RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 DPY19L2P2Q6ZN68 376 aa10.54□□□□□ -0.72
MSH5-216ENST00000484309 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.54□□□□□ -0.72
MSH5-216ENST00000484309 ZNF101Q8IZC7 436 aa10.54□□□□□ -0.72
MSH5-216ENST00000484309 OR1J1Q8NGS3 322 aa10.54□□□□□ -0.72
MSH5-216ENST00000484309 BCAS4Q8TDM0 211 aa10.54□□□□□ -0.72
MSH5-216ENST00000484309 POM121L2Q96KW2 1035 aa10.54□□□□□ -0.72
MSH5-216ENST00000484309 SAMD8Q96LT4 415 aa10.54□□□□□ -0.72
MSH5-216ENST00000484309 TSSK2Q96PF2 358 aa10.54□□□□□ -0.72
MSH5-216ENST00000484309 IFT27Q9BW83 186 aa10.54□□□□□ -0.72
MSH5-216ENST00000484309 FN3KQ9H479 309 aa10.54□□□□□ -0.72
MSH5-216ENST00000484309 VNN3Q9NY84 501 aa10.54□□□□□ -0.72
MSH5-216ENST00000484309 TAS2R1Q9NYW7 299 aa10.54□□□□□ -0.72
MSH5-216ENST00000484309 TAAR3PQ9P1P4 343 aa10.54□□□□□ -0.72
MSH5-216ENST00000484309 REV1Q9UBZ9 1251 aa10.54□□□□□ -0.72
MSH5-216ENST00000484309 COA3Q9Y2R0 106 aaPredicted RBP10.54□□□□□ -0.72
MSH5-216ENST00000484309 LYVE1Q9Y5Y7 322 aa10.54□□□□□ -0.72
MSH5-216ENST00000484309 TANC2Q9HCD6 1990 aa10.54□□□□□ -0.72
MSH5-216ENST00000484309 VWC2LB2RUY7 222 aa10.53□□□□□ -0.72
MSH5-216ENST00000484309 TNFRSF11BO00300 401 aa10.53□□□□□ -0.72
MSH5-216ENST00000484309 CD5LO43866 347 aa10.53□□□□□ -0.72
MSH5-216ENST00000484309 KHDRBS3O75525 346 aaKnown RBP10.53□□□□□ -0.72
MSH5-216ENST00000484309 UBOX5O94941 541 aa10.53□□□□□ -0.72
MSH5-216ENST00000484309 ZNF16P17020 682 aaPredicted RBP10.53□□□□□ -0.72
MSH5-216ENST00000484309 USF1P22415 310 aaPredicted RBP10.53□□□□□ -0.72
MSH5-216ENST00000484309 FPR3P25089 353 aa10.53□□□□□ -0.72
MSH5-216ENST00000484309 SLC6A6P31641 620 aa10.53□□□□□ -0.72
MSH5-216ENST00000484309 NR4A2P43354 598 aa10.53□□□□□ -0.72
MSH5-216ENST00000484309 GSSP48637 474 aa10.53□□□□□ -0.72
MSH5-216ENST00000484309 UCP2P55851 309 aa10.53□□□□□ -0.72
MSH5-216ENST00000484309 LOXL1Q08397 574 aaPredicted RBP10.53□□□□□ -0.72
MSH5-216ENST00000484309 NKPD1Q17RQ9 610 aa10.53□□□□□ -0.72
MSH5-216ENST00000484309 RFX4Q33E94 735 aa10.53□□□□□ -0.72
MSH5-216ENST00000484309 MTX3Q5HYI7 312 aa10.53□□□□□ -0.72
MSH5-216ENST00000484309 LEG1Q6P5S2 330 aa10.53□□□□□ -0.72
MSH5-216ENST00000484309 RFPL4BQ6ZWI9 263 aa10.53□□□□□ -0.72
MSH5-216ENST00000484309 TRPM8Q7Z2W7 1104 aa10.53□□□□□ -0.72
MSH5-216ENST00000484309 ARHGAP24Q8N264 748 aa10.53□□□□□ -0.72
MSH5-216ENST00000484309 OR4K13Q8NH42 304 aa10.53□□□□□ -0.72
MSH5-216ENST00000484309 SYNPRQ8TBG9 265 aa10.53□□□□□ -0.72
MSH5-216ENST00000484309 GNPDA2Q8TDQ7 276 aa10.53□□□□□ -0.72
MSH5-216ENST00000484309 NEU4Q8WWR8 484 aaPredicted RBP10.53□□□□□ -0.72
MSH5-216ENST00000484309 GTF3AQ92664 365 aaKnown RBP10.53□□□□□ -0.72
MSH5-216ENST00000484309 BTBD10Q9BSF8 475 aa10.53□□□□□ -0.72
MSH5-216ENST00000484309 THTPAQ9BU02 230 aa10.53□□□□□ -0.72
MSH5-216ENST00000484309 BPESC1Q9GZL8 116 aa10.53□□□□□ -0.72
MSH5-216ENST00000484309 NUAK2Q9H093 628 aa10.53□□□□□ -0.72
MSH5-216ENST00000484309 MUC13Q9H3R2 512 aa10.53□□□□□ -0.72
MSH5-216ENST00000484309 EGLN3Q9H6Z9 239 aa10.53□□□□□ -0.72
MSH5-216ENST00000484309 VSX1Q9NZR4 365 aaPredicted RBP10.53□□□□□ -0.72
MSH5-216ENST00000484309 PRPF19Q9UMS4 504 aaKnown RBP10.53□□□□□ -0.72
MSH5-216ENST00000484309 TIMM10BQ9Y5J6 103 aa10.53□□□□□ -0.72
MSH5-216ENST00000484309 ANK3Q12955 4377 aaKnown RBP10.52□□□□□ -0.73
MSH5-216ENST00000484309 IGHV4-61A0A0C4DH41 118 aa10.52□□□□□ -0.73
MSH5-216ENST00000484309 LOC390937A0A1W2PQ73 354 aa10.52□□□□□ -0.73
MSH5-216ENST00000484309 C12orf71A8MTZ7 269 aa10.52□□□□□ -0.73
MSH5-216ENST00000484309 DCTN6O00399 190 aa10.52□□□□□ -0.73
MSH5-216ENST00000484309 DOK2O60496 412 aa10.52□□□□□ -0.73
MSH5-216ENST00000484309 NCR1O76036 304 aa10.52□□□□□ -0.73
MSH5-216ENST00000484309 STAMBPO95630 424 aa10.52□□□□□ -0.73
MSH5-216ENST00000484309 TXNDC12O95881 172 aa10.52□□□□□ -0.73
MSH5-216ENST00000484309 HPXP02790 462 aa10.52□□□□□ -0.73
MSH5-216ENST00000484309 HIST1H1CP16403 213 aaKnown RBP10.52□□□□□ -0.73
MSH5-216ENST00000484309 IFNGR2P38484 337 aa10.52□□□□□ -0.73
MSH5-216ENST00000484309 MPV17P39210 176 aa10.52□□□□□ -0.73
MSH5-216ENST00000484309 RAD52P43351 418 aa10.52□□□□□ -0.73
MSH5-216ENST00000484309 MAGEA2P43356 314 aa10.52□□□□□ -0.73
MSH5-216ENST00000484309 EVX1P49640 407 aa10.52□□□□□ -0.73
MSH5-216ENST00000484309 KLF3P57682 345 aaPredicted RBP10.52□□□□□ -0.73
MSH5-216ENST00000484309 PCBD1P61457 104 aa10.52□□□□□ -0.73
MSH5-216ENST00000484309 TSPAN31Q12999 210 aa10.52□□□□□ -0.73
MSH5-216ENST00000484309 MEP1BQ16820 701 aa10.52□□□□□ -0.73
MSH5-216ENST00000484309 CLEC12AQ5QGZ9 265 aa10.52□□□□□ -0.73
MSH5-216ENST00000484309 SLC35F1Q5T1Q4 408 aa10.52□□□□□ -0.73
MSH5-216ENST00000484309 C1orf94Q6P1W5 598 aa10.52□□□□□ -0.73
MSH5-216ENST00000484309 ZNF620Q6ZNG0 422 aa10.52□□□□□ -0.73
MSH5-216ENST00000484309 ADCK1Q86TW2 530 aa10.52□□□□□ -0.73
MSH5-216ENST00000484309 JAZF1Q86VZ6 243 aa10.52□□□□□ -0.73
MSH5-216ENST00000484309 ALDH16A1Q8IZ83 802 aa10.52□□□□□ -0.73
MSH5-216ENST00000484309 SDR9C7Q8NEX9 313 aa10.52□□□□□ -0.73
MSH5-216ENST00000484309 OR4C15Q8NGM1 316 aa10.52□□□□□ -0.73
MSH5-216ENST00000484309 ABHD4Q8TB40 342 aa10.52□□□□□ -0.73
MSH5-216ENST00000484309 UBASH3BQ8TF42 649 aa10.52□□□□□ -0.73
MSH5-216ENST00000484309 C11orf40Q8WZ69 217 aa10.52□□□□□ -0.73
MSH5-216ENST00000484309 SLC7A6Q92536 515 aa10.52□□□□□ -0.73
MSH5-216ENST00000484309 LRGUKQ96M69 825 aa10.52□□□□□ -0.73
MSH5-216ENST00000484309 NMNAT3Q96T66 252 aa10.52□□□□□ -0.73
MSH5-216ENST00000484309 BCL2L14Q9BZR8 327 aa10.52□□□□□ -0.73
MSH5-216ENST00000484309 SRA1Q9HD15 236 aaKnown RBP10.52□□□□□ -0.73
MSH5-216ENST00000484309 MYOZ1Q9NP98 299 aaPredicted RBP10.52□□□□□ -0.73
MSH5-216ENST00000484309 FBXO9Q9UK97 447 aaPredicted RBP10.52□□□□□ -0.73
MSH5-216ENST00000484309 POLR1DQ9Y2S0 133 aa10.52□□□□□ -0.73
MSH5-216ENST00000484309 U3KQV3 271 aa10.52□□□□□ -0.73
MSH5-216ENST00000484309 LRP5LA4QPB2 252 aa10.51□□□□□ -0.73
MSH5-216ENST00000484309 NDUFS8O00217 210 aa10.51□□□□□ -0.73
MSH5-216ENST00000484309 SGCEO43556 437 aa10.51□□□□□ -0.73
MSH5-216ENST00000484309 AHCYL1O43865 530 aa10.51□□□□□ -0.73
MSH5-216ENST00000484309 KRT36O76013 467 aa10.51□□□□□ -0.73
MSH5-216ENST00000484309 CCNB2O95067 398 aa10.51□□□□□ -0.73
MSH5-216ENST00000484309 NGFP01138 241 aa10.51□□□□□ -0.73
MSH5-216ENST00000484309 IGHV4-31P0DP07 118 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms