RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 TRIM36Q9NQ86 728 aa17.96■□□□□ 0.47
CDHR3-210ENST00000474330 ENPP5Q9UJA9 477 aa17.96■□□□□ 0.47
CDHR3-210ENST00000474330 ASH1LQ9NR48 2969 aaKnown RBP17.96■□□□□ 0.47
CDHR3-210ENST00000474330 RP1L1Q8IWN7 2480 aaPredicted RBP17.95■□□□□ 0.46
CDHR3-210ENST00000474330 CD8B2A6NJW9 211 aa17.95■□□□□ 0.46
CDHR3-210ENST00000474330 MAGEB4O15481 346 aaPredicted RBP17.95■□□□□ 0.46
CDHR3-210ENST00000474330 SULT1C4O75897 302 aa17.95■□□□□ 0.46
CDHR3-210ENST00000474330 AGTR1P30556 359 aa17.95■□□□□ 0.46
CDHR3-210ENST00000474330 NSUN5P2Q63ZY6 315 aa17.95■□□□□ 0.46
CDHR3-210ENST00000474330 ZNF585AQ6P3V2 769 aa17.95■□□□□ 0.46
CDHR3-210ENST00000474330 SLC16A12Q6ZSM3 486 aa17.95■□□□□ 0.46
CDHR3-210ENST00000474330 LINGO2Q7L985 606 aa17.95■□□□□ 0.46
CDHR3-210ENST00000474330 NUFIP2Q7Z417 695 aaKnown RBP17.95■□□□□ 0.46
CDHR3-210ENST00000474330 ATCAYQ86WG3 371 aa17.95■□□□□ 0.46
CDHR3-210ENST00000474330 RAB2BQ8WUD1 216 aa17.95■□□□□ 0.46
CDHR3-210ENST00000474330 UFD1Q92890 307 aa17.95■□□□□ 0.46
CDHR3-210ENST00000474330 APH1AQ96BI3 265 aa17.95■□□□□ 0.46
CDHR3-210ENST00000474330 ZNF837Q96EG3 531 aaPredicted RBP17.95■□□□□ 0.46
CDHR3-210ENST00000474330 ALKBH3Q96Q83 286 aaPredicted RBP17.95■□□□□ 0.46
CDHR3-210ENST00000474330 AMELYQ99218 206 aa17.95■□□□□ 0.46
CDHR3-210ENST00000474330 TTYH2Q9BSA4 534 aa17.95■□□□□ 0.46
CDHR3-210ENST00000474330 NELFAQ9H3P2 528 aa17.95■□□□□ 0.46
CDHR3-210ENST00000474330 CRLF2Q9HC73 371 aa17.95■□□□□ 0.46
CDHR3-210ENST00000474330 CYB5R1Q9UHQ9 305 aa17.95■□□□□ 0.46
CDHR3-210ENST00000474330 WDR1O75083 606 aa17.94■□□□□ 0.46
CDHR3-210ENST00000474330 EDNRAP25101 427 aa17.94■□□□□ 0.46
CDHR3-210ENST00000474330 PTGER4P35408 488 aa17.94■□□□□ 0.46
CDHR3-210ENST00000474330 TAS2R43P59537 309 aa17.94■□□□□ 0.46
CDHR3-210ENST00000474330 LSM6P62312 80 aaKnown RBP17.94■□□□□ 0.46
CDHR3-210ENST00000474330 MRPS34P82930 218 aaKnown RBP17.94■□□□□ 0.46
CDHR3-210ENST00000474330 EIF2B1Q14232 305 aaKnown RBP17.94■□□□□ 0.46
CDHR3-210ENST00000474330 STK11Q15831 433 aa17.94■□□□□ 0.46
CDHR3-210ENST00000474330 LIPKQ5VXJ0 399 aa17.94■□□□□ 0.46
CDHR3-210ENST00000474330 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.94■□□□□ 0.46
CDHR3-210ENST00000474330 PELI1Q96FA3 418 aa17.94■□□□□ 0.46
CDHR3-210ENST00000474330 BCL7BQ9BQE9 202 aa17.94■□□□□ 0.46
CDHR3-210ENST00000474330 ABHD6Q9BV23 337 aa17.94■□□□□ 0.46
CDHR3-210ENST00000474330 GPR35Q9HC97 309 aa17.94■□□□□ 0.46
CDHR3-210ENST00000474330 SLC7A10Q9NS82 523 aa17.94■□□□□ 0.46
CDHR3-210ENST00000474330 NDUFB11Q9NX14 153 aa17.94■□□□□ 0.46
CDHR3-210ENST00000474330 GNG8Q9UK08 70 aa17.94■□□□□ 0.46
CDHR3-210ENST00000474330 FREM1Q5H8C1 2179 aa17.94■□□□□ 0.46
CDHR3-210ENST00000474330 ARHGAP21Q5T5U3 1957 aa17.94■□□□□ 0.46
CDHR3-210ENST00000474330 METTL15A6NJ78 407 aa17.94■□□□□ 0.46
CDHR3-210ENST00000474330 RPL36A-HNRNPH2H7BZ11 118 aa17.94■□□□□ 0.46
CDHR3-210ENST00000474330 GABARAPO95166 117 aa17.94■□□□□ 0.46
CDHR3-210ENST00000474330 KRT8P05787 483 aa17.94■□□□□ 0.46
CDHR3-210ENST00000474330 TACSTD2P09758 323 aa17.94■□□□□ 0.46
CDHR3-210ENST00000474330 MSR1P21757 451 aa17.94■□□□□ 0.46
CDHR3-210ENST00000474330 GBX2P52951 348 aaPredicted RBP17.94■□□□□ 0.46
CDHR3-210ENST00000474330 ROM1Q03395 351 aa17.94■□□□□ 0.46
CDHR3-210ENST00000474330 GPR50Q13585 617 aa17.94■□□□□ 0.46
CDHR3-210ENST00000474330 GUSBP1Q15486 140 aa17.94■□□□□ 0.46
CDHR3-210ENST00000474330 KCTD18Q6PI47 426 aaPredicted RBP17.94■□□□□ 0.46
CDHR3-210ENST00000474330 DCXRQ7Z4W1 244 aa17.94■□□□□ 0.46
CDHR3-210ENST00000474330 OR52N5Q8NH56 324 aa17.94■□□□□ 0.46
CDHR3-210ENST00000474330 FAM57AQ8TBR7 257 aa17.94■□□□□ 0.46
CDHR3-210ENST00000474330 ST7LQ8TDW4 575 aa17.94■□□□□ 0.46
CDHR3-210ENST00000474330 NABP1Q96AH0 204 aa17.94■□□□□ 0.46
CDHR3-210ENST00000474330 DOCK7Q96N67 2140 aa17.94■□□□□ 0.46
CDHR3-210ENST00000474330 OR8B4Q96RC9 309 aa17.94■□□□□ 0.46
CDHR3-210ENST00000474330 EMC7Q9NPA0 242 aa17.94■□□□□ 0.46
CDHR3-210ENST00000474330 MRM2Q9UI43 246 aaKnown RBP17.94■□□□□ 0.46
CDHR3-210ENST00000474330 CACNA1CQ13936 2221 aa17.93■□□□□ 0.46
CDHR3-210ENST00000474330 HSPB2A8KAH6 182 aa17.93■□□□□ 0.46
CDHR3-210ENST00000474330 E9PI62 339 aa17.93■□□□□ 0.46
CDHR3-210ENST00000474330 PSMD9O00233 223 aa17.93■□□□□ 0.46
CDHR3-210ENST00000474330 NOL3O60936 208 aaKnown RBP17.93■□□□□ 0.46
CDHR3-210ENST00000474330 KRT33AO76009 404 aa17.93■□□□□ 0.46
CDHR3-210ENST00000474330 ABHD16AO95870 558 aa17.93■□□□□ 0.46
CDHR3-210ENST00000474330 TPOP07202 933 aa17.93■□□□□ 0.46
CDHR3-210ENST00000474330 NPR2P20594 1047 aa17.93■□□□□ 0.46
CDHR3-210ENST00000474330 GTF2A1P52655 376 aaPredicted RBP17.93■□□□□ 0.46
CDHR3-210ENST00000474330 ROR2Q01974 943 aaKnown RBP17.93■□□□□ 0.46
CDHR3-210ENST00000474330 HSPB2Q16082 182 aa17.93■□□□□ 0.46
CDHR3-210ENST00000474330 SGCAQ16586 387 aa17.93■□□□□ 0.46
CDHR3-210ENST00000474330 CEACAM16Q2WEN9 425 aa17.93■□□□□ 0.46
CDHR3-210ENST00000474330 OR2A2Q6IF42 318 aa17.93■□□□□ 0.46
CDHR3-210ENST00000474330 RPTNQ6XPR3 784 aa17.93■□□□□ 0.46
CDHR3-210ENST00000474330 LINC00346Q8IVM7 164 aa17.93■□□□□ 0.46
CDHR3-210ENST00000474330 ZNF679Q8IYX0 411 aa17.93■□□□□ 0.46
CDHR3-210ENST00000474330 C9orf106Q8NAJ2 232 aa17.93■□□□□ 0.46
CDHR3-210ENST00000474330 HAVCR2Q8TDQ0 301 aa17.93■□□□□ 0.46
CDHR3-210ENST00000474330 C12orf43Q96C57 262 aaKnown RBP17.93■□□□□ 0.46
CDHR3-210ENST00000474330 TM9SF2Q99805 663 aa17.93■□□□□ 0.46
CDHR3-210ENST00000474330 ACOXLQ9NUZ1 547 aa17.93■□□□□ 0.46
CDHR3-210ENST00000474330 LHFPL6Q9Y693 200 aa17.93■□□□□ 0.46
CDHR3-210ENST00000474330 NCOA6Q14686 2063 aaPredicted RBP17.93■□□□□ 0.46
CDHR3-210ENST00000474330 FIGNL2A6NMB9 653 aa17.92■□□□□ 0.46
CDHR3-210ENST00000474330 OR8G3PP0DMU2 310 aa17.92■□□□□ 0.46
CDHR3-210ENST00000474330 CELP19835 753 aa17.92■□□□□ 0.46
CDHR3-210ENST00000474330 GADD45AP24522 165 aa17.92■□□□□ 0.46
CDHR3-210ENST00000474330 UQCRFS1P47985 274 aa17.92■□□□□ 0.46
CDHR3-210ENST00000474330 SIRPAP78324 504 aa17.92■□□□□ 0.46
CDHR3-210ENST00000474330 SRSF1Q07955 248 aaKnown RBP eCLIP17.92■□□□□ 0.464e-7■■□□□ 12.4
CDHR3-210ENST00000474330 MRPL28Q13084 256 aaKnown RBP17.92■□□□□ 0.46
CDHR3-210ENST00000474330 CTF1Q16619 201 aa17.92■□□□□ 0.46
CDHR3-210ENST00000474330 CCDC58Q4VC31 144 aa17.92■□□□□ 0.46
CDHR3-210ENST00000474330 FAM27BQ5VT28 67 aa17.92■□□□□ 0.46
CDHR3-210ENST00000474330 FAM214BQ7L5A3 538 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms