RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 AQP6Q13520 282 aa17.73■□□□□ 0.43
VARS-224ENST00000479051 ENDOGQ14249 297 aaKnown RBP17.73■□□□□ 0.43
VARS-224ENST00000479051 SLC27A4Q6P1M0 643 aa17.73■□□□□ 0.43
VARS-224ENST00000479051 ZBTB46Q86UZ6 589 aa17.73■□□□□ 0.43
VARS-224ENST00000479051 OR6V1Q8N148 313 aa17.73■□□□□ 0.43
VARS-224ENST00000479051 NPEPL1Q8NDH3 523 aa17.73■□□□□ 0.43
VARS-224ENST00000479051 OR10H5Q8NGA6 315 aa17.73■□□□□ 0.43
VARS-224ENST00000479051 OR4Q3Q8NH05 313 aa17.73■□□□□ 0.43
VARS-224ENST00000479051 PYDC1Q8WXC3 89 aa17.73■□□□□ 0.43
VARS-224ENST00000479051 LRTOMTQ8WZ04 291 aa17.73■□□□□ 0.43
VARS-224ENST00000479051 PERPQ96FX8 193 aa17.73■□□□□ 0.43
VARS-224ENST00000479051 CENPNQ96H22 339 aaPredicted RBP17.73■□□□□ 0.43
VARS-224ENST00000479051 TSSK2Q96PF2 358 aa17.73■□□□□ 0.43
VARS-224ENST00000479051 OR2H1Q9GZK4 316 aa17.73■□□□□ 0.43
VARS-224ENST00000479051 PAPOLBQ9NRJ5 636 aaKnown RBP17.73■□□□□ 0.43
VARS-224ENST00000479051 REV1Q9UBZ9 1251 aa17.73■□□□□ 0.43
VARS-224ENST00000479051 PLCE1Q9P212 2302 aa17.73■□□□□ 0.43
VARS-224ENST00000479051 IGLV1-36A0A0B4J1U3 117 aa17.72■□□□□ 0.43
VARS-224ENST00000479051 HLA-DQA2P01906 255 aa17.72■□□□□ 0.43
VARS-224ENST00000479051 PAX1P15863 534 aa17.72■□□□□ 0.43
VARS-224ENST00000479051 STOMP27105 288 aa17.72■□□□□ 0.43
VARS-224ENST00000479051 SERPINF1P36955 418 aa17.72■□□□□ 0.43
VARS-224ENST00000479051 PTH2RP49190 550 aa17.72■□□□□ 0.43
VARS-224ENST00000479051 GDI2P50395 445 aaKnown RBP17.72■□□□□ 0.43
VARS-224ENST00000479051 NKX6-1P78426 367 aaPredicted RBP17.72■□□□□ 0.43
VARS-224ENST00000479051 PSG4Q00888 419 aa17.72■□□□□ 0.43
VARS-224ENST00000479051 TESK1Q15569 626 aa17.72■□□□□ 0.43
VARS-224ENST00000479051 KCNMB1Q16558 191 aa17.72■□□□□ 0.43
VARS-224ENST00000479051 UNQ6126/PRO20091Q6UXV3 157 aa17.72■□□□□ 0.43
VARS-224ENST00000479051 AMIGO2Q86SJ2 522 aa17.72■□□□□ 0.43
VARS-224ENST00000479051 CYB561A3Q8NBI2 242 aa17.72■□□□□ 0.43
VARS-224ENST00000479051 SLC37A3Q8NCC5 494 aa17.72■□□□□ 0.43
VARS-224ENST00000479051 PROKR2Q8NFJ6 384 aa17.72■□□□□ 0.43
VARS-224ENST00000479051 AKR7LQ8NHP1 331 aa17.72■□□□□ 0.43
VARS-224ENST00000479051 C11orf40Q8WZ69 217 aa17.72■□□□□ 0.43
VARS-224ENST00000479051 FN3KQ9H479 309 aa17.72■□□□□ 0.43
VARS-224ENST00000479051 ZNF701Q9NV72 531 aaPredicted RBP17.72■□□□□ 0.43
VARS-224ENST00000479051 FBXO9Q9UK97 447 aaPredicted RBP17.72■□□□□ 0.43
VARS-224ENST00000479051 NDRG4Q9ULP0 352 aaKnown RBP17.72■□□□□ 0.43
VARS-224ENST00000479051 PMF1-BGLAPU3KQ54 211 aa17.72■□□□□ 0.43
VARS-224ENST00000479051 OVOL3O00110 214 aa17.71■□□□□ 0.43
VARS-224ENST00000479051 DCTN6O00399 190 aa17.71■□□□□ 0.43
VARS-224ENST00000479051 SNAP29O95721 258 aa17.71■□□□□ 0.43
VARS-224ENST00000479051 CD8AP01732 235 aa17.71■□□□□ 0.43
VARS-224ENST00000479051 HMGN1P05114 100 aa17.71■□□□□ 0.43
VARS-224ENST00000479051 SCG5P05408 212 aa17.71■□□□□ 0.43
VARS-224ENST00000479051 PAICSP22234 425 aaKnown RBP17.71■□□□□ 0.43
VARS-224ENST00000479051 APEX1P27695 318 aaKnown RBP17.71■□□□□ 0.43
VARS-224ENST00000479051 THBS4P35443 961 aa17.71■□□□□ 0.43
VARS-224ENST00000479051 ATP5J2P56134 94 aa17.71■□□□□ 0.43
VARS-224ENST00000479051 SNRPD2P62316 118 aaKnown RBP17.71■□□□□ 0.43
VARS-224ENST00000479051 GINS1Q14691 196 aa17.71■□□□□ 0.43
VARS-224ENST00000479051 SHEQ5VZ18 495 aa17.71■□□□□ 0.43
VARS-224ENST00000479051 FAHD1Q6P587 224 aa17.71■□□□□ 0.43
VARS-224ENST00000479051 UGT2A3Q6UWM9 527 aa17.71■□□□□ 0.43
VARS-224ENST00000479051 SPNS3Q6ZMD2 512 aa17.71■□□□□ 0.43
VARS-224ENST00000479051 CPEB3Q8NE35 698 aaKnown RBP17.71■□□□□ 0.43
VARS-224ENST00000479051 CMC2Q9NRP2 79 aa17.71■□□□□ 0.43
VARS-224ENST00000479051 EIF3KQ9UBQ5 218 aaKnown RBP17.71■□□□□ 0.43
VARS-224ENST00000479051 ENOPH1Q9UHY7 261 aa17.71■□□□□ 0.43
VARS-224ENST00000479051 CMAHPQ9Y471 501 aa17.71■□□□□ 0.43
VARS-224ENST00000479051 CSMD1Q96PZ7 3565 aa17.7■□□□□ 0.42
VARS-224ENST00000479051 B9A039 149 aa17.7■□□□□ 0.42
VARS-224ENST00000479051 MPZL1O95297 269 aa17.7■□□□□ 0.42
VARS-224ENST00000479051 OR4A8P0C604 315 aa17.7■□□□□ 0.42
VARS-224ENST00000479051 GAAP10253 952 aa17.7■□□□□ 0.42
VARS-224ENST00000479051 CCNOP22674 350 aa17.7■□□□□ 0.42
VARS-224ENST00000479051 GLRXP35754 106 aa17.7■□□□□ 0.42
VARS-224ENST00000479051 CDKN1AP38936 164 aa17.7■□□□□ 0.42
VARS-224ENST00000479051 RAD52P43351 418 aa17.7■□□□□ 0.42
VARS-224ENST00000479051 SLC25A1P53007 311 aa17.7■□□□□ 0.42
VARS-224ENST00000479051 CRMP1Q14194 572 aa17.7■□□□□ 0.42
VARS-224ENST00000479051 ADIPOQQ15848 244 aa17.7■□□□□ 0.42
VARS-224ENST00000479051 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.7■□□□□ 0.42
VARS-224ENST00000479051 PARP8Q8N3A8 854 aa17.7■□□□□ 0.42
VARS-224ENST00000479051 IQCF1Q8N6M8 205 aa17.7■□□□□ 0.42
VARS-224ENST00000479051 CDADC1Q9BWV3 514 aa17.7■□□□□ 0.42
VARS-224ENST00000479051 CACNG6Q9BXT2 260 aa17.7■□□□□ 0.42
VARS-224ENST00000479051 WNT5BQ9H1J7 359 aa17.7■□□□□ 0.42
VARS-224ENST00000479051 KRT84Q9NSB2 600 aa17.7■□□□□ 0.42
VARS-224ENST00000479051 ASH2LQ9UBL3 628 aa17.7■□□□□ 0.42
VARS-224ENST00000479051 C5orf49A4QMS7 147 aa17.69■□□□□ 0.42
VARS-224ENST00000479051 SGCEO43556 437 aa17.69■□□□□ 0.42
VARS-224ENST00000479051 DOK2O60496 412 aa17.69■□□□□ 0.42
VARS-224ENST00000479051 COX5BP10606 129 aa17.69■□□□□ 0.42
VARS-224ENST00000479051 CCL2P13500 99 aa17.69■□□□□ 0.42
VARS-224ENST00000479051 ZNF823P16415 610 aa17.69■□□□□ 0.42
VARS-224ENST00000479051 PCSK6P29122 969 aa17.69■□□□□ 0.42
VARS-224ENST00000479051 DAPP51397 102 aa17.69■□□□□ 0.42
VARS-224ENST00000479051 BLVRAP53004 296 aa17.69■□□□□ 0.42
VARS-224ENST00000479051 TEKQ02763 1124 aa17.69■□□□□ 0.42
VARS-224ENST00000479051 EFNB3Q15768 340 aa17.69■□□□□ 0.42
VARS-224ENST00000479051 ZNF362Q5T0B9 420 aaPredicted RBP17.69■□□□□ 0.42
VARS-224ENST00000479051 C11orf71Q6IPW1 123 aa17.69■□□□□ 0.42
VARS-224ENST00000479051 ZNF774Q6NX45 483 aa17.69■□□□□ 0.42
VARS-224ENST00000479051 ARL9Q6T311 187 aa17.69■□□□□ 0.42
VARS-224ENST00000479051 ICA1LQ8NDH6 482 aa17.69■□□□□ 0.42
VARS-224ENST00000479051 GJC3Q8NFK1 279 aa17.69■□□□□ 0.42
VARS-224ENST00000479051 SLC26A10Q8NG04 563 aa17.69■□□□□ 0.42
VARS-224ENST00000479051 PLEKHA8Q96JA3 519 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms