC7 436 aa15.12■□□□□ 0.01
COL6A1-204ENST00000486023 SLC25A40Q8TBP6 338 aa15.12■□□□□ 0.01
COL6A1-204ENST00000486023 FANK1Q8TC84 345 aa15.12■□□□□ 0.01
COL6A1-204ENST00000486023 GTF3AQ92664 365 aaKnown RBP15.12■□□□□ 0.01
COL6A1-204ENST00000486023 DHRS1Q96LJ7 313 aa15.12■□□□□ 0.01
COL6A1-204ENST00000486023 SAMD8Q96LT4 415 aa15.12■□□□□ 0.01
COL6A1-204ENST00000486023 IFT27Q9BW83 186 aa15.12■□□□□ 0.01
COL6A1-204ENST00000486023 NUAK2Q9H093 628 aa15.12■□□□□ 0.01
COL6A1-204ENST00000486023 SRA1Q9HD15 236 aaKnown RBP15.12■□□□□ 0.01
COL6A1-204ENST00000486023 IL1RAPQ9NPH3 570 aa15.12■□□□□ 0.01
COL6A1-204ENST00000486023 HINT3Q9NQE9 182 aaKnown RBP15.12■□□□□ 0.01
COL6A1-204ENST00000486023 SLCO1C1Q9NYB5 712 aa15.12■□□□□ 0.01
COL6A1-204ENST00000486023 TGFAP01135 160 aa15.11■□□□□ 0.01
COL6A1-204ENST00000486023 ZNF250P15622 560 aa15.11■□□□□ 0.01
COL6A1-204ENST00000486023 ZNF23P17027 643 aa15.11■□□□□ 0.01
COL6A1-204ENST00000486023 NOS3P29474 1203 aa15.11■□□□□ 0.01
COL6A1-204ENST00000486023 IFNGR2P38484 337 aa15.11■□□□□ 0.01
COL6A1-204ENST00000486023 CDKN2AP42771 156 aaKnown RBP15.11■□□□□ 0.01
COL6A1-204ENST00000486023 FXYD6P3P58550 94 aa15.11■□□□□ 0.01
COL6A1-204ENST00000486023 PPP1R8Q12972 351 aaKnown RBP15.11■□□□□ 0.01
COL6A1-204ENST00000486023 CCNIQ14094 377 aa15.11■□□□□ 0.01
COL6A1-204ENST00000486023 RFX4Q33E94 735 aa15.11■□□□□ 0.01
COL6A1-204ENST00000486023 ZNF718Q3SXZ3 478 aa15.11■□□□□ 0.01
COL6A1-204ENST00000486023 C1orf94Q6P1W5 598 aa15.11■□□□□ 0.01
COL6A1-204ENST00000486023 LEG1Q6P5S2 330 aa15.11■□□□□ 0.01
COL6A1-204ENST00000486023 FOXL2NBQ6ZUU3 175 aa15.11■□□□□ 0.01
COL6A1-204ENST00000486023 JAZF1Q86VZ6 243 aa15.11■□□□□ 0.01
COL6A1-204ENST00000486023 GNPDA2Q8TDQ7 276 aa15.11■□□□□ 0.01
COL6A1-204ENST00000486023 RDH5Q92781 318 aa15.11■□□□□ 0.01
COL6A1-204ENST00000486023 MSI2Q96DH6 328 aaKnown RBP15.11■□□□□ 0.01
COL6A1-204ENST00000486023 TSSK2Q96PF2 358 aa15.11■□□□□ 0.01
COL6A1-204ENST00000486023 FUZQ9BT04 418 aa15.11■□□□□ 0.01
COL6A1-204ENST00000486023 BEX2Q9BXY8 128 aa15.11■□□□□ 0.01
COL6A1-204ENST00000486023 OR2J1Q9GZK6 312 aa15.11■□□□□ 0.01
COL6A1-204ENST00000486023 OR52D1Q9H346 318 aa15.11■□□□□ 0.01
COL6A1-204ENST00000486023 POLR1DQ9Y2S0 133 aa15.11■□□□□ 0.01
COL6A1-204ENST00000486023 GRIP1Q9Y3R0 1128 aa15.11■□□□□ 0.01
COL6A1-204ENST00000486023 C17orf100A8MU93 164 aa15.1■□□□□ 0.01
COL6A1-204ENST00000486023 TNFRSF11BO00300 401 aa15.1■□□□□ 0.01
COL6A1-204ENST00000486023 PPIHO43447 177 aaKnown RBP15.1■□□□□ 0.01
COL6A1-204ENST00000486023 SPRY3O43610 288 aa15.1■□□□□ 0.01
COL6A1-204ENST00000486023 AHCYL1O43865 530 aa15.1■□□□□ 0.01
COL6A1-204ENST00000486023 DOK2O60496 412 aa15.1■□□□□ 0.01
COL6A1-204ENST00000486023 LMX1BO60663 402 aa15.1■□□□□ 0.01
COL6A1-204ENST00000486023 NCR1O76036 304 aa15.1■□□□□ 0.01
COL6A1-204ENST00000486023 NGFP01138 241 aa15.1■□□□□ 0.01
COL6A1-204ENST00000486023 SLC6A6P31641 620 aa15.1■□□□□ 0.01
COL6A1-204ENST00000486023 IL2RGP31785 369 aa15.1■□□□□ 0.01
COL6A1-204ENST00000486023 MPV17P39210 176 aa15.1■□□□□ 0.01
COL6A1-204ENST00000486023 HTR5AP47898 357 aa15.1■□□□□ 0.01
COL6A1-204ENST00000486023 CHN2P52757 468 aa15.1■□□□□ 0.01
COL6A1-204ENST00000486023 SCRN3Q0VDG4 424 aa15.1■□□□□ 0.01
COL6A1-204ENST00000486023 MOGQ16653 247 aa15.1■□□□□ 0.01
COL6A1-204ENST00000486023 UNQ6126/PRO20091Q6UXV3 157 aa15.1■□□□□ 0.01
COL6A1-204ENST00000486023 IL17RELQ6ZVW7 336 aa15.1■□□□□ 0.01
COL6A1-204ENST00000486023 DHFR2Q86XF0 187 aa15.1■□□□□ 0.01
COL6A1-204ENST00000486023 HIPK1Q86Z02 1210 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms