RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 UBTD1Q9HAC8 227 aa11.4□□□□□ -0.58
TOP3A-205ENST00000477508 C8orf4Q9NR00 106 aa11.4□□□□□ -0.58
TOP3A-205ENST00000477508 CISD1Q9NZ45 108 aaKnown RBP11.4□□□□□ -0.58
TOP3A-205ENST00000477508 MOKQ9UQ07 419 aa11.4□□□□□ -0.58
TOP3A-205ENST00000477508 HRNRQ86YZ3 2850 aaPredicted RBP11.4□□□□□ -0.58
TOP3A-205ENST00000477508 ZAR1LA6NP61 321 aa11.39□□□□□ -0.59
TOP3A-205ENST00000477508 ANKRD65E5RJM6 399 aa11.39□□□□□ -0.59
TOP3A-205ENST00000477508 PRR23D1E9PI22 279 aaPredicted RBP11.39□□□□□ -0.59
TOP3A-205ENST00000477508 ANKRD17O75179 2603 aaKnown RBP11.39□□□□□ -0.59
TOP3A-205ENST00000477508 HLA-DQA2P01906 255 aa11.39□□□□□ -0.59
TOP3A-205ENST00000477508 RAF1P04049 648 aa11.39□□□□□ -0.59
TOP3A-205ENST00000477508 PRR23D2P0DMB1 279 aaPredicted RBP11.39□□□□□ -0.59
TOP3A-205ENST00000477508 GAAP10253 952 aa11.39□□□□□ -0.59
TOP3A-205ENST00000477508 COX5BP10606 129 aa11.39□□□□□ -0.59
TOP3A-205ENST00000477508 ZNF823P16415 610 aa11.39□□□□□ -0.59
TOP3A-205ENST00000477508 DNASE1P24855 282 aa11.39□□□□□ -0.59
TOP3A-205ENST00000477508 FMO3P31513 532 aa11.39□□□□□ -0.59
TOP3A-205ENST00000477508 APLNRP35414 380 aa11.39□□□□□ -0.59
TOP3A-205ENST00000477508 TEKQ02763 1124 aa11.39□□□□□ -0.59
TOP3A-205ENST00000477508 RAB39AQ14964 217 aa11.39□□□□□ -0.59
TOP3A-205ENST00000477508 SNAPC1Q16533 368 aa11.39□□□□□ -0.59
TOP3A-205ENST00000477508 TBC1D28Q2M2D7 210 aa11.39□□□□□ -0.59
TOP3A-205ENST00000477508 PABPC1L2AQ5JQF8 200 aa11.39□□□□□ -0.59
TOP3A-205ENST00000477508 ZNF544Q6NX49 715 aa11.39□□□□□ -0.59
TOP3A-205ENST00000477508 PAMR1Q6UXH9 720 aa11.39□□□□□ -0.59
TOP3A-205ENST00000477508 UNQ6126/PRO20091Q6UXV3 157 aa11.39□□□□□ -0.59
TOP3A-205ENST00000477508 ZBTB49Q6ZSB9 765 aa11.39□□□□□ -0.59
TOP3A-205ENST00000477508 CDH24Q86UP0 819 aa11.39□□□□□ -0.59
TOP3A-205ENST00000477508 LURAP1LQ8IV03 231 aa11.39□□□□□ -0.59
TOP3A-205ENST00000477508 SLC30A7Q8NEW0 376 aa11.39□□□□□ -0.59
TOP3A-205ENST00000477508 GJC3Q8NFK1 279 aa11.39□□□□□ -0.59
TOP3A-205ENST00000477508 HTRA1Q92743 480 aa11.39□□□□□ -0.59
TOP3A-205ENST00000477508 PIGTQ969N2 578 aa11.39□□□□□ -0.59
TOP3A-205ENST00000477508 CDADC1Q9BWV3 514 aa11.39□□□□□ -0.59
TOP3A-205ENST00000477508 GABARAPL3Q9BY60 117 aa11.39□□□□□ -0.59
TOP3A-205ENST00000477508 OR2H1Q9GZK4 316 aa11.39□□□□□ -0.59
TOP3A-205ENST00000477508 NOX3Q9HBY0 568 aa11.39□□□□□ -0.59
TOP3A-205ENST00000477508 EMC7Q9NPA0 242 aa11.39□□□□□ -0.59
TOP3A-205ENST00000477508 ST6GALNAC2Q9UJ37 374 aa11.39□□□□□ -0.59
TOP3A-205ENST00000477508 POLR1DQ9Y2S0 133 aa11.39□□□□□ -0.59
TOP3A-205ENST00000477508 ATP23Q9Y6H3 246 aa11.39□□□□□ -0.59
TOP3A-205ENST00000477508 IGHV2OR16-5A0A0B4J2B6 119 aa11.38□□□□□ -0.59
TOP3A-205ENST00000477508 EI24O14681 340 aa11.38□□□□□ -0.59
TOP3A-205ENST00000477508 PRODHO43272 600 aa11.38□□□□□ -0.59
TOP3A-205ENST00000477508 MITFO75030 526 aaPredicted RBP11.38□□□□□ -0.59
TOP3A-205ENST00000477508 SNAP29O95721 258 aa11.38□□□□□ -0.59
TOP3A-205ENST00000477508 CELA3BP08861 270 aa11.38□□□□□ -0.59
TOP3A-205ENST00000477508 ZNF35P13682 527 aa11.38□□□□□ -0.59
TOP3A-205ENST00000477508 ANPEPP15144 967 aa11.38□□□□□ -0.59
TOP3A-205ENST00000477508 SPI1P17947 270 aa11.38□□□□□ -0.59
TOP3A-205ENST00000477508 PSG4Q00888 419 aa11.38□□□□□ -0.59
TOP3A-205ENST00000477508 GALK2Q01415 458 aa11.38□□□□□ -0.59
TOP3A-205ENST00000477508 KEAP1Q14145 624 aa11.38□□□□□ -0.59
TOP3A-205ENST00000477508 RCN1Q15293 331 aa11.38□□□□□ -0.59
TOP3A-205ENST00000477508 TUSC1Q2TAM9 212 aa11.38□□□□□ -0.59
TOP3A-205ENST00000477508 SLX4IPQ5VYV7 408 aa11.38□□□□□ -0.59
TOP3A-205ENST00000477508 TMEM236Q5W0B7 351 aa11.38□□□□□ -0.59
TOP3A-205ENST00000477508 UGT2A3Q6UWM9 527 aa11.38□□□□□ -0.59
TOP3A-205ENST00000477508 ZNF584Q8IVC4 421 aa11.38□□□□□ -0.59
TOP3A-205ENST00000477508 C1orf174Q8IYL3 243 aa11.38□□□□□ -0.59
TOP3A-205ENST00000477508 CBR4Q8N4T8 237 aa11.38□□□□□ -0.59
TOP3A-205ENST00000477508 NUP37Q8NFH4 326 aa11.38□□□□□ -0.59
TOP3A-205ENST00000477508 OR9Q1Q8NGQ5 310 aa11.38□□□□□ -0.59
TOP3A-205ENST00000477508 LILRB1Q8NHL6 650 aaPredicted RBP11.38□□□□□ -0.59
TOP3A-205ENST00000477508 SMAP2Q8WU79 429 aaPredicted RBP11.38□□□□□ -0.59
TOP3A-205ENST00000477508 IPCEF1Q8WWN9 437 aaPredicted RBP11.38□□□□□ -0.59
TOP3A-205ENST00000477508 OTULINQ96BN8 352 aa11.38□□□□□ -0.59
TOP3A-205ENST00000477508 DHRS9Q9BPW9 319 aa11.38□□□□□ -0.59
TOP3A-205ENST00000477508 GRIP2Q9C0E4 1043 aa11.38□□□□□ -0.59
TOP3A-205ENST00000477508 DCLRE1BQ9H816 532 aa11.38□□□□□ -0.59
TOP3A-205ENST00000477508 CDH20Q9HBT6 801 aa11.38□□□□□ -0.59
TOP3A-205ENST00000477508 TVP23BQ9NYZ1 205 aa11.38□□□□□ -0.59
TOP3A-205ENST00000477508 ASH2LQ9UBL3 628 aa11.38□□□□□ -0.59
TOP3A-205ENST00000477508 ATPIF1Q9UII2 106 aa11.38□□□□□ -0.59
TOP3A-205ENST00000477508 NDRG4Q9ULP0 352 aaKnown RBP11.38□□□□□ -0.59
TOP3A-205ENST00000477508 POLQO75417 2590 aa11.38□□□□□ -0.59
TOP3A-205ENST00000477508 LRBAP50851 2863 aa11.38□□□□□ -0.59
TOP3A-205ENST00000477508 DSCAMO60469 2012 aa11.37□□□□□ -0.59
TOP3A-205ENST00000477508 E7EQL1 145 aa11.37□□□□□ -0.59
TOP3A-205ENST00000477508 ATP6V1G2-DDX39BF2Z307 99 aa11.37□□□□□ -0.59
TOP3A-205ENST00000477508 SGCEO43556 437 aa11.37□□□□□ -0.59
TOP3A-205ENST00000477508 GLCEO94923 617 aa11.37□□□□□ -0.59
TOP3A-205ENST00000477508 MPZL1O95297 269 aa11.37□□□□□ -0.59
TOP3A-205ENST00000477508 TFP02787 698 aa11.37□□□□□ -0.59
TOP3A-205ENST00000477508 SCG5P05408 212 aa11.37□□□□□ -0.59
TOP3A-205ENST00000477508 BMP4P12644 408 aa11.37□□□□□ -0.59
TOP3A-205ENST00000477508 STOMP27105 288 aa11.37□□□□□ -0.59
TOP3A-205ENST00000477508 PCSK6P29122 969 aa11.37□□□□□ -0.59
TOP3A-205ENST00000477508 APOBEC3AP31941 199 aaPredicted RBP11.37□□□□□ -0.59
TOP3A-205ENST00000477508 PYCR1P32322 319 aa11.37□□□□□ -0.59
TOP3A-205ENST00000477508 GDI2P50395 445 aaKnown RBP11.37□□□□□ -0.59
TOP3A-205ENST00000477508 RPS23P62266 143 aaKnown RBP11.37□□□□□ -0.59
TOP3A-205ENST00000477508 SPOCK1Q08629 439 aa11.37□□□□□ -0.59
TOP3A-205ENST00000477508 TEX30Q5JUR7 227 aa11.37□□□□□ -0.59
TOP3A-205ENST00000477508 SLC35D3Q5M8T2 416 aa11.37□□□□□ -0.59
TOP3A-205ENST00000477508 AGAP6Q5VW22 663 aa11.37□□□□□ -0.59
TOP3A-205ENST00000477508 C12orf73Q69YU5 71 aa11.37□□□□□ -0.59
TOP3A-205ENST00000477508 PLBD1Q6P4A8 553 aa11.37□□□□□ -0.59
TOP3A-205ENST00000477508 ARL9Q6T311 187 aa11.37□□□□□ -0.59
TOP3A-205ENST00000477508 CPOQ8IVL8 374 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms