RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 PSMB1P20618 241 aaKnown RBP7.13□□□□□ -1.27
HDAC6-216ENST00000468949 SLC2A5P22732 501 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 ZNF133P52736 654 aaPredicted RBP7.13□□□□□ -1.27
HDAC6-216ENST00000468949 LSM6P62312 80 aaKnown RBP7.13□□□□□ -1.27
HDAC6-216ENST00000468949 PLP2Q04941 152 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 RAB40BQ12829 278 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 AQP6Q13520 282 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 EIF2B1Q14232 305 aaKnown RBP7.13□□□□□ -1.27
HDAC6-216ENST00000468949 TAF13Q15543 124 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 MEP1BQ16820 701 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 TBRG1Q3YBR2 411 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 C6orf141Q5SZD1 244 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 ZNF362Q5T0B9 420 aaPredicted RBP7.13□□□□□ -1.27
HDAC6-216ENST00000468949 SFRP5Q5T4F7 317 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 SLC18B1Q6NT16 456 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 ZNF474Q6S9Z5 364 aaPredicted RBP7.13□□□□□ -1.27
HDAC6-216ENST00000468949 AHSA2Q719I0 299 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 LINGO2Q7L985 606 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 SSX8Q7RTT4 187 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 SLC16A9Q7RTY1 509 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 FAM220AQ7Z4H9 259 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 LIX1LQ8IVB5 337 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 SLC35F2Q8IXU6 374 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 GABRG1Q8N1C3 465 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 ZNF433Q8N7K0 673 aaPredicted RBP7.13□□□□□ -1.27
HDAC6-216ENST00000468949 SLC26A10Q8NG04 563 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 LILRB4Q8NHJ6 448 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 APH1BQ8WW43 257 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 C11orf40Q8WZ69 217 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 RNASE6Q93091 150 aaKnown RBP7.13□□□□□ -1.27
HDAC6-216ENST00000468949 PTP4A1Q93096 173 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 MYDGFQ969H8 173 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 NMD3Q96D46 503 aaKnown RBP7.13□□□□□ -1.27
HDAC6-216ENST00000468949 MNTQ99583 582 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 TEAD3Q99594 435 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 KCNS3Q9BQ31 491 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 MED18Q9BUE0 208 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 ACTR6Q9GZN1 396 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 CCDC90BQ9GZT6 254 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 WDR76Q9H967 626 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 AMBNQ9NP70 447 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 EMC7Q9NPA0 242 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 OBP2BQ9NPH6 170 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 ASH2LQ9UBL3 628 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 AASSQ9UDR5 926 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 FBXL3Q9UKT7 428 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 SNX5Q9Y5X3 404 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 SPTAN1Q13813 2472 aaKnown RBP7.13□□□□□ -1.27
HDAC6-216ENST00000468949 SPTBN1Q01082 2364 aaKnown RBP7.12□□□□□ -1.27
HDAC6-216ENST00000468949 POLEQ07864 2286 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 GTF3C1Q12789 2109 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 ZGRF1Q86YA3 2104 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 ARHGAP21Q5T5U3 1957 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 IQCMA0A1B0GVH7 501 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 DAPL1A0PJW8 107 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 PTGES3LE9PB15 166 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 ZNF593O00488 134 aaPredicted RBP7.12□□□□□ -1.27
HDAC6-216ENST00000468949 MYL12BO14950 172 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 XPNPEP2O43895 674 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 DOK2O60496 412 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 WBP4O75554 376 aaKnown RBP7.12□□□□□ -1.27
HDAC6-216ENST00000468949 TNFAIP8O95379 198 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 CLDN1O95832 211 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 GPANK1O95872 356 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 PTHP01270 115 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 LYNP07948 512 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 CST2P09228 141 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 CCDC159P0C7I6 412 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 GAAP10253 952 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 PPP3CBP16298 524 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 GABRB1P18505 474 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 PAX7P23759 505 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 HSD11B1P28845 292 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 UGT2B10P36537 528 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 ARR3P36575 388 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 PEX19P40855 299 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 CHN2P52757 468 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 CXCR4P61073 352 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 ACTA2P62736 377 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 ACTG2P63267 376 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 EFNB1P98172 346 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 GGTLC2Q14390 218 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 PPA1Q15181 289 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 TSC22D1Q15714 1073 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 SMN1Q16637 294 aaKnown RBP7.12□□□□□ -1.27
HDAC6-216ENST00000468949 GSG1Q2KHT4 349 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 HIKESHIQ53FT3 197 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 TMEM154Q6P9G4 183 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 LYPD4Q6UWN0 246 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 B3GLCTQ6Y288 498 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 STAC2Q6ZMT1 411 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 P2RY8Q86VZ1 359 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.12□□□□□ -1.27
HDAC6-216ENST00000468949 LINC00346Q8IVM7 164 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 ALDH16A1Q8IZ83 802 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 GJC3Q8NFK1 279 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 OR52N5Q8NH56 324 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 THEM6Q8WUY1 208 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 SNX33Q8WV41 574 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 IPCEF1Q8WWN9 437 aaPredicted RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms