RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 JMJD8Q96S16 334 aa14.13□□□□□ -0.15
TRIM13-208ENST00000478111 GAL3ST1Q99999 423 aa14.13□□□□□ -0.15
TRIM13-208ENST00000478111 SUCNR1Q9BXA5 334 aa14.13□□□□□ -0.15
TRIM13-208ENST00000478111 C7orf69Q9H7B7 122 aa14.13□□□□□ -0.15
TRIM13-208ENST00000478111 MSL2Q9HCI7 577 aa14.13□□□□□ -0.15
TRIM13-208ENST00000478111 CYSLTR2Q9NS75 346 aa14.13□□□□□ -0.15
TRIM13-208ENST00000478111 TIMM10BQ9Y5J6 103 aa14.13□□□□□ -0.15
TRIM13-208ENST00000478111 DOCK11Q5JSL3 2073 aa14.13□□□□□ -0.15
TRIM13-208ENST00000478111 CMYA5Q8N3K9 4069 aa14.12□□□□□ -0.15
TRIM13-208ENST00000478111 GMNCA6NCL1 334 aa14.12□□□□□ -0.15
TRIM13-208ENST00000478111 HMGB1P1B2RPK0 211 aaPredicted RBP14.12□□□□□ -0.15
TRIM13-208ENST00000478111 H3BSA7 217 aa14.12□□□□□ -0.15
TRIM13-208ENST00000478111 NPPAP01160 153 aa14.12□□□□□ -0.15
TRIM13-208ENST00000478111 NR2C1P13056 603 aa14.12□□□□□ -0.15
TRIM13-208ENST00000478111 IFI30P13284 250 aa14.12□□□□□ -0.15
TRIM13-208ENST00000478111 GATA3P23771 443 aa14.12□□□□□ -0.15
TRIM13-208ENST00000478111 KDELR2P33947 212 aa14.12□□□□□ -0.15
TRIM13-208ENST00000478111 LIPAP38571 399 aa14.12□□□□□ -0.15
TRIM13-208ENST00000478111 LIMS1P48059 325 aa14.12□□□□□ -0.15
TRIM13-208ENST00000478111 CTXN1P60606 82 aa14.12□□□□□ -0.15
TRIM13-208ENST00000478111 LCN2P80188 198 aa14.12□□□□□ -0.15
TRIM13-208ENST00000478111 PSG7Q13046 419 aa14.12□□□□□ -0.15
TRIM13-208ENST00000478111 CDK5R2Q13319 367 aa14.12□□□□□ -0.15
TRIM13-208ENST00000478111 ERICH5Q6P6B1 374 aa14.12□□□□□ -0.15
TRIM13-208ENST00000478111 UNQ6126/PRO20091Q6UXV3 157 aa14.12□□□□□ -0.15
TRIM13-208ENST00000478111 ZNF771Q7L3S4 317 aaPredicted RBP14.12□□□□□ -0.15
TRIM13-208ENST00000478111 IGFN1Q86VF2 1251 aa14.12□□□□□ -0.15
TRIM13-208ENST00000478111 ALDH16A1Q8IZ83 802 aa14.12□□□□□ -0.15
TRIM13-208ENST00000478111 TMEM120AQ9BXJ8 343 aa14.12□□□□□ -0.15
TRIM13-208ENST00000478111 EGLN1Q9GZT9 426 aa14.12□□□□□ -0.15
TRIM13-208ENST00000478111 MAN2C1Q9NTJ4 1040 aa14.12□□□□□ -0.15
TRIM13-208ENST00000478111 ZDHHC8Q9ULC8 765 aa14.12□□□□□ -0.15
TRIM13-208ENST00000478111 PPIAL4EA0A075B759 164 aa14.11□□□□□ -0.15
TRIM13-208ENST00000478111 PPIAL4CA0A0B4J2A2 164 aa14.11□□□□□ -0.15
TRIM13-208ENST00000478111 HTR3EA5X5Y0 456 aa14.11□□□□□ -0.15
TRIM13-208ENST00000478111 PPIAL4DF5H284 164 aa14.11□□□□□ -0.15
TRIM13-208ENST00000478111 WIPF1O43516 503 aa14.11□□□□□ -0.15
TRIM13-208ENST00000478111 IFNA14P01570 189 aa14.11□□□□□ -0.15
TRIM13-208ENST00000478111 IGHV2-70P01814 119 aa14.11□□□□□ -0.15
TRIM13-208ENST00000478111 PPIAL4FP0DN26 164 aa14.11□□□□□ -0.15
TRIM13-208ENST00000478111 SELENOWP63302 87 aa14.11□□□□□ -0.15
TRIM13-208ENST00000478111 SLC3A1Q07837 685 aa14.11□□□□□ -0.15
TRIM13-208ENST00000478111 ST3GAL3Q11203 375 aa14.11□□□□□ -0.15
TRIM13-208ENST00000478111 OR51A7Q8NH64 312 aa14.11□□□□□ -0.15
TRIM13-208ENST00000478111 FNDC8Q8TC99 324 aa14.11□□□□□ -0.15
TRIM13-208ENST00000478111 C22orf15Q8WYQ4 148 aa14.11□□□□□ -0.15
TRIM13-208ENST00000478111 C4orf45Q96LM5 186 aa14.11□□□□□ -0.15
TRIM13-208ENST00000478111 PRRC1Q96M27 445 aa14.11□□□□□ -0.15
TRIM13-208ENST00000478111 DIRC2Q96SL1 478 aa14.11□□□□□ -0.15
TRIM13-208ENST00000478111 POFUT1Q9H488 388 aa14.11□□□□□ -0.15
TRIM13-208ENST00000478111 UBAP1Q9NZ09 502 aa14.11□□□□□ -0.15
TRIM13-208ENST00000478111 CGGBP1Q9UFW8 167 aaPredicted RBP14.11□□□□□ -0.15
TRIM13-208ENST00000478111 SNX13Q9Y5W8 968 aa14.11□□□□□ -0.15
TRIM13-208ENST00000478111 NPTNQ9Y639 398 aa14.11□□□□□ -0.15
TRIM13-208ENST00000478111 TRAV27A0A087WT01 109 aa14.1□□□□□ -0.15
TRIM13-208ENST00000478111 ISPDA4D126 451 aa14.1□□□□□ -0.15
TRIM13-208ENST00000478111 MRASO14807 208 aa14.1□□□□□ -0.15
TRIM13-208ENST00000478111 FFAR1O14842 300 aa14.1□□□□□ -0.15
TRIM13-208ENST00000478111 PRSS23O95084 383 aa14.1□□□□□ -0.15
TRIM13-208ENST00000478111 PCBD1P61457 104 aa14.1□□□□□ -0.15
TRIM13-208ENST00000478111 PRKCDQ05655 676 aa14.1□□□□□ -0.15
TRIM13-208ENST00000478111 KLF10Q13118 480 aa14.1□□□□□ -0.15
TRIM13-208ENST00000478111 LRRC23Q53EV4 343 aaPredicted RBP14.1□□□□□ -0.15
TRIM13-208ENST00000478111 MTX3Q5HYI7 312 aa14.1□□□□□ -0.15
TRIM13-208ENST00000478111 Q6ZR03 302 aa14.1□□□□□ -0.15
TRIM13-208ENST00000478111 SYT9Q86SS6 491 aa14.1□□□□□ -0.15
TRIM13-208ENST00000478111 NRMQ8IXM6 262 aa14.1□□□□□ -0.15
TRIM13-208ENST00000478111 MICU2Q8IYU8 434 aa14.1□□□□□ -0.15
TRIM13-208ENST00000478111 BPIFB2Q8N4F0 458 aa14.1□□□□□ -0.15
TRIM13-208ENST00000478111 DEFB108BQ8NET1 73 aa14.1□□□□□ -0.15
TRIM13-208ENST00000478111 ZMYND19Q96E35 227 aaPredicted RBP14.1□□□□□ -0.15
TRIM13-208ENST00000478111 ELOVL3Q9HB03 270 aa14.1□□□□□ -0.15
TRIM13-208ENST00000478111 POLE4Q9NR33 117 aa14.1□□□□□ -0.15
TRIM13-208ENST00000478111 MMP26Q9NRE1 261 aa14.1□□□□□ -0.15
TRIM13-208ENST00000478111 TGP01266 2768 aa14.09□□□□□ -0.15
TRIM13-208ENST00000478111 A0A1W2PPL8 197 aa14.09□□□□□ -0.15
TRIM13-208ENST00000478111 FAM220BPB1ANY3 271 aa14.09□□□□□ -0.15
TRIM13-208ENST00000478111 H7C1C5 153 aa14.09□□□□□ -0.15
TRIM13-208ENST00000478111 J3KTA2 159 aa14.09□□□□□ -0.15
TRIM13-208ENST00000478111 ZNF26P17031 533 aaPredicted RBP14.09□□□□□ -0.15
TRIM13-208ENST00000478111 MSR1P21757 451 aa14.09□□□□□ -0.15
TRIM13-208ENST00000478111 YAP1P46937 504 aaKnown RBP14.09□□□□□ -0.15
TRIM13-208ENST00000478111 LCN6P62502 163 aa14.09□□□□□ -0.15
TRIM13-208ENST00000478111 UBA52P62987 128 aaKnown RBP14.09□□□□□ -0.15
TRIM13-208ENST00000478111 TNFAIP6P98066 277 aaPredicted RBP14.09□□□□□ -0.15
TRIM13-208ENST00000478111 AWAT1Q58HT5 328 aa14.09□□□□□ -0.15
TRIM13-208ENST00000478111 FAM205BPQ63HN1 556 aa14.09□□□□□ -0.15
TRIM13-208ENST00000478111 SGMS2Q8NHU3 365 aa14.09□□□□□ -0.15
TRIM13-208ENST00000478111 TPD52L3Q96J77 140 aa14.09□□□□□ -0.15
TRIM13-208ENST00000478111 DCLRE1CQ96SD1 692 aaKnown RBP14.09□□□□□ -0.15
TRIM13-208ENST00000478111 EMC7Q9NPA0 242 aa14.09□□□□□ -0.15
TRIM13-208ENST00000478111 SAR1AQ9NR31 198 aa14.09□□□□□ -0.15
TRIM13-208ENST00000478111 TBCCD1Q9NVR7 557 aa14.09□□□□□ -0.15
TRIM13-208ENST00000478111 GMPR2Q9P2T1 348 aaKnown RBP14.09□□□□□ -0.15
TRIM13-208ENST00000478111 RHCGQ9UBD6 479 aa14.09□□□□□ -0.15
TRIM13-208ENST00000478111 POLR3KQ9Y2Y1 108 aaPredicted RBP14.09□□□□□ -0.15
TRIM13-208ENST00000478111 LOC100653049A0A140TA62 436 aa14.08□□□□□ -0.16
TRIM13-208ENST00000478111 A6NIZ1 184 aa14.08□□□□□ -0.16
TRIM13-208ENST00000478111 BBIP1A8MTZ0 92 aa14.08□□□□□ -0.16
TRIM13-208ENST00000478111 TRAPPC2LH3BP13 241 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms