RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 MT-ATP6P00846 226 aa17.01■□□□□ 0.31
VARS2-209ENST00000477288 NPPBP16860 134 aa17.01■□□□□ 0.31
VARS2-209ENST00000477288 CISD2Q8N5K1 135 aaKnown RBP17.01■□□□□ 0.31
VARS2-209ENST00000477288 KDF1Q8NAX2 398 aaPredicted RBP17.01■□□□□ 0.31
VARS2-209ENST00000477288 PINX1Q96BK5 328 aaKnown RBP17.01■□□□□ 0.31
VARS2-209ENST00000477288 PSD2Q9BQI7 771 aa17.01■□□□□ 0.31
VARS2-209ENST00000477288 GON7Q9BXV9 100 aa17.01■□□□□ 0.31
VARS2-209ENST00000477288 LYRM4Q9HD34 91 aa17.01■□□□□ 0.31
VARS2-209ENST00000477288 EMC7Q9NPA0 242 aa17.01■□□□□ 0.31
VARS2-209ENST00000477288 MED9Q9NWA0 146 aa17.01■□□□□ 0.31
VARS2-209ENST00000477288 STMND1H3BQB6 276 aa17.01■□□□□ 0.31
VARS2-209ENST00000477288 SRMP19623 302 aa17.01■□□□□ 0.31
VARS2-209ENST00000477288 APEX1P27695 318 aaKnown RBP17.01■□□□□ 0.31
VARS2-209ENST00000477288 DUSP2Q05923 314 aa17.01■□□□□ 0.31
VARS2-209ENST00000477288 TMEM182Q6ZP80 229 aaPredicted RBP17.01■□□□□ 0.31
VARS2-209ENST00000477288 PRSS45Q7RTY3 260 aa17.01■□□□□ 0.31
VARS2-209ENST00000477288 OR10G3Q8NGC4 313 aa17.01■□□□□ 0.31
VARS2-209ENST00000477288 SLC25A43Q8WUT9 341 aaPredicted RBP17.01■□□□□ 0.31
VARS2-209ENST00000477288 PSORS1C1Q9UIG5 152 aa17.01■□□□□ 0.31
VARS2-209ENST00000477288 KLF13Q9Y2Y9 288 aaPredicted RBP17.01■□□□□ 0.31
VARS2-209ENST00000477288 SIRPB1O00241 398 aa17.01■□□□□ 0.31
VARS2-209ENST00000477288 FOXC1Q12948 553 aa17.01■□□□□ 0.31
VARS2-209ENST00000477288 KCTD11Q693B1 232 aa17.01■□□□□ 0.31
VARS2-209ENST00000477288 OR10R2Q8NGX6 335 aa17.01■□□□□ 0.31
VARS2-209ENST00000477288 CSF3RQ99062 836 aa17.01■□□□□ 0.31
VARS2-209ENST00000477288 ETV7Q9Y603 341 aa17.01■□□□□ 0.31
VARS2-209ENST00000477288 TCRBP04435 133 aa17.01■□□□□ 0.31
VARS2-209ENST00000477288 ZNF77Q15935 545 aa17.01■□□□□ 0.31
VARS2-209ENST00000477288 DUSP6Q16828 381 aa17.01■□□□□ 0.31
VARS2-209ENST00000477288 OR5H6Q8NGV6 325 aa17.01■□□□□ 0.31
VARS2-209ENST00000477288 SEC22CQ9BRL7 303 aa17.01■□□□□ 0.31
VARS2-209ENST00000477288 OR51B4Q9Y5P0 310 aa17.01■□□□□ 0.31
VARS2-209ENST00000477288 CITO14578 2027 aa17.01■□□□□ 0.31
VARS2-209ENST00000477288 TMEM202A6NGA9 273 aa17.01■□□□□ 0.31
VARS2-209ENST00000477288 ANGPTL7O43827 346 aa17.01■□□□□ 0.31
VARS2-209ENST00000477288 EIF4E2O60573 245 aaKnown RBP17.01■□□□□ 0.31
VARS2-209ENST00000477288 TRIM23P36406 574 aa17.01■□□□□ 0.31
VARS2-209ENST00000477288 NTNG1Q9Y2I2 539 aa17.01■□□□□ 0.31
VARS2-209ENST00000477288 TNFRSF10CO14798 259 aa17■□□□□ 0.31
VARS2-209ENST00000477288 CT45A10P0DMU9 189 aa17■□□□□ 0.31
VARS2-209ENST00000477288 HOXD12P35452 270 aa17■□□□□ 0.31
VARS2-209ENST00000477288 RPL27P61353 136 aaKnown RBP17■□□□□ 0.31
VARS2-209ENST00000477288 SPRED3Q2MJR0 410 aa17■□□□□ 0.31
VARS2-209ENST00000477288 NKAIN3Q8N8D7 197 aa17■□□□□ 0.31
VARS2-209ENST00000477288 NIPSNAP1Q9BPW8 284 aa17■□□□□ 0.31
VARS2-209ENST00000477288 MYH7P12883 1935 aa17■□□□□ 0.31
VARS2-209ENST00000477288 UBL3O95164 117 aa17■□□□□ 0.31
VARS2-209ENST00000477288 SRP9P49458 86 aaKnown RBP17■□□□□ 0.31
VARS2-209ENST00000477288 NHSL2Q5HYW2 709 aa17■□□□□ 0.31
VARS2-209ENST00000477288 CGB2Q6NT52 195 aa17■□□□□ 0.31
VARS2-209ENST00000477288 PATE1Q8WXA2 126 aa17■□□□□ 0.31
VARS2-209ENST00000477288 OR5M11Q96RB7 305 aa17■□□□□ 0.31
VARS2-209ENST00000477288 NDRG4Q9ULP0 352 aaKnown RBP17■□□□□ 0.31
VARS2-209ENST00000477288 AQP7P3A6NL99 342 aa17■□□□□ 0.31
VARS2-209ENST00000477288 GLCEO94923 617 aa17■□□□□ 0.31
VARS2-209ENST00000477288 A0A1B0GVG6 124 aa17■□□□□ 0.31
VARS2-209ENST00000477288 SH2D7A6NKC9 451 aaPredicted RBP17■□□□□ 0.31
VARS2-209ENST00000477288 CLEC2LP0C7M8 214 aa17■□□□□ 0.31
VARS2-209ENST00000477288 TRMT12Q53H54 448 aaKnown RBP17■□□□□ 0.31
VARS2-209ENST00000477288 VWA2Q5GFL6 755 aa17■□□□□ 0.31
VARS2-209ENST00000477288 METRNLQ641Q3 311 aa17■□□□□ 0.31
VARS2-209ENST00000477288 RPL7L1Q6DKI1 246 aaKnown RBP17■□□□□ 0.31
VARS2-209ENST00000477288 BTF3L4Q96K17 158 aa17■□□□□ 0.31
VARS2-209ENST00000477288 EDEM2Q9BV94 578 aa17■□□□□ 0.31
VARS2-209ENST00000477288 CHST11Q9NPF2 352 aa17■□□□□ 0.31
VARS2-209ENST00000477288 NDRG3Q9UGV2 375 aa17■□□□□ 0.31
VARS2-209ENST00000477288 EXO1Q9UQ84 846 aaKnown RBP17■□□□□ 0.31
VARS2-209ENST00000477288 SYT5O00445 386 aa17■□□□□ 0.31
VARS2-209ENST00000477288 FCN2Q15485 313 aa17■□□□□ 0.31
VARS2-209ENST00000477288 MBOAT4Q96T53 435 aa17■□□□□ 0.31
VARS2-209ENST00000477288 STACQ99469 402 aa17■□□□□ 0.31
VARS2-209ENST00000477288 DIMT1Q9UNQ2 313 aaKnown RBP17■□□□□ 0.31
VARS2-209ENST00000477288 PYCR3Q53H96 274 aa16.99■□□□□ 0.31
VARS2-209ENST00000477288 AVPI1Q5T686 147 aa16.99■□□□□ 0.31
VARS2-209ENST00000477288 Q96M85 177 aa16.99■□□□□ 0.31
VARS2-209ENST00000477288 TGIF2Q9GZN2 237 aa16.99■□□□□ 0.31
VARS2-209ENST00000477288 PMS2P1A4D2B8 440 aa16.99■□□□□ 0.31
VARS2-209ENST00000477288 IDSB3KWA1 339 aa16.99■□□□□ 0.31
VARS2-209ENST00000477288 M0R082 166 aa16.99■□□□□ 0.31
VARS2-209ENST00000477288 CHEK1O14757 476 aa16.99■□□□□ 0.31
VARS2-209ENST00000477288 DFFBO76075 338 aa16.99■□□□□ 0.31
VARS2-209ENST00000477288 FPR3P25089 353 aa16.99■□□□□ 0.31
VARS2-209ENST00000477288 TMEM240Q5SV17 173 aa16.99■□□□□ 0.31
VARS2-209ENST00000477288 ANKRD16Q6P6B7 361 aa16.99■□□□□ 0.31
VARS2-209ENST00000477288 FAM103A1Q9BTL3 118 aaKnown RBP16.99■□□□□ 0.31
VARS2-209ENST00000477288 RAB19A4D1S5 217 aa16.99■□□□□ 0.31
VARS2-209ENST00000477288 OR5G3P0C626 314 aa16.99■□□□□ 0.31
VARS2-209ENST00000477288 ECI1P42126 302 aa16.99■□□□□ 0.31
VARS2-209ENST00000477288 ZMAT1Q5H9K5 638 aa16.99■□□□□ 0.31
VARS2-209ENST00000477288 OR6M1Q8NGM8 313 aa16.99■□□□□ 0.31
VARS2-209ENST00000477288 TAF9BQ9HBM6 251 aa16.99■□□□□ 0.31
VARS2-209ENST00000477288 CHRNA9Q9UGM1 479 aa16.99■□□□□ 0.31
VARS2-209ENST00000477288 RNF150Q9ULK6 438 aa16.99■□□□□ 0.31
VARS2-209ENST00000477288 A0A096LPE4 126 aa16.99■□□□□ 0.31
VARS2-209ENST00000477288 A0A1W2PPZ6 126 aa16.99■□□□□ 0.31
VARS2-209ENST00000477288 HOXC11O43248 304 aaPredicted RBP16.99■□□□□ 0.31
VARS2-209ENST00000477288 HSF1Q00613 529 aa16.99■□□□□ 0.31
VARS2-209ENST00000477288 SMAD4Q13485 552 aaKnown RBP16.99■□□□□ 0.31
VARS2-209ENST00000477288 TMEM200AQ86VY9 491 aa16.99■□□□□ 0.31
VARS2-209ENST00000477288 OR5B3Q8NH48 314 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms