RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 SPHARQ15513 63 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 EIF2S3LQ2VIR3 472 aaKnown RBP7.24□□□□□ -1.25
USP4-210ENST00000483212 FAM27BQ5VT28 67 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 FBXW9Q5XUX1 488 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 CFAP77Q6ZQR2 320 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 NCCRP1Q6ZVX7 275 aaPredicted RBP7.24□□□□□ -1.25
USP4-210ENST00000483212 BTLAQ7Z6A9 289 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 SATL1Q86VE3 508 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 LINC00346Q8IVM7 164 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 ZNF100Q8IYN0 542 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 KLHL36Q8N4N3 616 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 ZNF454Q8N9F8 522 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 OR52N5Q8NH56 324 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 SPRYD4Q8WW59 207 aaPredicted RBP7.24□□□□□ -1.25
USP4-210ENST00000483212 MAP6Q96JE9 813 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 OPALINQ96PE5 141 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 OR8B4Q96RC9 309 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 ABHD6Q9BV23 337 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 ZNF416Q9BWM5 594 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 RBM24Q9BX46 236 aaKnown RBP7.24□□□□□ -1.25
USP4-210ENST00000483212 TTTY10Q9BZA0 68 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 RBM38Q9H0Z9 239 aaKnown RBP7.24□□□□□ -1.25
USP4-210ENST00000483212 SEC61A2Q9H9S3 476 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 SIAEQ9HAT2 523 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 ISYNA1Q9NPH2 558 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 PNRC2Q9NPJ4 139 aaKnown RBP7.24□□□□□ -1.25
USP4-210ENST00000483212 ZNF224Q9NZL3 707 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 MRM2Q9UI43 246 aaKnown RBP7.24□□□□□ -1.25
USP4-210ENST00000483212 ERGIC3Q9Y282 383 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 CAB39Q9Y376 341 aaPredicted RBP7.24□□□□□ -1.25
USP4-210ENST00000483212 TMEM14AQ9Y6G1 99 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 KALRNO60229 2985 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 MED12LQ86YW9 2145 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 DOCK7Q96N67 2140 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 CFAP46Q8IYW2 2715 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 A0A0G2JNJ9 132 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 DPPA5A6NC42 116 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 ZNF587BE7ETH6 402 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 E9PI62 339 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 PHYHO14832 338 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 IL2RAP01589 272 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 CST2P09228 141 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 MMP7P09237 267 aaPredicted RBP7.23□□□□□ -1.25
USP4-210ENST00000483212 CD8BP10966 210 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 B4GALT1P15291 398 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 ZNF823P16415 610 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 COX5AP20674 150 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 IGHV1-2P23083 117 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 CTSSP25774 331 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 MPGP29372 298 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 LIPAP38571 399 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 OPRL1P41146 370 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 CA7P43166 264 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 OR12D2P58182 307 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 ACTA2P62736 377 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 ACTG2P63267 376 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 ARF1P84077 181 aaKnown RBP7.23□□□□□ -1.25
USP4-210ENST00000483212 EGR3Q06889 387 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 FAPQ12884 760 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 MLLT11Q13015 90 aaPredicted RBP7.23□□□□□ -1.25
USP4-210ENST00000483212 EIF2B1Q14232 305 aaKnown RBP7.23□□□□□ -1.25
USP4-210ENST00000483212 MED22Q15528 200 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 SSX1Q16384 188 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 TIGD6Q17RP2 521 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 TP53I3Q53FA7 332 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 CORO6Q6QEF8 472 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 KLHL24Q6TFL4 600 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 VASH1Q7L8A9 365 aaPredicted RBP7.23□□□□□ -1.25
USP4-210ENST00000483212 DCXRQ7Z4W1 244 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.23□□□□□ -1.25
USP4-210ENST00000483212 ATCAYQ86WG3 371 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 EGFL6Q8IUX8 553 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 GABRG1Q8N1C3 465 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 SLC22A24Q8N4F4 322 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 CNEP1R1Q8N9A8 125 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 OR10H5Q8NGA6 315 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 OR1K1Q8NGR3 316 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 FGFBP3Q8TAT2 258 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 RPS4Y2Q8TD47 263 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 RNF133Q8WVZ7 376 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 GATAD2BQ8WXI9 593 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 ASB17Q8WXJ9 295 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 RORBQ92753 470 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 YIPF6Q96EC8 236 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 FBXO17Q96EF6 278 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 PELI1Q96FA3 418 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 BOD1Q96IK1 185 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 C4orf36Q96KX1 117 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 BBC3Q96PG8 261 aaPredicted RBP7.23□□□□□ -1.25
USP4-210ENST00000483212 MGLLQ99685 303 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 SFXN3Q9BWM7 321 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 ACOXLQ9NUZ1 547 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 CHCHD3Q9NX63 227 aaKnown RBP7.23□□□□□ -1.25
USP4-210ENST00000483212 SLCO1C1Q9NYB5 712 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 ASH2LQ9UBL3 628 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 Q9UFV3 132 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 ST6GALNAC2Q9UJ37 374 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 LAMP5Q9UJQ1 280 aa7.23□□□□□ -1.25
USP4-210ENST00000483212 GDF2Q9UK05 429 aaPredicted RBP7.23□□□□□ -1.25
USP4-210ENST00000483212 MEMO1Q9Y316 297 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms