RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 RAB39BQ96DA2 213 aa11.27□□□□□ -0.61
CPSF4-210ENST00000469897 ELMOD3Q96FG2 381 aa11.27□□□□□ -0.61
CPSF4-210ENST00000469897 TIMD4Q96H15 378 aa11.27□□□□□ -0.61
CPSF4-210ENST00000469897 C4orf45Q96LM5 186 aa11.27□□□□□ -0.61
CPSF4-210ENST00000469897 FNDC11Q9BVV2 318 aa11.27□□□□□ -0.61
CPSF4-210ENST00000469897 TMPRSS13Q9BYE2 586 aa11.27□□□□□ -0.61
CPSF4-210ENST00000469897 MSL2Q9HCI7 577 aa11.27□□□□□ -0.61
CPSF4-210ENST00000469897 MAN2C1Q9NTJ4 1040 aa11.27□□□□□ -0.61
CPSF4-210ENST00000469897 MRGBPQ9NV56 204 aa11.27□□□□□ -0.61
CPSF4-210ENST00000469897 ARMCX1Q9P291 453 aa11.27□□□□□ -0.61
CPSF4-210ENST00000469897 MALRD1Q5VYJ5 2156 aa11.27□□□□□ -0.61
CPSF4-210ENST00000469897 A0A087WUU8 490 aa11.26□□□□□ -0.61
CPSF4-210ENST00000469897 GMNCA6NCL1 334 aa11.26□□□□□ -0.61
CPSF4-210ENST00000469897 A6NIZ1 184 aa11.26□□□□□ -0.61
CPSF4-210ENST00000469897 C12orf71A8MTZ7 269 aa11.26□□□□□ -0.61
CPSF4-210ENST00000469897 H7C1C5 153 aa11.26□□□□□ -0.61
CPSF4-210ENST00000469897 ZNF682O95780 498 aa11.26□□□□□ -0.61
CPSF4-210ENST00000469897 IGHV2-5P01817 119 aa11.26□□□□□ -0.61
CPSF4-210ENST00000469897 IGHMP01871 453 aa11.26□□□□□ -0.61
CPSF4-210ENST00000469897 ADRA2CP18825 462 aa11.26□□□□□ -0.61
CPSF4-210ENST00000469897 RAP1BP61224 184 aa11.26□□□□□ -0.61
CPSF4-210ENST00000469897 LCN6P62502 163 aa11.26□□□□□ -0.61
CPSF4-210ENST00000469897 RAP1AP62834 184 aa11.26□□□□□ -0.61
CPSF4-210ENST00000469897 LIPEQ05469 1076 aa11.26□□□□□ -0.61
CPSF4-210ENST00000469897 PEG10Q86TG7 708 aaKnown RBP11.26□□□□□ -0.61
CPSF4-210ENST00000469897 SLC15A3Q8IY34 581 aa11.26□□□□□ -0.61
CPSF4-210ENST00000469897 RNF113BQ8IZP6 322 aaKnown RBP11.26□□□□□ -0.61
CPSF4-210ENST00000469897 POU5F2Q8N7G0 328 aa11.26□□□□□ -0.61
CPSF4-210ENST00000469897 SEMA6DQ8NFY4 1073 aa11.26□□□□□ -0.61
CPSF4-210ENST00000469897 OR13C2Q8NGS9 318 aa11.26□□□□□ -0.61
CPSF4-210ENST00000469897 FNDC8Q8TC99 324 aa11.26□□□□□ -0.61
CPSF4-210ENST00000469897 GEMIN6Q8WXD5 167 aaKnown RBP11.26□□□□□ -0.61
CPSF4-210ENST00000469897 LZICQ8WZA0 190 aa11.26□□□□□ -0.61
CPSF4-210ENST00000469897 RCN3Q96D15 328 aa11.26□□□□□ -0.61
CPSF4-210ENST00000469897 DCLRE1CQ96SD1 692 aaKnown RBP11.26□□□□□ -0.61
CPSF4-210ENST00000469897 GAL3ST1Q99999 423 aa11.26□□□□□ -0.61
CPSF4-210ENST00000469897 EGLN1Q9GZT9 426 aa11.26□□□□□ -0.61
CPSF4-210ENST00000469897 EMC7Q9NPA0 242 aa11.26□□□□□ -0.61
CPSF4-210ENST00000469897 CYSLTR2Q9NS75 346 aa11.26□□□□□ -0.61
CPSF4-210ENST00000469897 A0A0G2JMP0 313 aa11.25□□□□□ -0.61
CPSF4-210ENST00000469897 A0A0X1KG70 313 aa11.25□□□□□ -0.61
CPSF4-210ENST00000469897 ISPDA4D126 451 aa11.25□□□□□ -0.61
CPSF4-210ENST00000469897 CDC42EP2O14613 210 aa11.25□□□□□ -0.61
CPSF4-210ENST00000469897 GSTA4O15217 222 aa11.25□□□□□ -0.61
CPSF4-210ENST00000469897 IFNW1P05000 195 aa11.25□□□□□ -0.61
CPSF4-210ENST00000469897 SBK2P0C263 348 aa11.25□□□□□ -0.61
CPSF4-210ENST00000469897 EPHA1P21709 976 aa11.25□□□□□ -0.61
CPSF4-210ENST00000469897 MSR1P21757 451 aa11.25□□□□□ -0.61
CPSF4-210ENST00000469897 CFPP27918 469 aa11.25□□□□□ -0.61
CPSF4-210ENST00000469897 RPL4P36578 427 aaKnown RBP11.25□□□□□ -0.61
CPSF4-210ENST00000469897 LIPAP38571 399 aa11.25□□□□□ -0.61
CPSF4-210ENST00000469897 ARHGDIAP52565 204 aa11.25□□□□□ -0.61
CPSF4-210ENST00000469897 LCN2P80188 198 aa11.25□□□□□ -0.61
CPSF4-210ENST00000469897 PSG7Q13046 419 aa11.25□□□□□ -0.61
CPSF4-210ENST00000469897 SCGB2A2Q13296 93 aa11.25□□□□□ -0.61
CPSF4-210ENST00000469897 DCAF12L2Q5VW00 463 aa11.25□□□□□ -0.61
CPSF4-210ENST00000469897 OTPQ5XKR4 325 aa11.25□□□□□ -0.61
CPSF4-210ENST00000469897 FAM205BPQ63HN1 556 aa11.25□□□□□ -0.61
CPSF4-210ENST00000469897 ARL9Q6T311 187 aa11.25□□□□□ -0.61
CPSF4-210ENST00000469897 ZNF730Q6ZMV8 503 aa11.25□□□□□ -0.61
CPSF4-210ENST00000469897 FOXL2NBQ6ZUU3 175 aa11.25□□□□□ -0.61
CPSF4-210ENST00000469897 FKBP9P1Q75LS8 142 aa11.25□□□□□ -0.61
CPSF4-210ENST00000469897 C1orf174Q8IYL3 243 aa11.25□□□□□ -0.61
CPSF4-210ENST00000469897 OR4M2Q8NGB6 313 aa11.25□□□□□ -0.61
CPSF4-210ENST00000469897 RP9Q8TA86 221 aaKnown RBP11.25□□□□□ -0.61
CPSF4-210ENST00000469897 ZFAND2BQ8WV99 257 aa11.25□□□□□ -0.61
CPSF4-210ENST00000469897 C7orf69Q9H7B7 122 aa11.25□□□□□ -0.61
CPSF4-210ENST00000469897 ELOVL3Q9HB03 270 aa11.25□□□□□ -0.61
CPSF4-210ENST00000469897 POLE4Q9NR33 117 aa11.25□□□□□ -0.61
CPSF4-210ENST00000469897 DCAF16Q9NXF7 216 aa11.25□□□□□ -0.61
CPSF4-210ENST00000469897 UBAP1Q9NZ09 502 aa11.25□□□□□ -0.61
CPSF4-210ENST00000469897 GRHPRQ9UBQ7 328 aa11.25□□□□□ -0.61
CPSF4-210ENST00000469897 ZDHHC8Q9ULC8 765 aa11.25□□□□□ -0.61
CPSF4-210ENST00000469897 ADAM18Q9Y3Q7 739 aa11.25□□□□□ -0.61
CPSF4-210ENST00000469897 CAPN7Q9Y6W3 813 aa11.25□□□□□ -0.61
CPSF4-210ENST00000469897 CXCR6O00574 342 aa11.24□□□□□ -0.61
CPSF4-210ENST00000469897 ICMTO60725 284 aa11.24□□□□□ -0.61
CPSF4-210ENST00000469897 ZNF26P17031 533 aaPredicted RBP11.24□□□□□ -0.61
CPSF4-210ENST00000469897 ZFP36P26651 326 aaKnown RBP11.24□□□□□ -0.61
CPSF4-210ENST00000469897 GPR4P46093 362 aa11.24□□□□□ -0.61
CPSF4-210ENST00000469897 HILS1P60008 231 aa11.24□□□□□ -0.61
CPSF4-210ENST00000469897 TNFAIP6P98066 277 aaPredicted RBP11.24□□□□□ -0.61
CPSF4-210ENST00000469897 SLC3A1Q07837 685 aa11.24□□□□□ -0.61
CPSF4-210ENST00000469897 ANKDD1AQ495B1 522 aa11.24□□□□□ -0.61
CPSF4-210ENST00000469897 ZBED5Q49AG3 693 aa11.24□□□□□ -0.61
CPSF4-210ENST00000469897 MTX3Q5HYI7 312 aa11.24□□□□□ -0.61
CPSF4-210ENST00000469897 TMPRSS11FQ6ZWK6 438 aa11.24□□□□□ -0.61
CPSF4-210ENST00000469897 MBOAT2Q6ZWT7 520 aa11.24□□□□□ -0.61
CPSF4-210ENST00000469897 RRM2BQ7LG56 351 aa11.24□□□□□ -0.61
CPSF4-210ENST00000469897 SYT9Q86SS6 491 aa11.24□□□□□ -0.61
CPSF4-210ENST00000469897 OFCC1Q8IZS5 231 aa11.24□□□□□ -0.61
CPSF4-210ENST00000469897 TEX29Q8N6K0 151 aa11.24□□□□□ -0.61
CPSF4-210ENST00000469897 NANPQ8TBE9 248 aa11.24□□□□□ -0.61
CPSF4-210ENST00000469897 ACOT11Q8WXI4 607 aaPredicted RBP11.24□□□□□ -0.61
CPSF4-210ENST00000469897 GCDHQ92947 438 aaPredicted RBP11.24□□□□□ -0.61
CPSF4-210ENST00000469897 CMBLQ96DG6 245 aa11.24□□□□□ -0.61
CPSF4-210ENST00000469897 Q96M85 177 aa11.24□□□□□ -0.61
CPSF4-210ENST00000469897 DIRC2Q96SL1 478 aa11.24□□□□□ -0.61
CPSF4-210ENST00000469897 POFUT1Q9H488 388 aa11.24□□□□□ -0.61
CPSF4-210ENST00000469897 RERGLQ9H628 205 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms