RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 SLC25A2Q9BXI2 301 aa2.29□□□□□ -2.04
PTCD3-209ENST00000472044 TMEM185BQ9H7F4 350 aa2.29□□□□□ -2.04
PTCD3-209ENST00000472044 UBE2ZQ9H832 354 aaPredicted RBP2.29□□□□□ -2.04
PTCD3-209ENST00000472044 KCNJ16Q9NPI9 418 aa2.29□□□□□ -2.04
PTCD3-209ENST00000472044 SAMSN1Q9NSI8 373 aaKnown RBP2.29□□□□□ -2.04
PTCD3-209ENST00000472044 HRASLS2Q9NWW9 162 aa2.29□□□□□ -2.04
PTCD3-209ENST00000472044 RAB20Q9NX57 234 aa2.29□□□□□ -2.04
PTCD3-209ENST00000472044 PITPNC1Q9UKF7 332 aa2.29□□□□□ -2.04
PTCD3-209ENST00000472044 VANGL2Q9ULK5 521 aa2.29□□□□□ -2.04
PTCD3-209ENST00000472044 TMED5Q9Y3A6 229 aa2.29□□□□□ -2.04
PTCD3-209ENST00000472044 CABIN1Q9Y6J0 2220 aa2.28□□□□□ -2.04
PTCD3-209ENST00000472044 IGLV4-60A0A075B6I1 120 aa2.28□□□□□ -2.04
PTCD3-209ENST00000472044 OR2AG2A6NM03 316 aa2.28□□□□□ -2.04
PTCD3-209ENST00000472044 LYRM9A8MSI8 78 aa2.28□□□□□ -2.04
PTCD3-209ENST00000472044 EIF4E2O60573 245 aaKnown RBP2.28□□□□□ -2.04
PTCD3-209ENST00000472044 GABARAPO95166 117 aa2.28□□□□□ -2.04
PTCD3-209ENST00000472044 H6PDO95479 791 aa2.28□□□□□ -2.04
PTCD3-209ENST00000472044 CISD3P0C7P0 127 aa2.28□□□□□ -2.04
PTCD3-209ENST00000472044 OR5H8P0DN80 308 aa2.28□□□□□ -2.04
PTCD3-209ENST00000472044 IGHV1-8P0DP01 117 aa2.28□□□□□ -2.04
PTCD3-209ENST00000472044 PGAM1P18669 254 aa2.28□□□□□ -2.04
PTCD3-209ENST00000472044 C21orf59P57076 290 aa2.28□□□□□ -2.04
PTCD3-209ENST00000472044 RGS8P57771 180 aaPredicted RBP2.28□□□□□ -2.04
PTCD3-209ENST00000472044 ESRRGP62508 458 aa2.28□□□□□ -2.04
PTCD3-209ENST00000472044 CCNA1P78396 465 aa2.28□□□□□ -2.04
PTCD3-209ENST00000472044 ARG2P78540 354 aa2.28□□□□□ -2.04
PTCD3-209ENST00000472044 TGM3Q08188 693 aa2.28□□□□□ -2.04
PTCD3-209ENST00000472044 SLAQ13239 276 aa2.28□□□□□ -2.04
PTCD3-209ENST00000472044 MAB21L1Q13394 359 aa2.28□□□□□ -2.04
PTCD3-209ENST00000472044 EIF4EBP1Q13541 118 aaPredicted RBP2.28□□□□□ -2.04
PTCD3-209ENST00000472044 PON2Q15165 354 aa2.28□□□□□ -2.04
PTCD3-209ENST00000472044 PTGES3Q15185 160 aaKnown RBP2.28□□□□□ -2.04
PTCD3-209ENST00000472044 OR7A5Q15622 319 aa2.28□□□□□ -2.04
PTCD3-209ENST00000472044 SPANXN2Q5MJ10 180 aa2.28□□□□□ -2.04
PTCD3-209ENST00000472044 FAM71E1Q6IPT2 247 aa2.28□□□□□ -2.04
PTCD3-209ENST00000472044 ARL9Q6T311 187 aa2.28□□□□□ -2.04
PTCD3-209ENST00000472044 Q6ZR03 302 aa2.28□□□□□ -2.04
PTCD3-209ENST00000472044 TMEM150AQ86TG1 271 aa2.28□□□□□ -2.04
PTCD3-209ENST00000472044 PGAM4Q8N0Y7 254 aa2.28□□□□□ -2.04
PTCD3-209ENST00000472044 OR5W2Q8NH69 310 aa2.28□□□□□ -2.04
PTCD3-209ENST00000472044 ABHD3Q8WU67 409 aa2.28□□□□□ -2.04
PTCD3-209ENST00000472044 TSEN15Q8WW01 171 aaKnown RBP2.28□□□□□ -2.04
PTCD3-209ENST00000472044 GALNT14Q96FL9 552 aa2.28□□□□□ -2.04
PTCD3-209ENST00000472044 FAM192AQ9GZU8 254 aa2.28□□□□□ -2.04
PTCD3-209ENST00000472044 SAV1Q9H4B6 383 aaPredicted RBP2.28□□□□□ -2.04
PTCD3-209ENST00000472044 ZNF160Q9HCG1 818 aa2.28□□□□□ -2.04
PTCD3-209ENST00000472044 CYTL1Q9NRR1 136 aa2.28□□□□□ -2.04
PTCD3-209ENST00000472044 NECAP2Q9NVZ3 263 aa2.28□□□□□ -2.04
PTCD3-209ENST00000472044 PCM1Q15154 2024 aa2.27□□□□□ -2.05
PTCD3-209ENST00000472044 NINLQ9Y2I6 1382 aa2.27□□□□□ -2.05
PTCD3-209ENST00000472044 IGKV2-28A0A075B6P5 120 aa2.27□□□□□ -2.05
PTCD3-209ENST00000472044 A0A075B6Q4 140 aa2.27□□□□□ -2.05
PTCD3-209ENST00000472044 DFNA5O60443 496 aa2.27□□□□□ -2.05
PTCD3-209ENST00000472044 HMMRO75330 724 aa2.27□□□□□ -2.05
PTCD3-209ENST00000472044 ENTPD5O75356 428 aa2.27□□□□□ -2.05
PTCD3-209ENST00000472044 CLDN11O75508 207 aa2.27□□□□□ -2.05
PTCD3-209ENST00000472044 CTDNEP1O95476 244 aa2.27□□□□□ -2.05
PTCD3-209ENST00000472044 IGKV2D-28P01615 120 aa2.27□□□□□ -2.05
PTCD3-209ENST00000472044 HLA-DPB1P04440 258 aa2.27□□□□□ -2.05
PTCD3-209ENST00000472044 BCHEP06276 602 aa2.27□□□□□ -2.05
PTCD3-209ENST00000472044 SERPINE2P07093 398 aa2.27□□□□□ -2.05
PTCD3-209ENST00000472044 CT45A6P0DMU7 189 aa2.27□□□□□ -2.05
PTCD3-209ENST00000472044 CT45A5P0DMU8 189 aa2.27□□□□□ -2.05
PTCD3-209ENST00000472044 CT45A7P0DMV0 189 aa2.27□□□□□ -2.05
PTCD3-209ENST00000472044 PSMC3P17980 439 aa2.27□□□□□ -2.05
PTCD3-209ENST00000472044 WARSP23381 471 aaKnown RBP2.27□□□□□ -2.05
PTCD3-209ENST00000472044 DCKP27707 260 aa2.27□□□□□ -2.05
PTCD3-209ENST00000472044 STXBP1P61764 594 aaKnown RBP2.27□□□□□ -2.05
PTCD3-209ENST00000472044 RPS15P62841 145 aaKnown RBP2.27□□□□□ -2.05
PTCD3-209ENST00000472044 SELENBP1Q13228 472 aa2.27□□□□□ -2.05
PTCD3-209ENST00000472044 CUL2Q13617 745 aa2.27□□□□□ -2.05
PTCD3-209ENST00000472044 RCN1Q15293 331 aa2.27□□□□□ -2.05
PTCD3-209ENST00000472044 SF3A2Q15428 464 aaKnown RBP2.27□□□□□ -2.05
PTCD3-209ENST00000472044 ZNF726P1Q15940 193 aa2.27□□□□□ -2.05
PTCD3-209ENST00000472044 HSDL1Q3SXM5 330 aa2.27□□□□□ -2.05
PTCD3-209ENST00000472044 CT45A1Q5HYN5 189 aa2.27□□□□□ -2.05
PTCD3-209ENST00000472044 SOHLH1Q5JUK2 328 aa2.27□□□□□ -2.05
PTCD3-209ENST00000472044 PPM1LQ5SGD2 360 aa2.27□□□□□ -2.05
PTCD3-209ENST00000472044 Q5W150 140 aa2.27□□□□□ -2.05
PTCD3-209ENST00000472044 IGFL3Q6UXB1 125 aa2.27□□□□□ -2.05
PTCD3-209ENST00000472044 FBXW12Q6X9E4 464 aa2.27□□□□□ -2.05
PTCD3-209ENST00000472044 BZW1Q7L1Q6 419 aaKnown RBP2.27□□□□□ -2.05
PTCD3-209ENST00000472044 CENPQQ7L2Z9 268 aaPredicted RBP2.27□□□□□ -2.05
PTCD3-209ENST00000472044 CT45A3Q8NHU0 189 aa2.27□□□□□ -2.05
PTCD3-209ENST00000472044 MRGPRFQ96AM1 343 aa2.27□□□□□ -2.05
PTCD3-209ENST00000472044 NDFIP1Q9BT67 221 aa2.27□□□□□ -2.05
PTCD3-209ENST00000472044 SYNDIG1Q9H7V2 258 aa2.27□□□□□ -2.05
PTCD3-209ENST00000472044 FAM49BQ9NUQ9 324 aa2.27□□□□□ -2.05
PTCD3-209ENST00000472044 MTCH1Q9NZJ7 389 aa2.27□□□□□ -2.05
PTCD3-209ENST00000472044 CCDC59Q9P031 241 aaKnown RBP2.27□□□□□ -2.05
PTCD3-209ENST00000472044 UVRAGQ9P2Y5 699 aa2.27□□□□□ -2.05
PTCD3-209ENST00000472044 GPATCH8Q9UKJ3 1502 aaKnown RBP2.27□□□□□ -2.05
PTCD3-209ENST00000472044 ADAMTS13Q76LX8 1427 aa2.26□□□□□ -2.05
PTCD3-209ENST00000472044 LRCOL1A6NCL2 159 aa2.26□□□□□ -2.05
PTCD3-209ENST00000472044 SMCO2A6NFE2 343 aa2.26□□□□□ -2.05
PTCD3-209ENST00000472044 SMKR1H3BMG3 65 aa2.26□□□□□ -2.05
PTCD3-209ENST00000472044 DNALI1O14645 258 aaPredicted RBP2.26□□□□□ -2.05
PTCD3-209ENST00000472044 SCAMP2O15127 329 aaKnown RBP2.26□□□□□ -2.05
PTCD3-209ENST00000472044 BET1O15155 118 aa2.26□□□□□ -2.05
PTCD3-209ENST00000472044 NUPL2O15504 423 aaKnown RBP2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms