RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 FOXL2NBQ6ZUU3 175 aa6.84□□□□□ -1.31
USP48-207ENST00000471752 PTCHD4Q6ZW05 846 aa6.84□□□□□ -1.31
USP48-207ENST00000471752 RNF148Q8N7C7 305 aa6.84□□□□□ -1.31
USP48-207ENST00000471752 FAM156AQ8NDB6 213 aa6.84□□□□□ -1.31
USP48-207ENST00000471752 ABHD4Q8TB40 342 aa6.84□□□□□ -1.31
USP48-207ENST00000471752 SLC7A13Q8TCU3 470 aa6.84□□□□□ -1.31
USP48-207ENST00000471752 CCL17Q92583 94 aa6.84□□□□□ -1.31
USP48-207ENST00000471752 HSH2DQ96JZ2 352 aa6.84□□□□□ -1.31
USP48-207ENST00000471752 TSSK2Q96PF2 358 aa6.84□□□□□ -1.31
USP48-207ENST00000471752 DCLRE1CQ96SD1 692 aaKnown RBP6.84□□□□□ -1.31
USP48-207ENST00000471752 ESM1Q9NQ30 184 aa6.84□□□□□ -1.31
USP48-207ENST00000471752 MMP26Q9NRE1 261 aa6.84□□□□□ -1.31
USP48-207ENST00000471752 IGHV1-69-2A0A0G2JMI3 117 aa6.83□□□□□ -1.32
USP48-207ENST00000471752 TRBV4-1A0A0J9YWV2 114 aa6.83□□□□□ -1.32
USP48-207ENST00000471752 IQCMA0A1B0GVH7 501 aa6.83□□□□□ -1.32
USP48-207ENST00000471752 SLC22A23A1A5C7 686 aa6.83□□□□□ -1.32
USP48-207ENST00000471752 C5orf63A6NC05 138 aa6.83□□□□□ -1.32
USP48-207ENST00000471752 EFCAB9A8MZ26 197 aa6.83□□□□□ -1.32
USP48-207ENST00000471752 H0YL77 283 aa6.83□□□□□ -1.32
USP48-207ENST00000471752 TRAPPC2LH3BP13 241 aa6.83□□□□□ -1.32
USP48-207ENST00000471752 TCF21O43680 179 aa6.83□□□□□ -1.32
USP48-207ENST00000471752 SERPINA1P01009 418 aa6.83□□□□□ -1.32
USP48-207ENST00000471752 IGHV2-5P01817 119 aa6.83□□□□□ -1.32
USP48-207ENST00000471752 IGHMP01871 453 aa6.83□□□□□ -1.32
USP48-207ENST00000471752 ERCC1P07992 297 aaPredicted RBP6.83□□□□□ -1.32
USP48-207ENST00000471752 CST2P09228 141 aa6.83□□□□□ -1.32
USP48-207ENST00000471752 CDKN2AP42771 156 aaKnown RBP6.83□□□□□ -1.32
USP48-207ENST00000471752 RAD52P43351 418 aa6.83□□□□□ -1.32
USP48-207ENST00000471752 GDI2P50395 445 aaKnown RBP6.83□□□□□ -1.32
USP48-207ENST00000471752 DAP3P51398 398 aaKnown RBP6.83□□□□□ -1.32
USP48-207ENST00000471752 ZNF81P51508 661 aa6.83□□□□□ -1.32
USP48-207ENST00000471752 PPP1CBP62140 327 aa6.83□□□□□ -1.32
USP48-207ENST00000471752 RPS23P62266 143 aaKnown RBP6.83□□□□□ -1.32
USP48-207ENST00000471752 LCN2P80188 198 aa6.83□□□□□ -1.32
USP48-207ENST00000471752 PLP2Q04941 152 aa6.83□□□□□ -1.32
USP48-207ENST00000471752 CCDC92Q53HC0 331 aaPredicted RBP6.83□□□□□ -1.32
USP48-207ENST00000471752 C1orf94Q6P1W5 598 aa6.83□□□□□ -1.32
USP48-207ENST00000471752 CBLL1Q75N03 491 aa6.83□□□□□ -1.32
USP48-207ENST00000471752 FAM122BQ7Z309 247 aa6.83□□□□□ -1.32
USP48-207ENST00000471752 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.83□□□□□ -1.32
USP48-207ENST00000471752 NAA40Q86UY6 237 aa6.83□□□□□ -1.32
USP48-207ENST00000471752 GLCCI1Q86VQ1 547 aa6.83□□□□□ -1.32
USP48-207ENST00000471752 JAZF1Q86VZ6 243 aa6.83□□□□□ -1.32
USP48-207ENST00000471752 SEMA6DQ8NFY4 1073 aa6.83□□□□□ -1.32
USP48-207ENST00000471752 OR52J3Q8NH60 311 aa6.83□□□□□ -1.32
USP48-207ENST00000471752 ZNRF4Q8WWF5 429 aa6.83□□□□□ -1.32
USP48-207ENST00000471752 FAM46AQ96IP4 442 aaKnown RBP6.83□□□□□ -1.32
USP48-207ENST00000471752 C7orf34Q96L11 122 aa6.83□□□□□ -1.32
USP48-207ENST00000471752 C4orf45Q96LM5 186 aa6.83□□□□□ -1.32
USP48-207ENST00000471752 PRRC1Q96M27 445 aa6.83□□□□□ -1.32
USP48-207ENST00000471752 RBP7Q96R05 134 aa6.83□□□□□ -1.32
USP48-207ENST00000471752 SIKE1Q9BRV8 207 aa6.83□□□□□ -1.32
USP48-207ENST00000471752 FNDC11Q9BVV2 318 aa6.83□□□□□ -1.32
USP48-207ENST00000471752 RERGLQ9H628 205 aa6.83□□□□□ -1.32
USP48-207ENST00000471752 NMNAT1Q9HAN9 279 aaPredicted RBP6.83□□□□□ -1.32
USP48-207ENST00000471752 CCNB1IP1Q9NPC3 277 aa6.83□□□□□ -1.32
USP48-207ENST00000471752 POLE4Q9NR33 117 aa6.83□□□□□ -1.32
USP48-207ENST00000471752 EGFL7Q9UHF1 273 aa6.83□□□□□ -1.32
USP48-207ENST00000471752 COA3Q9Y2R0 106 aaPredicted RBP6.83□□□□□ -1.32
USP48-207ENST00000471752 TIMM10BQ9Y5J6 103 aa6.83□□□□□ -1.32
USP48-207ENST00000471752 CAPN7Q9Y6W3 813 aa6.83□□□□□ -1.32
USP48-207ENST00000471752 NOTCH1P46531 2555 aa6.83□□□□□ -1.32
USP48-207ENST00000471752 TEX13CA0A0J9YWL9 993 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 RER1O15258 196 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 GPR37O15354 613 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 TPD52L2O43399 206 aaKnown RBP6.82□□□□□ -1.32
USP48-207ENST00000471752 NPPAP01160 153 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 IGF2P01344 180 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 TROVE2P10155 538 aaKnown RBP eCLIP6.82□□□□□ -1.32
USP48-207ENST00000471752 THRBP10828 461 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 HNF1AP20823 631 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 CFPP27918 469 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 LSP1P33241 339 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 PMELP40967 661 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 GYS2P54840 703 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 MRPS11P82912 194 aaKnown RBP6.82□□□□□ -1.32
USP48-207ENST00000471752 ST3GAL3Q11203 375 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 TRAM2Q15035 370 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 NRN1LQ496H8 165 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 FAM201AQ5SY85 155 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 MBNL2Q5VZF2 373 aaKnown RBP6.82□□□□□ -1.32
USP48-207ENST00000471752 ERICH5Q6P6B1 374 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 CORO6Q6QEF8 472 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 ZNF730Q6ZMV8 503 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 MBOAT2Q6ZWT7 520 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 VASH1Q7L8A9 365 aaPredicted RBP6.82□□□□□ -1.32
USP48-207ENST00000471752 OAFQ86UD1 273 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 OFCC1Q8IZS5 231 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 OR5AS1Q8N127 324 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 BCL6BQ8N143 479 aaPredicted RBP6.82□□□□□ -1.32
USP48-207ENST00000471752 RFLNBQ8N5W9 214 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 OR1J2Q8NGS2 313 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 RASSF5Q8WWW0 418 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 CMBLQ96DG6 245 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 SLC6A7Q99884 636 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 SH3GL1Q99961 368 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 FUZQ9BT04 418 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 ALG12Q9BV10 488 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 BCL2L14Q9BZR8 327 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 MYLK2Q9H1R3 596 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms