RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 TIMM10BQ9Y5J6 103 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 TRAV20A0A0B4J274 112 aa5.94□□□□□ -1.46
HDAC3-207ENST00000475549 BBIP1A8MTZ0 92 aa5.94□□□□□ -1.46
HDAC3-207ENST00000475549 NME4O00746 187 aa5.94□□□□□ -1.46
HDAC3-207ENST00000475549 IFNA14P01570 189 aa5.94□□□□□ -1.46
HDAC3-207ENST00000475549 DRD4P21917 467 aa5.94□□□□□ -1.46
HDAC3-207ENST00000475549 CFPP27918 469 aa5.94□□□□□ -1.46
HDAC3-207ENST00000475549 GDI2P50395 445 aaKnown RBP5.94□□□□□ -1.46
HDAC3-207ENST00000475549 ERFP50548 548 aa5.94□□□□□ -1.46
HDAC3-207ENST00000475549 FXYD6P3P58550 94 aa5.94□□□□□ -1.46
HDAC3-207ENST00000475549 PPP1CBP62140 327 aa5.94□□□□□ -1.46
HDAC3-207ENST00000475549 GUCA2AQ02747 115 aa5.94□□□□□ -1.46
HDAC3-207ENST00000475549 LIPEQ05469 1076 aa5.94□□□□□ -1.46
HDAC3-207ENST00000475549 CD47Q08722 323 aa5.94□□□□□ -1.46
HDAC3-207ENST00000475549 TAF11Q15544 211 aa5.94□□□□□ -1.46
HDAC3-207ENST00000475549 HFEQ30201 348 aa5.94□□□□□ -1.46
HDAC3-207ENST00000475549 MESTQ5EB52 335 aa5.94□□□□□ -1.46
HDAC3-207ENST00000475549 TMPRSS11FQ6ZWK6 438 aa5.94□□□□□ -1.46
HDAC3-207ENST00000475549 MBOAT2Q6ZWT7 520 aa5.94□□□□□ -1.46
HDAC3-207ENST00000475549 CBLL1Q75N03 491 aa5.94□□□□□ -1.46
HDAC3-207ENST00000475549 ZNF771Q7L3S4 317 aaPredicted RBP5.94□□□□□ -1.46
HDAC3-207ENST00000475549 FAM122BQ7Z309 247 aa5.94□□□□□ -1.46
HDAC3-207ENST00000475549 HDDC2Q7Z4H3 204 aa5.94□□□□□ -1.46
HDAC3-207ENST00000475549 OAFQ86UD1 273 aa5.94□□□□□ -1.46
HDAC3-207ENST00000475549 TREML1Q86YW5 311 aa5.94□□□□□ -1.46
HDAC3-207ENST00000475549 OFCC1Q8IZS5 231 aa5.94□□□□□ -1.46
HDAC3-207ENST00000475549 FAM156AQ8NDB6 213 aa5.94□□□□□ -1.46
HDAC3-207ENST00000475549 OR51F2Q8NH61 342 aa5.94□□□□□ -1.46
HDAC3-207ENST00000475549 SLC7A13Q8TCU3 470 aa5.94□□□□□ -1.46
HDAC3-207ENST00000475549 GEMIN6Q8WXD5 167 aaKnown RBP5.94□□□□□ -1.46
HDAC3-207ENST00000475549 SLC7A6Q92536 515 aa5.94□□□□□ -1.46
HDAC3-207ENST00000475549 Q96M85 177 aa5.94□□□□□ -1.46
HDAC3-207ENST00000475549 RBP7Q96R05 134 aa5.94□□□□□ -1.46
HDAC3-207ENST00000475549 GPA33Q99795 319 aa5.94□□□□□ -1.46
HDAC3-207ENST00000475549 FNDC11Q9BVV2 318 aa5.94□□□□□ -1.46
HDAC3-207ENST00000475549 SAP30LQ9HAJ7 183 aa5.94□□□□□ -1.46
HDAC3-207ENST00000475549 NMNAT1Q9HAN9 279 aaPredicted RBP5.94□□□□□ -1.46
HDAC3-207ENST00000475549 ESM1Q9NQ30 184 aa5.94□□□□□ -1.46
HDAC3-207ENST00000475549 POLE4Q9NR33 117 aa5.94□□□□□ -1.46
HDAC3-207ENST00000475549 MMP26Q9NRE1 261 aa5.94□□□□□ -1.46
HDAC3-207ENST00000475549 DECR2Q9NUI1 292 aa5.94□□□□□ -1.46
HDAC3-207ENST00000475549 EIF3KQ9UBQ5 218 aaKnown RBP5.94□□□□□ -1.46
HDAC3-207ENST00000475549 GPR160Q9UJ42 338 aa5.94□□□□□ -1.46
HDAC3-207ENST00000475549 GRIP1Q9Y3R0 1128 aa5.94□□□□□ -1.46
HDAC3-207ENST00000475549 MEGF8Q7Z7M0 2845 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 A0A0A6YYJ9 748 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 HTR3EA5X5Y0 456 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 EFCAB9A8MZ26 197 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 CXCR6O00574 342 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 PNPP00491 289 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 FSHBP01225 129 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 IFNW1P05000 195 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 CD55P08174 381 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 CD14P08571 375 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 TROVE2P10155 538 aaKnown RBP eCLIP5.93□□□□□ -1.46
HDAC3-207ENST00000475549 COX4I1P13073 169 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 NCK1P16333 377 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 CTLA4P16410 223 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 MSR1P21757 451 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 PCMT1P22061 227 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 GCH1P30793 250 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 GPR4P46093 362 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 COMPP49747 757 aaPredicted RBP5.93□□□□□ -1.46
HDAC3-207ENST00000475549 GSK3BP49841 420 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 SLC7A2P52569 658 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 HILS1P60008 231 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 SEC61A1P61619 476 aaKnown RBP5.93□□□□□ -1.46
HDAC3-207ENST00000475549 CDK5R2Q13319 367 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 TRAM2Q15035 370 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 SEC23BQ15437 767 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 MAPRE2Q15555 327 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 MOGQ16653 247 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 RSPO1Q2MKA7 263 aaPredicted RBP5.93□□□□□ -1.46
HDAC3-207ENST00000475549 ZNF718Q3SXZ3 478 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 FAM209AQ5JX71 171 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 ZNF730Q6ZMV8 503 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 VASH1Q7L8A9 365 aaPredicted RBP5.93□□□□□ -1.46
HDAC3-207ENST00000475549 RNF113BQ8IZP6 322 aaKnown RBP5.93□□□□□ -1.46
HDAC3-207ENST00000475549 FAM86B1Q8N7N1 296 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 PCYOX1LQ8NBM8 494 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 RP9Q8TA86 221 aaKnown RBP5.93□□□□□ -1.46
HDAC3-207ENST00000475549 SNX33Q8WV41 574 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 ZFAND2BQ8WV99 257 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 ACOT11Q8WXI4 607 aaPredicted RBP5.93□□□□□ -1.46
HDAC3-207ENST00000475549 DVL3Q92997 716 aaPredicted RBP5.93□□□□□ -1.46
HDAC3-207ENST00000475549 HSH2DQ96JZ2 352 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 SIGLEC11Q96RL6 698 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 FUZQ9BT04 418 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 KCNN2Q9H2S1 579 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 CCDC134Q9H6E4 229 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 GID8Q9NWU2 228 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 NDUFAF4Q9P032 175 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 STX18Q9P2W9 335 aaKnown RBP5.93□□□□□ -1.46
HDAC3-207ENST00000475549 IL20RAQ9UHF4 553 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 SIGLEC7Q9Y286 467 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 STARD10Q9Y365 291 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 CAPN7Q9Y6W3 813 aa5.93□□□□□ -1.46
HDAC3-207ENST00000475549 TRBV4-1A0A0J9YWV2 114 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 A0A1W2PPL8 197 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 PLSCR5A0PG75 271 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms