RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 SERPINB12Q96P63 405 aa2.53□□□□□ -2
SMC4-215ENST00000484799 LINC00597Q9H2U6 94 aa2.53□□□□□ -2
SMC4-215ENST00000484799 EML4Q9HC35 981 aaKnown RBP2.53□□□□□ -2
SMC4-215ENST00000484799 ZC4H2Q9NQZ6 224 aa2.53□□□□□ -2
SMC4-215ENST00000484799 CTPS2Q9NRF8 586 aa2.53□□□□□ -2
SMC4-215ENST00000484799 AHSPQ9NZD4 102 aa2.53□□□□□ -2
SMC4-215ENST00000484799 STOX2Q9P2F5 926 aaPredicted RBP2.53□□□□□ -2
SMC4-215ENST00000484799 CACNG2Q9Y698 323 aa2.53□□□□□ -2
SMC4-215ENST00000484799 CENPJQ9HC77 1338 aaPredicted RBP2.52□□□□□ -2.01
SMC4-215ENST00000484799 IGKV1D-13A0A0B4J2D9 117 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 A0A0G2JLM5 398 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 ZNF816-ZNF321PA0A0X1KG74 233 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 AIREO43918 545 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 ICOSLGO75144 302 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 KLF8O95600 359 aaPredicted RBP2.52□□□□□ -2.01
SMC4-215ENST00000484799 RAB3DO95716 219 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 S100A9P06702 114 aaKnown RBP2.52□□□□□ -2.01
SMC4-215ENST00000484799 CRYGCP07315 174 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 DCNP07585 359 aaKnown RBP2.52□□□□□ -2.01
SMC4-215ENST00000484799 RETP07949 1114 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 GIPP09681 153 aaPredicted RBP2.52□□□□□ -2.01
SMC4-215ENST00000484799 RHOXF2BP0C7M4 288 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 ACSM4P0C7M7 580 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 ZDHHC11BP0C7U3 371 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 PNMA6AP0CW24 399 aaPredicted RBP2.52□□□□□ -2.01
SMC4-215ENST00000484799 IGKV1-13P0DP09 117 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 SRMP19623 302 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 CPN2P22792 545 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 CCNE1P24864 410 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 F2RP25116 425 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 BTCP35070 178 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 CSNK1DP48730 415 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 PFN3P60673 137 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 RPS21P63220 83 aaKnown RBP2.52□□□□□ -2.01
SMC4-215ENST00000484799 IRX3P78415 501 aaPredicted RBP2.52□□□□□ -2.01
SMC4-215ENST00000484799 IFT88Q13099 833 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 SGCAQ16586 387 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 PAGE3Q5JUK9 113 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 THEM4Q5T1C6 240 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 UBE2UQ5VVX9 321 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 ANKRD22Q5VYY1 191 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 CYB5R2Q6BCY4 276 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 LCN12Q6JVE5 192 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 ABHD13Q7L211 337 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 CAMK2N1Q7Z7J9 78 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 THOC6Q86W42 341 aaKnown RBP2.52□□□□□ -2.01
SMC4-215ENST00000484799 MREGQ8N565 214 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 C20orf203Q8NBC4 194 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 INO80EQ8NBZ0 244 aaPredicted RBP2.52□□□□□ -2.01
SMC4-215ENST00000484799 PROKR2Q8NFJ6 384 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 NPBQ8NG41 125 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 OR5B3Q8NH48 314 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 MITD1Q8WV92 249 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 ECHDC3Q96DC8 303 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 TSSK3Q96PN8 268 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 CSPG4P5Q96PW8 444 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 OR5B12Q96R08 314 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 RHOXF2Q9BQY4 288 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 UCK2Q9BZX2 261 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 NEUROG2Q9H2A3 272 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 VCXQ9H320 206 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 RPF2Q9H7B2 306 aaKnown RBP2.52□□□□□ -2.01
SMC4-215ENST00000484799 C8orf33Q9H7E9 229 aaPredicted RBP2.52□□□□□ -2.01
SMC4-215ENST00000484799 CYP3A43Q9HB55 503 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 LZTFL1Q9NQ48 299 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 MMP26Q9NRE1 261 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 MYEF2Q9P2K5 600 aaKnown RBP2.52□□□□□ -2.01
SMC4-215ENST00000484799 ZNF282Q9UDV7 671 aaPredicted RBP2.52□□□□□ -2.01
SMC4-215ENST00000484799 KCNE3Q9Y6H6 103 aa2.52□□□□□ -2.01
SMC4-215ENST00000484799 KIR2DL5BA0A0G2JN68 375 aa2.51□□□□□ -2.01
SMC4-215ENST00000484799 KIR2DL5BA0A0G2JPC4 375 aa2.51□□□□□ -2.01
SMC4-215ENST00000484799 A6NDN8 102 aa2.51□□□□□ -2.01
SMC4-215ENST00000484799 SERPINE3A8MV23 424 aa2.51□□□□□ -2.01
SMC4-215ENST00000484799 F6UB75 175 aa2.51□□□□□ -2.01
SMC4-215ENST00000484799 PES1O00541 588 aaKnown RBP2.51□□□□□ -2.01
SMC4-215ENST00000484799 XRCC2O43543 280 aa2.51□□□□□ -2.01
SMC4-215ENST00000484799 NPIPB7O75200 414 aa2.51□□□□□ -2.01
SMC4-215ENST00000484799 FKBP6O75344 327 aa2.51□□□□□ -2.01
SMC4-215ENST00000484799 HSBP1O75506 76 aa2.51□□□□□ -2.01
SMC4-215ENST00000484799 FCN3O75636 299 aa2.51□□□□□ -2.01
SMC4-215ENST00000484799 SRP72O76094 671 aaKnown RBP2.51□□□□□ -2.01
SMC4-215ENST00000484799 LSM8O95777 96 aaKnown RBP2.51□□□□□ -2.01
SMC4-215ENST00000484799 AIFM1O95831 613 aa2.51□□□□□ -2.01
SMC4-215ENST00000484799 HBE1P02100 147 aa2.51□□□□□ -2.01
SMC4-215ENST00000484799 IFNW1P05000 195 aa2.51□□□□□ -2.01
SMC4-215ENST00000484799 CLTAP09496 248 aa2.51□□□□□ -2.01
SMC4-215ENST00000484799 CD82P27701 267 aa2.51□□□□□ -2.01
SMC4-215ENST00000484799 GPX4P36969 197 aaPredicted RBP2.51□□□□□ -2.01
SMC4-215ENST00000484799 FGF8P55075 233 aaPredicted RBP2.51□□□□□ -2.01
SMC4-215ENST00000484799 NUTF2P61970 127 aaKnown RBP2.51□□□□□ -2.01
SMC4-215ENST00000484799 SP4Q02446 784 aa2.51□□□□□ -2.01
SMC4-215ENST00000484799 SLC25A11Q02978 314 aaKnown RBP2.51□□□□□ -2.01
SMC4-215ENST00000484799 QPRTQ15274 297 aa2.51□□□□□ -2.01
SMC4-215ENST00000484799 OR7A5Q15622 319 aa2.51□□□□□ -2.01
SMC4-215ENST00000484799 ZNF691Q5VV52 312 aa2.51□□□□□ -2.01
SMC4-215ENST00000484799 TEX43Q6ZNM6 134 aa2.51□□□□□ -2.01
SMC4-215ENST00000484799 COX15Q7KZN9 410 aa2.51□□□□□ -2.01
SMC4-215ENST00000484799 OAFQ86UD1 273 aa2.51□□□□□ -2.01
SMC4-215ENST00000484799 KIR2DL5AQ8N109 375 aa2.51□□□□□ -2.01
SMC4-215ENST00000484799 ZNF433Q8N7K0 673 aaPredicted RBP2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms