RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 CENPNQ96H22 339 aaPredicted RBP13.23□□□□□ -0.29
SDC3-203ENST00000471567 TSSK2Q96PF2 358 aa13.23□□□□□ -0.29
SDC3-203ENST00000471567 GSX2Q9BZM3 304 aa13.23□□□□□ -0.29
SDC3-203ENST00000471567 OR2H1Q9GZK4 316 aa13.23□□□□□ -0.29
SDC3-203ENST00000471567 SNAP29O95721 258 aa13.22□□□□□ -0.29
SDC3-203ENST00000471567 APLNRP35414 380 aa13.22□□□□□ -0.29
SDC3-203ENST00000471567 GALK2Q01415 458 aa13.22□□□□□ -0.29
SDC3-203ENST00000471567 SCRN3Q0VDG4 424 aa13.22□□□□□ -0.29
SDC3-203ENST00000471567 AQP6Q13520 282 aa13.22□□□□□ -0.29
SDC3-203ENST00000471567 DAG1Q14118 895 aa13.22□□□□□ -0.29
SDC3-203ENST00000471567 SLC27A4Q6P1M0 643 aa13.22□□□□□ -0.29
SDC3-203ENST00000471567 UGT2A3Q6UWM9 527 aa13.22□□□□□ -0.29
SDC3-203ENST00000471567 SPNS3Q6ZMD2 512 aa13.22□□□□□ -0.29
SDC3-203ENST00000471567 AMIGO2Q86SJ2 522 aa13.22□□□□□ -0.29
SDC3-203ENST00000471567 PARP8Q8N3A8 854 aa13.22□□□□□ -0.29
SDC3-203ENST00000471567 SLC37A3Q8NCC5 494 aa13.22□□□□□ -0.29
SDC3-203ENST00000471567 CPEB3Q8NE35 698 aaKnown RBP13.22□□□□□ -0.29
SDC3-203ENST00000471567 OR2T4Q8NH00 348 aa13.22□□□□□ -0.29
SDC3-203ENST00000471567 PYDC1Q8WXC3 89 aa13.22□□□□□ -0.29
SDC3-203ENST00000471567 C11orf40Q8WZ69 217 aa13.22□□□□□ -0.29
SDC3-203ENST00000471567 GABARAPL1Q9H0R8 117 aa13.22□□□□□ -0.29
SDC3-203ENST00000471567 WNT5BQ9H1J7 359 aa13.22□□□□□ -0.29
SDC3-203ENST00000471567 CDH20Q9HBT6 801 aa13.22□□□□□ -0.29
SDC3-203ENST00000471567 EMC7Q9NPA0 242 aa13.22□□□□□ -0.29
SDC3-203ENST00000471567 PAPOLBQ9NRJ5 636 aaKnown RBP13.22□□□□□ -0.29
SDC3-203ENST00000471567 CMC2Q9NRP2 79 aa13.22□□□□□ -0.29
SDC3-203ENST00000471567 KIF17Q9P2E2 1029 aa13.22□□□□□ -0.29
SDC3-203ENST00000471567 RIIAD1A6NNX1 92 aa13.21□□□□□ -0.29
SDC3-203ENST00000471567 MPZL1O95297 269 aa13.21□□□□□ -0.29
SDC3-203ENST00000471567 HMGN1P05114 100 aa13.21□□□□□ -0.29
SDC3-203ENST00000471567 GAAP10253 952 aa13.21□□□□□ -0.29
SDC3-203ENST00000471567 COX5BP10606 129 aa13.21□□□□□ -0.29
SDC3-203ENST00000471567 BMP4P12644 408 aa13.21□□□□□ -0.29
SDC3-203ENST00000471567 ZNF23P17027 643 aa13.21□□□□□ -0.29
SDC3-203ENST00000471567 STOMP27105 288 aa13.21□□□□□ -0.29
SDC3-203ENST00000471567 APEX1P27695 318 aaKnown RBP13.21□□□□□ -0.29
SDC3-203ENST00000471567 POU1F1P28069 291 aa13.21□□□□□ -0.29
SDC3-203ENST00000471567 PCSK6P29122 969 aa13.21□□□□□ -0.29
SDC3-203ENST00000471567 GLRXP35754 106 aa13.21□□□□□ -0.29
SDC3-203ENST00000471567 SERPINF1P36955 418 aa13.21□□□□□ -0.29
SDC3-203ENST00000471567 PTH2RP49190 550 aa13.21□□□□□ -0.29
SDC3-203ENST00000471567 CENPAP49450 140 aa13.21□□□□□ -0.29
SDC3-203ENST00000471567 DAPP51397 102 aa13.21□□□□□ -0.29
SDC3-203ENST00000471567 SLC25A1P53007 311 aa13.21□□□□□ -0.29
SDC3-203ENST00000471567 RPS23P62266 143 aaKnown RBP13.21□□□□□ -0.29
SDC3-203ENST00000471567 CDK5Q00535 292 aa13.21□□□□□ -0.29
SDC3-203ENST00000471567 GABPB1Q06547 395 aaPredicted RBP13.21□□□□□ -0.29
SDC3-203ENST00000471567 SNTB2Q13425 540 aaKnown RBP13.21□□□□□ -0.29
SDC3-203ENST00000471567 GINS1Q14691 196 aa13.21□□□□□ -0.29
SDC3-203ENST00000471567 ADIPOQQ15848 244 aa13.21□□□□□ -0.29
SDC3-203ENST00000471567 C11orf71Q6IPW1 123 aa13.21□□□□□ -0.29
SDC3-203ENST00000471567 CYB561A3Q8NBI2 242 aa13.21□□□□□ -0.29
SDC3-203ENST00000471567 SLC26A10Q8NG04 563 aa13.21□□□□□ -0.29
SDC3-203ENST00000471567 AKR7LQ8NHP1 331 aa13.21□□□□□ -0.29
SDC3-203ENST00000471567 TRMT61AQ96FX7 289 aaKnown RBP13.21□□□□□ -0.29
SDC3-203ENST00000471567 FOXN4Q96NZ1 517 aa13.21□□□□□ -0.29
SDC3-203ENST00000471567 RBM4Q9BWF3 364 aaKnown RBP13.21□□□□□ -0.29
SDC3-203ENST00000471567 OSBPL10Q9BXB5 764 aa13.21□□□□□ -0.29
SDC3-203ENST00000471567 TEX12Q9BXU0 123 aa13.21□□□□□ -0.29
SDC3-203ENST00000471567 NMNAT2Q9BZQ4 307 aa13.21□□□□□ -0.29
SDC3-203ENST00000471567 FBXO9Q9UK97 447 aaPredicted RBP13.21□□□□□ -0.29
SDC3-203ENST00000471567 B9A039 149 aa13.2□□□□□ -0.3
SDC3-203ENST00000471567 OR4A8P0C604 315 aa13.2□□□□□ -0.3
SDC3-203ENST00000471567 ZNF3P17036 446 aa13.2□□□□□ -0.3
SDC3-203ENST00000471567 THBS4P35443 961 aa13.2□□□□□ -0.3
SDC3-203ENST00000471567 GDI2P50395 445 aaKnown RBP13.2□□□□□ -0.3
SDC3-203ENST00000471567 ESRRGP62508 458 aa13.2□□□□□ -0.3
SDC3-203ENST00000471567 CRMP1Q14194 572 aa13.2□□□□□ -0.3
SDC3-203ENST00000471567 EFNB3Q15768 340 aa13.2□□□□□ -0.3
SDC3-203ENST00000471567 SWI5Q1ZZU3 235 aa13.2□□□□□ -0.3
SDC3-203ENST00000471567 MST1LQ2TV78 715 aa13.2□□□□□ -0.3
SDC3-203ENST00000471567 SHEQ5VZ18 495 aa13.2□□□□□ -0.3
SDC3-203ENST00000471567 KRT80Q6KB66 452 aa13.2□□□□□ -0.3
SDC3-203ENST00000471567 ACSM5Q6NUN0 579 aa13.2□□□□□ -0.3
SDC3-203ENST00000471567 VHLLQ6RSH7 139 aa13.2□□□□□ -0.3
SDC3-203ENST00000471567 PRSS57Q6UWY2 283 aa13.2□□□□□ -0.3
SDC3-203ENST00000471567 POM121L2Q96KW2 1035 aa13.2□□□□□ -0.3
SDC3-203ENST00000471567 FN3KQ9H479 309 aa13.2□□□□□ -0.3
SDC3-203ENST00000471567 SLC25A19Q9HC21 320 aa13.2□□□□□ -0.3
SDC3-203ENST00000471567 KCNG2Q9UJ96 466 aa13.2□□□□□ -0.3
SDC3-203ENST00000471567 NDRG4Q9ULP0 352 aaKnown RBP13.2□□□□□ -0.3
SDC3-203ENST00000471567 ARID1AO14497 2285 aa13.2□□□□□ -0.3
SDC3-203ENST00000471567 PRRC2AP48634 2157 aaKnown RBP13.2□□□□□ -0.3
SDC3-203ENST00000471567 OTOGQ6ZRI0 2925 aa13.19□□□□□ -0.3
SDC3-203ENST00000471567 USF3Q68DE3 2245 aa13.19□□□□□ -0.3
SDC3-203ENST00000471567 H3BNX3 289 aa13.19□□□□□ -0.3
SDC3-203ENST00000471567 SGCEO43556 437 aa13.19□□□□□ -0.3
SDC3-203ENST00000471567 RRP9O43818 475 aaKnown RBP13.19□□□□□ -0.3
SDC3-203ENST00000471567 TFP02787 698 aa13.19□□□□□ -0.3
SDC3-203ENST00000471567 RAD52P43351 418 aa13.19□□□□□ -0.3
SDC3-203ENST00000471567 BLVRAP53004 296 aa13.19□□□□□ -0.3
SDC3-203ENST00000471567 CRISP1P54107 249 aa13.19□□□□□ -0.3
SDC3-203ENST00000471567 HIST1H3AP68431 136 aa13.19□□□□□ -0.3
SDC3-203ENST00000471567 TEKQ02763 1124 aa13.19□□□□□ -0.3
SDC3-203ENST00000471567 HIST2H3PS2Q5TEC6 136 aa13.19□□□□□ -0.3
SDC3-203ENST00000471567 KDM4DQ6B0I6 523 aa13.19□□□□□ -0.3
SDC3-203ENST00000471567 ZNF774Q6NX45 483 aa13.19□□□□□ -0.3
SDC3-203ENST00000471567 UNQ6126/PRO20091Q6UXV3 157 aa13.19□□□□□ -0.3
SDC3-203ENST00000471567 HIST2H3AQ71DI3 136 aa13.19□□□□□ -0.3
SDC3-203ENST00000471567 C1orf174Q8IYL3 243 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms