RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 ANKUB1A6NFN9 424 aa13.25□□□□□ -0.29
HDAC6-220ENST00000477528 PRICKLE3O43900 615 aaPredicted RBP13.25□□□□□ -0.29
HDAC6-220ENST00000477528 GAAP10253 952 aa13.25□□□□□ -0.29
HDAC6-220ENST00000477528 MFAP5Q13361 173 aa13.25□□□□□ -0.29
HDAC6-220ENST00000477528 AAED1Q7RTV5 226 aa13.25□□□□□ -0.29
HDAC6-220ENST00000477528 TOMM40LQ969M1 308 aa13.25□□□□□ -0.29
HDAC6-220ENST00000477528 TMEM184BQ9Y519 407 aaPredicted RBP13.25□□□□□ -0.29
HDAC6-220ENST00000477528 ALG1L2C9J202 215 aa13.25□□□□□ -0.29
HDAC6-220ENST00000477528 DVL2O14641 736 aa13.25□□□□□ -0.29
HDAC6-220ENST00000477528 SNU13P55769 128 aaKnown RBP13.25□□□□□ -0.29
HDAC6-220ENST00000477528 NXPH1P58417 271 aa13.25□□□□□ -0.29
HDAC6-220ENST00000477528 RPS19BP1Q86WX3 136 aaKnown RBP13.25□□□□□ -0.29
HDAC6-220ENST00000477528 GJC3Q8NFK1 279 aa13.25□□□□□ -0.29
HDAC6-220ENST00000477528 C8orf44Q96CB5 159 aa13.25□□□□□ -0.29
HDAC6-220ENST00000477528 MOB1AQ9H8S9 216 aa13.25□□□□□ -0.29
HDAC6-220ENST00000477528 PILRAQ9UKJ1 303 aa13.25□□□□□ -0.29
HDAC6-220ENST00000477528 TSC2P49815 1807 aa13.25□□□□□ -0.29
HDAC6-220ENST00000477528 C4orf51C9J302 202 aa13.25□□□□□ -0.29
HDAC6-220ENST00000477528 ZFPL1O95159 310 aa13.25□□□□□ -0.29
HDAC6-220ENST00000477528 CHRM2P08172 466 aa13.25□□□□□ -0.29
HDAC6-220ENST00000477528 GALNSP34059 522 aa13.25□□□□□ -0.29
HDAC6-220ENST00000477528 BPHLQ86WA6 291 aaPredicted RBP13.25□□□□□ -0.29
HDAC6-220ENST00000477528 IQCF2Q8IXL9 164 aa13.25□□□□□ -0.29
HDAC6-220ENST00000477528 TEX19Q8NA77 164 aa13.25□□□□□ -0.29
HDAC6-220ENST00000477528 TSNAXQ99598 290 aaKnown RBP13.25□□□□□ -0.29
HDAC6-220ENST00000477528 MED29Q9NX70 200 aa13.25□□□□□ -0.29
HDAC6-220ENST00000477528 A0A0D9SG52 128 aa13.25□□□□□ -0.29
HDAC6-220ENST00000477528 GIPP09681 153 aaPredicted RBP13.25□□□□□ -0.29
HDAC6-220ENST00000477528 UBBP0CG47 229 aa13.25□□□□□ -0.29
HDAC6-220ENST00000477528 FCGR2AP12318 317 aa13.25□□□□□ -0.29
HDAC6-220ENST00000477528 CDKN2AP42771 156 aaKnown RBP13.25□□□□□ -0.29
HDAC6-220ENST00000477528 C2orf76Q3KRA6 126 aa13.25□□□□□ -0.29
HDAC6-220ENST00000477528 SLC36A2Q495M3 483 aa13.25□□□□□ -0.29
HDAC6-220ENST00000477528 ELP2Q6IA86 826 aa13.25□□□□□ -0.29
HDAC6-220ENST00000477528 CBLN3Q6UW01 205 aa13.25□□□□□ -0.29
HDAC6-220ENST00000477528 RFPL4BQ6ZWI9 263 aa13.25□□□□□ -0.29
HDAC6-220ENST00000477528 MRPL21Q7Z2W9 205 aaKnown RBP13.25□□□□□ -0.29
HDAC6-220ENST00000477528 TSEN54Q7Z6J9 526 aaKnown RBP13.25□□□□□ -0.29
HDAC6-220ENST00000477528 ANGPTL5Q86XS5 388 aa13.25□□□□□ -0.29
HDAC6-220ENST00000477528 CCDC71LQ8N9Z2 235 aa13.25□□□□□ -0.29
HDAC6-220ENST00000477528 OR5M1Q8NGP8 315 aa13.25□□□□□ -0.29
HDAC6-220ENST00000477528 ABHD6Q9BV23 337 aa13.25□□□□□ -0.29
HDAC6-220ENST00000477528 ZNF700Q9H0M5 742 aa13.25□□□□□ -0.29
HDAC6-220ENST00000477528 URB1O60287 2271 aaKnown RBP13.25□□□□□ -0.29
HDAC6-220ENST00000477528 CENPVL1A0A0U1RR11 272 aa13.24□□□□□ -0.29
HDAC6-220ENST00000477528 TMEM221A6NGB7 291 aa13.24□□□□□ -0.29
HDAC6-220ENST00000477528 VAMP5O95183 116 aa13.24□□□□□ -0.29
HDAC6-220ENST00000477528 LAP3P28838 519 aa13.24□□□□□ -0.29
HDAC6-220ENST00000477528 ATP1B3P54709 279 aa13.24□□□□□ -0.29
HDAC6-220ENST00000477528 FUT7Q11130 342 aa13.24□□□□□ -0.29
HDAC6-220ENST00000477528 CORO6Q6QEF8 472 aa13.24□□□□□ -0.29
HDAC6-220ENST00000477528 SLC16A14Q7RTX9 510 aa13.24□□□□□ -0.29
HDAC6-220ENST00000477528 SMRP1Q8NCR6 262 aa13.24□□□□□ -0.29
HDAC6-220ENST00000477528 NANOS1Q8WY41 292 aaKnown RBP13.24□□□□□ -0.29
HDAC6-220ENST00000477528 RADILQ96JH8 1075 aa13.24□□□□□ -0.29
HDAC6-220ENST00000477528 ENKD1Q9H0I2 346 aa13.24□□□□□ -0.29
HDAC6-220ENST00000477528 METTL9Q9H1A3 318 aa13.24□□□□□ -0.29
HDAC6-220ENST00000477528 EHFQ9NZC4 300 aa13.24□□□□□ -0.29
HDAC6-220ENST00000477528 PADI1Q9ULC6 663 aa13.24□□□□□ -0.29
HDAC6-220ENST00000477528 UBE2J1Q9Y385 318 aaPredicted RBP13.24□□□□□ -0.29
HDAC6-220ENST00000477528 CIB4A0PJX0 185 aa13.24□□□□□ -0.29
HDAC6-220ENST00000477528 MYF5P13349 255 aa13.24□□□□□ -0.29
HDAC6-220ENST00000477528 TMPPEQ6ZT21 453 aa13.24□□□□□ -0.29
HDAC6-220ENST00000477528 SSX6Q7RTT6 188 aa13.24□□□□□ -0.29
HDAC6-220ENST00000477528 OR1M1Q8NGA1 313 aa13.24□□□□□ -0.29
HDAC6-220ENST00000477528 IFI44Q8TCB0 444 aa13.24□□□□□ -0.29
HDAC6-220ENST00000477528 ZNF775Q96BV0 537 aaPredicted RBP13.24□□□□□ -0.29
HDAC6-220ENST00000477528 CDCP1Q9H5V8 836 aa13.24□□□□□ -0.29
HDAC6-220ENST00000477528 ICAM5Q9UMF0 924 aa13.24□□□□□ -0.29
HDAC6-220ENST00000477528 PLXNA3P51805 1871 aa13.24□□□□□ -0.29
HDAC6-220ENST00000477528 CRYZL1O95825 349 aa13.24□□□□□ -0.29
HDAC6-220ENST00000477528 IGHV4-34P06331 123 aa13.24□□□□□ -0.29
HDAC6-220ENST00000477528 FOLR1P15328 257 aa13.24□□□□□ -0.29
HDAC6-220ENST00000477528 PRKACBP22694 351 aa13.24□□□□□ -0.29
HDAC6-220ENST00000477528 RPS27AP62979 156 aaKnown RBP13.24□□□□□ -0.29
HDAC6-220ENST00000477528 UBA52P62987 128 aaKnown RBP13.24□□□□□ -0.29
HDAC6-220ENST00000477528 RNF32Q9H0A6 362 aa13.24□□□□□ -0.29
HDAC6-220ENST00000477528 VWA8A3KMH1 1905 aa13.24□□□□□ -0.29
HDAC6-220ENST00000477528 A0A1B0GUH1 482 aa13.24□□□□□ -0.29
HDAC6-220ENST00000477528 MBTPS2O43462 519 aa13.24□□□□□ -0.29
HDAC6-220ENST00000477528 ENPP1P22413 925 aa13.24□□□□□ -0.29
HDAC6-220ENST00000477528 HTR5AP47898 357 aa13.24□□□□□ -0.29
HDAC6-220ENST00000477528 GLIPR1L1Q6UWM5 242 aa13.24□□□□□ -0.29
HDAC6-220ENST00000477528 DND1Q8IYX4 353 aaKnown RBP13.24□□□□□ -0.29
HDAC6-220ENST00000477528 ATOH1Q92858 354 aaPredicted RBP13.24□□□□□ -0.29
HDAC6-220ENST00000477528 SCARF2Q96GP6 870 aaPredicted RBP13.24□□□□□ -0.29
HDAC6-220ENST00000477528 DCLRE1CQ96SD1 692 aaKnown RBP13.24□□□□□ -0.29
HDAC6-220ENST00000477528 DDOQ99489 341 aa13.24□□□□□ -0.29
HDAC6-220ENST00000477528 PCM1Q15154 2024 aa13.24□□□□□ -0.29
HDAC6-220ENST00000477528 A6NL46 340 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 HYAL3O43820 417 aaPredicted RBP13.23□□□□□ -0.29
HDAC6-220ENST00000477528 LALBAP00709 142 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 MTCP1P56278 107 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 PER3P56645 1201 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 FXYD4P59646 89 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 NPSR1Q6W5P4 371 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 DOK3Q7L591 496 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 SULF2Q8IWU5 870 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 TSPAN32Q96QS1 320 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 PRSS27Q9BQR3 290 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms