RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 E2F6O75461 281 aa13.04□□□□□ -0.32
VARS-223ENST00000474643 FPR3P25089 353 aa13.04□□□□□ -0.32
VARS-223ENST00000474643 FASP25445 335 aa13.04□□□□□ -0.32
VARS-223ENST00000474643 APEX1P27695 318 aaKnown RBP13.04□□□□□ -0.32
VARS-223ENST00000474643 SLC6A6P31641 620 aa13.04□□□□□ -0.32
VARS-223ENST00000474643 LCN6P62502 163 aa13.04□□□□□ -0.32
VARS-223ENST00000474643 PLP2Q04941 152 aa13.04□□□□□ -0.32
VARS-223ENST00000474643 FMODQ06828 376 aa13.04□□□□□ -0.32
VARS-223ENST00000474643 FHL1Q13642 323 aa13.04□□□□□ -0.32
VARS-223ENST00000474643 SGCAQ16586 387 aa13.04□□□□□ -0.32
VARS-223ENST00000474643 HIST3H3Q16695 136 aa13.04□□□□□ -0.32
VARS-223ENST00000474643 NKPD1Q17RQ9 610 aa13.04□□□□□ -0.32
VARS-223ENST00000474643 THEM4Q5T1C6 240 aa13.04□□□□□ -0.32
VARS-223ENST00000474643 DPY19L2P2Q6ZN68 376 aa13.04□□□□□ -0.32
VARS-223ENST00000474643 IL17RELQ6ZVW7 336 aa13.04□□□□□ -0.32
VARS-223ENST00000474643 ARIH2OSQ8N7S6 290 aa13.04□□□□□ -0.32
VARS-223ENST00000474643 ICA1LQ8NDH6 482 aa13.04□□□□□ -0.32
VARS-223ENST00000474643 OR9Q2Q8NGE9 314 aa13.04□□□□□ -0.32
VARS-223ENST00000474643 ZNF519Q8TB69 540 aa13.04□□□□□ -0.32
VARS-223ENST00000474643 MSI2Q96DH6 328 aaKnown RBP13.04□□□□□ -0.32
VARS-223ENST00000474643 NRBF2Q96F24 287 aa13.04□□□□□ -0.32
VARS-223ENST00000474643 SNX18Q96RF0 628 aa13.04□□□□□ -0.32
VARS-223ENST00000474643 DOK1Q99704 481 aa13.04□□□□□ -0.32
VARS-223ENST00000474643 GPA33Q99795 319 aa13.04□□□□□ -0.32
VARS-223ENST00000474643 SH3GL3Q99963 347 aa13.04□□□□□ -0.32
VARS-223ENST00000474643 IFT27Q9BW83 186 aa13.04□□□□□ -0.32
VARS-223ENST00000474643 OSBPL10Q9BXB5 764 aa13.04□□□□□ -0.32
VARS-223ENST00000474643 MS4A5Q9H3V2 200 aa13.04□□□□□ -0.32
VARS-223ENST00000474643 RERGLQ9H628 205 aa13.04□□□□□ -0.32
VARS-223ENST00000474643 CDH20Q9HBT6 801 aa13.04□□□□□ -0.32
VARS-223ENST00000474643 TMEM38BQ9NVV0 291 aa13.04□□□□□ -0.32
VARS-223ENST00000474643 REV1Q9UBZ9 1251 aa13.04□□□□□ -0.32
VARS-223ENST00000474643 DUSP13Q9UII6 198 aa13.04□□□□□ -0.32
VARS-223ENST00000474643 GPR160Q9UJ42 338 aa13.04□□□□□ -0.32
VARS-223ENST00000474643 IER3IP1Q9Y5U9 82 aa13.04□□□□□ -0.32
VARS-223ENST00000474643 DNHD1Q96M86 4753 aa13.03□□□□□ -0.32
VARS-223ENST00000474643 IQCMA0A1B0GVH7 501 aa13.03□□□□□ -0.32
VARS-223ENST00000474643 A0A1W2PPL8 197 aa13.03□□□□□ -0.32
VARS-223ENST00000474643 LRP5LA4QPB2 252 aa13.03□□□□□ -0.32
VARS-223ENST00000474643 ARRDC5A6NEK1 342 aa13.03□□□□□ -0.32
VARS-223ENST00000474643 VWC2LB2RUY7 222 aa13.03□□□□□ -0.32
VARS-223ENST00000474643 SOCS2O14508 198 aa13.03□□□□□ -0.32
VARS-223ENST00000474643 PPP1R3DO95685 299 aa13.03□□□□□ -0.32
VARS-223ENST00000474643 PTHP01270 115 aa13.03□□□□□ -0.32
VARS-223ENST00000474643 NOS3P29474 1203 aa13.03□□□□□ -0.32
VARS-223ENST00000474643 SDHAP31040 664 aa13.03□□□□□ -0.32
VARS-223ENST00000474643 SRP14P37108 136 aaKnown RBP13.03□□□□□ -0.32
VARS-223ENST00000474643 ELF3P78545 371 aaPredicted RBP13.03□□□□□ -0.32
VARS-223ENST00000474643 TSPAN31Q12999 210 aa13.03□□□□□ -0.32
VARS-223ENST00000474643 KRR1Q13601 381 aaKnown RBP13.03□□□□□ -0.32
VARS-223ENST00000474643 RAB39AQ14964 217 aa13.03□□□□□ -0.32
VARS-223ENST00000474643 ATP6AP1Q15904 470 aa13.03□□□□□ -0.32
VARS-223ENST00000474643 SLC36A2Q495M3 483 aa13.03□□□□□ -0.32
VARS-223ENST00000474643 FAM120AOSQ5T036 256 aa13.03□□□□□ -0.32
VARS-223ENST00000474643 GPR139Q6DWJ6 353 aa13.03□□□□□ -0.32
VARS-223ENST00000474643 C1orf94Q6P1W5 598 aa13.03□□□□□ -0.32
VARS-223ENST00000474643 PGBD2Q6P3X8 592 aa13.03□□□□□ -0.32
VARS-223ENST00000474643 THSD4Q6ZMP0 1018 aa13.03□□□□□ -0.32
VARS-223ENST00000474643 SLC16A14Q7RTX9 510 aa13.03□□□□□ -0.32
VARS-223ENST00000474643 LRRC18Q8N456 261 aa13.03□□□□□ -0.32
VARS-223ENST00000474643 CLDN22Q8N7P3 220 aa13.03□□□□□ -0.32
VARS-223ENST00000474643 AQP11Q8NBQ7 271 aa13.03□□□□□ -0.32
VARS-223ENST00000474643 OR52L1Q8NGH7 329 aa13.03□□□□□ -0.32
VARS-223ENST00000474643 SNX33Q8WV41 574 aa13.03□□□□□ -0.32
VARS-223ENST00000474643 MRPL24Q96A35 216 aaKnown RBP13.03□□□□□ -0.32
VARS-223ENST00000474643 RASD2Q96D21 266 aa13.03□□□□□ -0.32
VARS-223ENST00000474643 SAMD8Q96LT4 415 aa13.03□□□□□ -0.32
VARS-223ENST00000474643 ERMAPQ96PL5 475 aaPredicted RBP13.03□□□□□ -0.32
VARS-223ENST00000474643 MRPL37Q9BZE1 423 aaKnown RBP13.03□□□□□ -0.32
VARS-223ENST00000474643 OR52D1Q9H346 318 aa13.03□□□□□ -0.32
VARS-223ENST00000474643 SMURF2Q9HAU4 748 aa13.03□□□□□ -0.32
VARS-223ENST00000474643 S100A14Q9HCY8 104 aa13.03□□□□□ -0.32
VARS-223ENST00000474643 B3GNT2Q9NY97 397 aa13.03□□□□□ -0.32
VARS-223ENST00000474643 FZR1Q9UM11 496 aa13.03□□□□□ -0.32
VARS-223ENST00000474643 ARFGEF3Q5TH69 2177 aa13.03□□□□□ -0.32
VARS-223ENST00000474643 CUBNO60494 3623 aa13.02□□□□□ -0.33
VARS-223ENST00000474643 MXRA5Q9NR99 2828 aa13.02□□□□□ -0.33
VARS-223ENST00000474643 SLC22A23A1A5C7 686 aa13.02□□□□□ -0.33
VARS-223ENST00000474643 H3BNX3 289 aa13.02□□□□□ -0.33
VARS-223ENST00000474643 ZNF14P17017 642 aaPredicted RBP13.02□□□□□ -0.33
VARS-223ENST00000474643 ZNF26P17031 533 aaPredicted RBP13.02□□□□□ -0.33
VARS-223ENST00000474643 IGFBP5P24593 272 aa13.02□□□□□ -0.33
VARS-223ENST00000474643 CDAP32320 146 aa13.02□□□□□ -0.33
VARS-223ENST00000474643 GLRXP35754 106 aa13.02□□□□□ -0.33
VARS-223ENST00000474643 GSSP48637 474 aa13.02□□□□□ -0.33
VARS-223ENST00000474643 EVX1P49640 407 aa13.02□□□□□ -0.33
VARS-223ENST00000474643 HSF2Q03933 536 aa13.02□□□□□ -0.33
VARS-223ENST00000474643 RIPK1Q13546 671 aa13.02□□□□□ -0.33
VARS-223ENST00000474643 MICAQ29983 383 aa13.02□□□□□ -0.33
VARS-223ENST00000474643 TBC1D28Q2M2D7 210 aa13.02□□□□□ -0.33
VARS-223ENST00000474643 RFX4Q33E94 735 aa13.02□□□□□ -0.33
VARS-223ENST00000474643 C10orf128Q5T292 105 aa13.02□□□□□ -0.33
VARS-223ENST00000474643 UGT2A3Q6UWM9 527 aa13.02□□□□□ -0.33
VARS-223ENST00000474643 ZNF627Q7L945 461 aa13.02□□□□□ -0.33
VARS-223ENST00000474643 DPPA2Q7Z7J5 298 aa13.02□□□□□ -0.33
VARS-223ENST00000474643 JAZF1Q86VZ6 243 aa13.02□□□□□ -0.33
VARS-223ENST00000474643 SKA3Q8IX90 412 aa13.02□□□□□ -0.33
VARS-223ENST00000474643 ZNF786Q8N393 782 aa13.02□□□□□ -0.33
VARS-223ENST00000474643 SLC30A7Q8NEW0 376 aa13.02□□□□□ -0.33
VARS-223ENST00000474643 OR10G2Q8NGC3 310 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms