RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 RASD2Q96D21 266 aa18.63■□□□□ 0.57
COL9A3-211ENST00000477612 GPR160Q9UJ42 338 aa18.63■□□□□ 0.57
COL9A3-211ENST00000477612 C12orf71A8MTZ7 269 aa18.62■□□□□ 0.57
COL9A3-211ENST00000477612 IMPA2O14732 288 aa18.62■□□□□ 0.57
COL9A3-211ENST00000477612 IGHV3-13P01766 116 aa18.62■□□□□ 0.57
COL9A3-211ENST00000477612 CTLA4P16410 223 aa18.62■□□□□ 0.57
COL9A3-211ENST00000477612 CALB2P22676 271 aa18.62■□□□□ 0.57
COL9A3-211ENST00000477612 FPR3P25089 353 aa18.62■□□□□ 0.57
COL9A3-211ENST00000477612 WNT5AP41221 380 aa18.62■□□□□ 0.57
COL9A3-211ENST00000477612 GDI2P50395 445 aaKnown RBP18.62■□□□□ 0.57
COL9A3-211ENST00000477612 RPS6KA3P51812 740 aa18.62■□□□□ 0.57
COL9A3-211ENST00000477612 KLF3P57682 345 aaPredicted RBP18.62■□□□□ 0.57
COL9A3-211ENST00000477612 MAD2L1BPQ15013 274 aaPredicted RBP18.62■□□□□ 0.57
COL9A3-211ENST00000477612 CARTPTQ16568 116 aa18.62■□□□□ 0.57
COL9A3-211ENST00000477612 RFX4Q33E94 735 aa18.62■□□□□ 0.57
COL9A3-211ENST00000477612 MTX3Q5HYI7 312 aa18.62■□□□□ 0.57
COL9A3-211ENST00000477612 C1orf94Q6P1W5 598 aa18.62■□□□□ 0.57
COL9A3-211ENST00000477612 UNQ6126/PRO20091Q6UXV3 157 aa18.62■□□□□ 0.57
COL9A3-211ENST00000477612 ADCK1Q86TW2 530 aa18.62■□□□□ 0.57
COL9A3-211ENST00000477612 ZDHHC21Q8IVQ6 265 aa18.62■□□□□ 0.57
COL9A3-211ENST00000477612 CCDC197Q8NCU1 140 aa18.62■□□□□ 0.57
COL9A3-211ENST00000477612 OR1J1Q8NGS3 322 aa18.62■□□□□ 0.57
COL9A3-211ENST00000477612 SLCO1C1Q9NYB5 712 aa18.62■□□□□ 0.57
COL9A3-211ENST00000477612 FAM53CQ9NYF3 392 aa18.62■□□□□ 0.57
COL9A3-211ENST00000477612 TAAR3PQ9P1P4 343 aa18.62■□□□□ 0.57
COL9A3-211ENST00000477612 IER3IP1Q9Y5U9 82 aa18.62■□□□□ 0.57
COL9A3-211ENST00000477612 C5orf49A4QMS7 147 aa18.61■□□□□ 0.57
COL9A3-211ENST00000477612 ARPC3O15145 178 aa18.61■□□□□ 0.57
COL9A3-211ENST00000477612 LILRA1O75019 489 aa18.61■□□□□ 0.57
COL9A3-211ENST00000477612 T-ENOLP0DO92 83 aa18.61■□□□□ 0.57
COL9A3-211ENST00000477612 RRM2P31350 389 aa18.61■□□□□ 0.57
COL9A3-211ENST00000477612 MAGEA2P43356 314 aa18.61■□□□□ 0.57
COL9A3-211ENST00000477612 GSSP48637 474 aa18.61■□□□□ 0.57
COL9A3-211ENST00000477612 MRPS11P82912 194 aaKnown RBP18.61■□□□□ 0.57
COL9A3-211ENST00000477612 MOGQ16653 247 aa18.61■□□□□ 0.57
COL9A3-211ENST00000477612 UGT2A3Q6UWM9 527 aa18.61■□□□□ 0.57
COL9A3-211ENST00000477612 PTCHD4Q6ZW05 846 aa18.61■□□□□ 0.57
COL9A3-211ENST00000477612 ZNF101Q8IZC7 436 aa18.61■□□□□ 0.57
COL9A3-211ENST00000477612 SNX18Q96RF0 628 aa18.61■□□□□ 0.57
COL9A3-211ENST00000477612 SYT4Q9H2B2 425 aa18.61■□□□□ 0.57
COL9A3-211ENST00000477612 OR51B6Q9H340 312 aa18.61■□□□□ 0.57
COL9A3-211ENST00000477612 MUC13Q9H3R2 512 aa18.61■□□□□ 0.57
COL9A3-211ENST00000477612 NKIRAS2Q9NYR9 191 aa18.61■□□□□ 0.57
COL9A3-211ENST00000477612 EIF3KQ9UBQ5 218 aaKnown RBP18.61■□□□□ 0.57
COL9A3-211ENST00000477612 IL20RAQ9UHF4 553 aa18.61■□□□□ 0.57
COL9A3-211ENST00000477612 CUBNO60494 3623 aa18.61■□□□□ 0.57
COL9A3-211ENST00000477612 A0A1W2PPW3 197 aa18.6■□□□□ 0.57
COL9A3-211ENST00000477612 C17orf100A8MU93 164 aa18.6■□□□□ 0.57
COL9A3-211ENST00000477612 KHDRBS3O75525 346 aaKnown RBP18.6■□□□□ 0.57
COL9A3-211ENST00000477612 KRT36O76013 467 aa18.6■□□□□ 0.57
COL9A3-211ENST00000477612 HPXP02790 462 aa18.6■□□□□ 0.57
COL9A3-211ENST00000477612 NAT2P11245 290 aa18.6■□□□□ 0.57
COL9A3-211ENST00000477612 CCNOP22674 350 aa18.6■□□□□ 0.57
COL9A3-211ENST00000477612 IFNGR2P38484 337 aa18.6■□□□□ 0.57
COL9A3-211ENST00000477612 CDKN2AP42771 156 aaKnown RBP18.6■□□□□ 0.57
COL9A3-211ENST00000477612 LSM6P62312 80 aaKnown RBP18.6■□□□□ 0.57
COL9A3-211ENST00000477612 KCNMB1Q16558 191 aa18.6■□□□□ 0.57
COL9A3-211ENST00000477612 ZNF774Q6NX45 483 aa18.6■□□□□ 0.57
COL9A3-211ENST00000477612 RDH5Q92781 318 aa18.6■□□□□ 0.57
COL9A3-211ENST00000477612 MARS2Q96GW9 593 aaKnown RBP18.6■□□□□ 0.57
COL9A3-211ENST00000477612 C1orf21Q9H246 121 aa18.6■□□□□ 0.57
COL9A3-211ENST00000477612 OR52D1Q9H346 318 aa18.6■□□□□ 0.57
COL9A3-211ENST00000477612 CHODLQ9H9P2 273 aa18.6■□□□□ 0.57
COL9A3-211ENST00000477612 NDRG4Q9ULP0 352 aaKnown RBP18.6■□□□□ 0.57
COL9A3-211ENST00000477612 SVEP1Q4LDE5 3571 aa18.59■□□□□ 0.57
COL9A3-211ENST00000477612 TCRBV5S2A0A599 114 aa18.59■□□□□ 0.57
COL9A3-211ENST00000477612 LYNX1G3V0Z9 82 aa18.59■□□□□ 0.57
COL9A3-211ENST00000477612 H3BSA7 217 aa18.59■□□□□ 0.57
COL9A3-211ENST00000477612 SOCS2O14508 198 aa18.59■□□□□ 0.57
COL9A3-211ENST00000477612 OR10H3O60404 316 aa18.59■□□□□ 0.57
COL9A3-211ENST00000477612 SLC16A7O60669 478 aa18.59■□□□□ 0.57
COL9A3-211ENST00000477612 LYNX1P0DP58 116 aa18.59■□□□□ 0.57
COL9A3-211ENST00000477612 ATP6V1B2P21281 511 aa18.59■□□□□ 0.57
COL9A3-211ENST00000477612 ACHEP22303 614 aa18.59■□□□□ 0.57
COL9A3-211ENST00000477612 COL8A2P25067 703 aa18.59■□□□□ 0.57
COL9A3-211ENST00000477612 SCRN3Q0VDG4 424 aa18.59■□□□□ 0.57
COL9A3-211ENST00000477612 TRIM25Q14258 630 aaKnown RBP18.59■□□□□ 0.57
COL9A3-211ENST00000477612 NKPD1Q17RQ9 610 aa18.59■□□□□ 0.57
COL9A3-211ENST00000477612 ZNF718Q3SXZ3 478 aa18.59■□□□□ 0.57
COL9A3-211ENST00000477612 MBNL2Q5VZF2 373 aaKnown RBP18.59■□□□□ 0.57
COL9A3-211ENST00000477612 LCN8Q6JVE9 175 aa18.59■□□□□ 0.57
COL9A3-211ENST00000477612 GLB1L2Q8IW92 636 aa18.59■□□□□ 0.57
COL9A3-211ENST00000477612 GNPDA2Q8TDQ7 276 aa18.59■□□□□ 0.57
COL9A3-211ENST00000477612 MSI2Q96DH6 328 aaKnown RBP18.59■□□□□ 0.57
COL9A3-211ENST00000477612 NUAK2Q9H093 628 aa18.59■□□□□ 0.57
COL9A3-211ENST00000477612 EMC7Q9NPA0 242 aa18.59■□□□□ 0.57
COL9A3-211ENST00000477612 HINT3Q9NQE9 182 aaKnown RBP18.59■□□□□ 0.57
COL9A3-211ENST00000477612 TMCC3Q9ULS5 477 aa18.59■□□□□ 0.57
COL9A3-211ENST00000477612 COA3Q9Y2R0 106 aaPredicted RBP18.59■□□□□ 0.57
COL9A3-211ENST00000477612 SLC6A6P31641 620 aa18.58■□□□□ 0.56
COL9A3-211ENST00000477612 CHN2P52757 468 aa18.58■□□□□ 0.56
COL9A3-211ENST00000477612 TSPAN31Q12999 210 aa18.58■□□□□ 0.56
COL9A3-211ENST00000477612 AQP6Q13520 282 aa18.58■□□□□ 0.56
COL9A3-211ENST00000477612 PCGF3Q3KNV8 242 aa18.58■□□□□ 0.56
COL9A3-211ENST00000477612 CYP2R1Q6VVX0 501 aa18.58■□□□□ 0.56
COL9A3-211ENST00000477612 RINLQ6ZS11 566 aa18.58■□□□□ 0.56
COL9A3-211ENST00000477612 LINC00471Q8N535 108 aa18.58■□□□□ 0.56
COL9A3-211ENST00000477612 SLC25A40Q8TBP6 338 aa18.58■□□□□ 0.56
COL9A3-211ENST00000477612 HPS1Q92902 700 aa18.58■□□□□ 0.56
COL9A3-211ENST00000477612 POP5Q969H6 163 aaKnown RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms