RNA–Protein interactions for RNA: ENST00000485607.1

CLRN1-206, Transcript of clarin 1, humanhuman

TSL 1 (best)

Gene CLRN1, Length 704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-206ENST00000485607 GAAP10253 952 aa6.3□□□□□ -1.4
CLRN1-206ENST00000485607 ZNF250P15622 560 aa6.3□□□□□ -1.4
CLRN1-206ENST00000485607 CDAP32320 146 aa6.3□□□□□ -1.4
CLRN1-206ENST00000485607 LSP1P33241 339 aa6.3□□□□□ -1.4
CLRN1-206ENST00000485607 RBMXP38159 391 aaKnown RBP6.3□□□□□ -1.4
CLRN1-206ENST00000485607 OR1E2P47887 323 aa6.3□□□□□ -1.4
CLRN1-206ENST00000485607 KLF3P57682 345 aaPredicted RBP6.3□□□□□ -1.4
CLRN1-206ENST00000485607 CLRN1P58418 232 aa6.3□□□□□ -1.4
CLRN1-206ENST00000485607 CCL8P80075 99 aa6.3□□□□□ -1.4
CLRN1-206ENST00000485607 SF3A3Q12874 501 aaKnown RBP eCLIP6.3□□□□□ -1.4
CLRN1-206ENST00000485607 PIN1Q13526 163 aaPredicted RBP6.3□□□□□ -1.4
CLRN1-206ENST00000485607 FHL2Q14192 279 aa6.3□□□□□ -1.4
CLRN1-206ENST00000485607 SPATA46Q5T0L3 261 aa6.3□□□□□ -1.4
CLRN1-206ENST00000485607 ARMC4Q5T2S8 1044 aa6.3□□□□□ -1.4
CLRN1-206ENST00000485607 LIPNQ5VXI9 398 aa6.3□□□□□ -1.4
CLRN1-206ENST00000485607 RGS7BPQ6MZT1 257 aaPredicted RBP6.3□□□□□ -1.4
CLRN1-206ENST00000485607 NANOGP8Q6NSW7 305 aa6.3□□□□□ -1.4
CLRN1-206ENST00000485607 CCDC80Q76M96 950 aa6.3□□□□□ -1.4
CLRN1-206ENST00000485607 SLC16A14Q7RTX9 510 aa6.3□□□□□ -1.4
CLRN1-206ENST00000485607 GLCCI1Q86VQ1 547 aa6.3□□□□□ -1.4
CLRN1-206ENST00000485607 CALHM3Q86XJ0 350 aa6.3□□□□□ -1.4
CLRN1-206ENST00000485607 MEX3DQ86XN8 651 aaKnown RBP6.3□□□□□ -1.4
CLRN1-206ENST00000485607 ZNF101Q8IZC7 436 aa6.3□□□□□ -1.4
CLRN1-206ENST00000485607 LRRC18Q8N456 261 aa6.3□□□□□ -1.4
CLRN1-206ENST00000485607 CLDN22Q8N7P3 220 aa6.3□□□□□ -1.4
CLRN1-206ENST00000485607 ICA1LQ8NDH6 482 aa6.3□□□□□ -1.4
CLRN1-206ENST00000485607 SEMA6DQ8NFY4 1073 aa6.3□□□□□ -1.4
CLRN1-206ENST00000485607 SYNPRQ8TBG9 265 aa6.3□□□□□ -1.4
CLRN1-206ENST00000485607 STON2Q8WXE9 905 aa6.3□□□□□ -1.4
CLRN1-206ENST00000485607 HDAC2Q92769 488 aaKnown RBP6.3□□□□□ -1.4
CLRN1-206ENST00000485607 NABP1Q96AH0 204 aa6.3□□□□□ -1.4
CLRN1-206ENST00000485607 TMEM186Q96B77 213 aa6.3□□□□□ -1.4
CLRN1-206ENST00000485607 MPP4Q96JB8 637 aa6.3□□□□□ -1.4
CLRN1-206ENST00000485607 MAGEB18Q96M61 343 aa6.3□□□□□ -1.4
CLRN1-206ENST00000485607 LRRC37BQ96QE4 947 aa6.3□□□□□ -1.4
CLRN1-206ENST00000485607 SLC19A3Q9BZV2 496 aa6.3□□□□□ -1.4
CLRN1-206ENST00000485607 METTL17Q9H7H0 456 aaPredicted RBP6.3□□□□□ -1.4
CLRN1-206ENST00000485607 RNF121Q9H920 327 aa6.3□□□□□ -1.4
CLRN1-206ENST00000485607 CDH20Q9HBT6 801 aa6.3□□□□□ -1.4
CLRN1-206ENST00000485607 HINT3Q9NQE9 182 aaKnown RBP6.3□□□□□ -1.4
CLRN1-206ENST00000485607 FBXL3Q9UKT7 428 aa6.3□□□□□ -1.4
CLRN1-206ENST00000485607 LOC100509620A0A075B734 347 aa6.29□□□□□ -1.4
CLRN1-206ENST00000485607 A0A1W2PRG6 482 aa6.29□□□□□ -1.4
CLRN1-206ENST00000485607 MCIDASD6RGH6 385 aa6.29□□□□□ -1.4
CLRN1-206ENST00000485607 MGRN1O60291 552 aa6.29□□□□□ -1.4
CLRN1-206ENST00000485607 OR7A10O76100 309 aa6.29□□□□□ -1.4
CLRN1-206ENST00000485607 FARS2O95363 451 aaKnown RBP6.29□□□□□ -1.4
CLRN1-206ENST00000485607 SNAP29O95721 258 aa6.29□□□□□ -1.4
CLRN1-206ENST00000485607 TFP02787 698 aa6.29□□□□□ -1.4
CLRN1-206ENST00000485607 HIST1H2ABP04908 130 aa6.29□□□□□ -1.4
CLRN1-206ENST00000485607 TSPAN19P0C672 248 aa6.29□□□□□ -1.4
CLRN1-206ENST00000485607 ACADSP16219 412 aa6.29□□□□□ -1.4
CLRN1-206ENST00000485607 ZNF32P17041 273 aa6.29□□□□□ -1.4
CLRN1-206ENST00000485607 MAKP20794 623 aa6.29□□□□□ -1.4
CLRN1-206ENST00000485607 MPV17P39210 176 aa6.29□□□□□ -1.4
CLRN1-206ENST00000485607 WNT5AP41221 380 aa6.29□□□□□ -1.4
CLRN1-206ENST00000485607 ZNF133P52736 654 aaPredicted RBP6.29□□□□□ -1.4
CLRN1-206ENST00000485607 UCP2P55851 309 aa6.29□□□□□ -1.4
CLRN1-206ENST00000485607 TAS2R41P59536 307 aa6.29□□□□□ -1.4
CLRN1-206ENST00000485607 MRPS11P82912 194 aaKnown RBP6.29□□□□□ -1.4
CLRN1-206ENST00000485607 TOP3AQ13472 1001 aaPredicted RBP6.29□□□□□ -1.4
CLRN1-206ENST00000485607 TBC1D28Q2M2D7 210 aa6.29□□□□□ -1.4
CLRN1-206ENST00000485607 SLC36A2Q495M3 483 aa6.29□□□□□ -1.4
CLRN1-206ENST00000485607 SPRNQ5BIV9 151 aa6.29□□□□□ -1.4
CLRN1-206ENST00000485607 PABPC1L2AQ5JQF8 200 aa6.29□□□□□ -1.4
CLRN1-206ENST00000485607 C10orf128Q5T292 105 aa6.29□□□□□ -1.4
CLRN1-206ENST00000485607 TMEM53Q6P2H8 277 aa6.29□□□□□ -1.4
CLRN1-206ENST00000485607 TMEM154Q6P9G4 183 aa6.29□□□□□ -1.4
CLRN1-206ENST00000485607 RFPL4BQ6ZWI9 263 aa6.29□□□□□ -1.4
CLRN1-206ENST00000485607 ZNF771Q7L3S4 317 aaPredicted RBP6.29□□□□□ -1.4
CLRN1-206ENST00000485607 HIST3H2AQ7L7L0 130 aa6.29□□□□□ -1.4
CLRN1-206ENST00000485607 IGFN1Q86VF2 1251 aa6.29□□□□□ -1.4
CLRN1-206ENST00000485607 SLC30A8Q8IWU4 369 aa6.29□□□□□ -1.4
CLRN1-206ENST00000485607 RBM15BQ8NDT2 890 aaKnown RBP6.29□□□□□ -1.4
CLRN1-206ENST00000485607 AKR7LQ8NHP1 331 aa6.29□□□□□ -1.4
CLRN1-206ENST00000485607 ZNF519Q8TB69 540 aa6.29□□□□□ -1.4
CLRN1-206ENST00000485607 SLC26A7Q8TE54 656 aa6.29□□□□□ -1.4
CLRN1-206ENST00000485607 TSPEARQ8WU66 669 aa6.29□□□□□ -1.4
CLRN1-206ENST00000485607 IPCEF1Q8WWN9 437 aaPredicted RBP6.29□□□□□ -1.4
CLRN1-206ENST00000485607 HIST1H2ACQ93077 130 aa6.29□□□□□ -1.4
CLRN1-206ENST00000485607 SGTBQ96EQ0 304 aa6.29□□□□□ -1.4
CLRN1-206ENST00000485607 ZNF583Q96ND8 569 aa6.29□□□□□ -1.4
CLRN1-206ENST00000485607 ZNF416Q9BWM5 594 aa6.29□□□□□ -1.4
CLRN1-206ENST00000485607 TMEM120AQ9BXJ8 343 aa6.29□□□□□ -1.4
CLRN1-206ENST00000485607 INIPQ9NRY2 104 aa6.29□□□□□ -1.4
CLRN1-206ENST00000485607 C11orf21Q9P2W6 132 aa6.29□□□□□ -1.4
CLRN1-206ENST00000485607 RIMS3Q9UJD0 308 aa6.29□□□□□ -1.4
CLRN1-206ENST00000485607 ZNF346Q9UL40 294 aaKnown RBP6.29□□□□□ -1.4
CLRN1-206ENST00000485607 LOC105371242A0A075B767 164 aa6.28□□□□□ -1.4
CLRN1-206ENST00000485607 ZSCAN5BA6NJL1 495 aa6.28□□□□□ -1.4
CLRN1-206ENST00000485607 HMGB1P1B2RPK0 211 aaPredicted RBP6.28□□□□□ -1.4
CLRN1-206ENST00000485607 OR5F1O95221 314 aa6.28□□□□□ -1.4
CLRN1-206ENST00000485607 IGHV1-46P01743 117 aa6.28□□□□□ -1.4
CLRN1-206ENST00000485607 IGHV3-13P01766 116 aa6.28□□□□□ -1.4
CLRN1-206ENST00000485607 ADRA2CP18825 462 aa6.28□□□□□ -1.4
CLRN1-206ENST00000485607 CCNOP22674 350 aa6.28□□□□□ -1.4
CLRN1-206ENST00000485607 STOMP27105 288 aa6.28□□□□□ -1.4
CLRN1-206ENST00000485607 RBM34P42696 430 aaKnown RBP6.28□□□□□ -1.4
CLRN1-206ENST00000485607 CRYBB2P43320 205 aa6.28□□□□□ -1.4
CLRN1-206ENST00000485607 DAP3P51398 398 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms