RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 ABHD13Q7L211 337 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 SNX20Q7Z614 316 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 ZBED8Q8IZ13 594 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 KIF2BQ8N4N8 673 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 HSD17B11Q8NBQ5 300 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 NOXO1Q8NFA2 376 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 OTUB2Q96DC9 234 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 NIPSNAP3BQ9BS92 247 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 QTRT1Q9BXR0 403 aaKnown RBP2.74□□□□□ -1.97
SMC6-208ENST00000481708 FBXL3Q9UKT7 428 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 KCNIP3Q9Y2W7 256 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 MN1Q10571 1320 aaPredicted RBP2.74□□□□□ -1.97
SMC6-208ENST00000481708 VPS13DQ5THJ4 4388 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 A0A1W2PNU3 283 aaPredicted RBP2.74□□□□□ -1.97
SMC6-208ENST00000481708 M0R3G1 203 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 CXCL13O43927 109 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 PCDH7O60245 1069 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 OR10H3O60404 316 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 KRT33AO76009 404 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 H2BFMP0C1H6 154 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 ATF6P18850 670 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 EDNRAP25101 427 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 HTR2CP28335 458 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 NUDT1P36639 197 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 GLUD2P49448 558 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 RPS18P62269 152 aaKnown RBP2.74□□□□□ -1.97
SMC6-208ENST00000481708 PAX2Q02962 417 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 Q0VFX4 171 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 CD226Q15762 336 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 TMEM35AQ53FP2 167 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 FAM78AQ5JUQ0 283 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 SAMD4BQ5PRF9 694 aaKnown RBP2.74□□□□□ -1.97
SMC6-208ENST00000481708 LRRC31Q6UY01 552 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 NUDCD3Q8IVD9 361 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 KIRREL3Q8IZU9 778 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 OR5AR1Q8NGP9 310 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 ESR2Q92731 530 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 TMEM143Q96AN5 459 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 ZNF488Q96MN9 340 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 ZNF641Q96N77 438 aaPredicted RBP2.74□□□□□ -1.97
SMC6-208ENST00000481708 SLC25A33Q9BSK2 321 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 GAREM1Q9H706 876 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 KIR3DX1Q9H7L2 352 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 TXLNGQ9NUQ3 528 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 OCIAD1Q9NX40 245 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 B4GALT7Q9UBV7 327 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 MMP17Q9ULZ9 603 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 NEU3Q9UQ49 428 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 SPTBN4Q9H254 2564 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 PHF3Q92576 2039 aaKnown RBP2.74□□□□□ -1.97
SMC6-208ENST00000481708 A0A0J9YVX5 310 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 IQANK1A0A1B0GTG1 560 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 FCN1O00602 326 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 PPP1R2P9O14990 202 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 ZMPSTE24O75844 475 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 SEC24AO95486 1093 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 CDH1P12830 882 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 ZNF7P17097 686 aaPredicted RBP2.73□□□□□ -1.97
SMC6-208ENST00000481708 G0S2P27469 103 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 MAP3K8P41279 467 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 KIR2DS4P43632 304 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 GNG10P50151 68 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 ERVPABLB-1P60509 514 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 SNRPFP62306 86 aaKnown RBP2.73□□□□□ -1.97
SMC6-208ENST00000481708 NTHL1P78549 312 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 ELAVL2Q12926 359 aaKnown RBP2.73□□□□□ -1.97
SMC6-208ENST00000481708 MTF1Q14872 753 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 RAB35Q15286 201 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 MTX3Q5HYI7 312 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 TIMM23BQ5SRD1 257 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 RFPL4BQ6ZWI9 263 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 PIGZQ86VD9 579 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 CBLN2Q8IUK8 224 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 OR4K2Q8NGD2 314 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 RNASEH2CQ8TDP1 164 aaKnown RBP2.73□□□□□ -1.97
SMC6-208ENST00000481708 SERPINB11Q96P15 392 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 MS4A4EQ96PG1 132 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 RSG1Q9BU20 258 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 DERL2Q9GZP9 239 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 KIF25Q9UIL4 384 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 MYO6Q9UM54 1294 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 EP300Q09472 2414 aaPredicted RBP2.73□□□□□ -1.97
SMC6-208ENST00000481708 TCRBV9S1A1TA0A576 114 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 H3BN98 237 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 CHMP2AO43633 222 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 LRATO95237 230 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 CTDNEP1O95476 244 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 NADKO95544 446 aaPredicted RBP2.73□□□□□ -1.97
SMC6-208ENST00000481708 SMIM10L1P0DMW3 83 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 IVDP26440 423 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 TUFMP49411 452 aaKnown RBP2.73□□□□□ -1.97
SMC6-208ENST00000481708 OR10A3P58181 314 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 VBP1P61758 197 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 TUBA4AP68366 448 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 DAZAP2Q15038 168 aaPredicted RBP2.73□□□□□ -1.97
SMC6-208ENST00000481708 CYTH1Q15438 398 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 HAGHQ16775 308 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 CCDC14Q49A88 953 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 ACTL10Q5JWF8 245 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 BSPRYQ5W0U4 402 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms