RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 LOC105371242A0A075B767 164 aa20.77■□□□□ 0.92
PTCH1-210ENST00000468211 A0A087WUU8 490 aa20.77■□□□□ 0.92
PTCH1-210ENST00000468211 HTR3EA5X5Y0 456 aa20.77■□□□□ 0.92
PTCH1-210ENST00000468211 GMNCA6NCL1 334 aa20.77■□□□□ 0.92
PTCH1-210ENST00000468211 CLDN25C9JDP6 229 aa20.77■□□□□ 0.92
PTCH1-210ENST00000468211 CDC42EP2O14613 210 aa20.77■□□□□ 0.92
PTCH1-210ENST00000468211 ICMTO60725 284 aa20.77■□□□□ 0.92
PTCH1-210ENST00000468211 PNPP00491 289 aa20.77■□□□□ 0.92
PTCH1-210ENST00000468211 IGHV2-5P01817 119 aa20.77■□□□□ 0.92
PTCH1-210ENST00000468211 MT-ND5P03915 603 aa20.77■□□□□ 0.92
PTCH1-210ENST00000468211 IFNW1P05000 195 aa20.77■□□□□ 0.92
PTCH1-210ENST00000468211 GUCY1A3Q02108 690 aa20.77■□□□□ 0.92
PTCH1-210ENST00000468211 LIPEQ05469 1076 aa20.77■□□□□ 0.92
PTCH1-210ENST00000468211 HFEQ30201 348 aa20.77■□□□□ 0.92
PTCH1-210ENST00000468211 SHQ1Q6PI26 577 aaKnown RBP20.77■□□□□ 0.92
PTCH1-210ENST00000468211 ZNF771Q7L3S4 317 aaPredicted RBP20.77■□□□□ 0.92
PTCH1-210ENST00000468211 TSEN54Q7Z6J9 526 aaKnown RBP20.77■□□□□ 0.92
PTCH1-210ENST00000468211 OAFQ86UD1 273 aa20.77■□□□□ 0.92
PTCH1-210ENST00000468211 LZICQ8WZA0 190 aa20.77■□□□□ 0.92
PTCH1-210ENST00000468211 EMC7Q9NPA0 242 aa20.77■□□□□ 0.92
PTCH1-210ENST00000468211 KLHL21Q9UJP4 597 aa20.77■□□□□ 0.92
PTCH1-210ENST00000468211 ADAM18Q9Y3Q7 739 aa20.77■□□□□ 0.92
PTCH1-210ENST00000468211 CXCR6O00574 342 aa20.76■□□□□ 0.91
PTCH1-210ENST00000468211 NME4O00746 187 aa20.76■□□□□ 0.91
PTCH1-210ENST00000468211 UBOX5O94941 541 aa20.76■□□□□ 0.91
PTCH1-210ENST00000468211 ZNF682O95780 498 aa20.76■□□□□ 0.91
PTCH1-210ENST00000468211 MSR1P21757 451 aa20.76■□□□□ 0.91
PTCH1-210ENST00000468211 IFNA8P32881 189 aa20.76■□□□□ 0.91
PTCH1-210ENST00000468211 GPR4P46093 362 aa20.76■□□□□ 0.91
PTCH1-210ENST00000468211 FAM209AQ5JX71 171 aa20.76■□□□□ 0.91
PTCH1-210ENST00000468211 FAM205BPQ63HN1 556 aa20.76■□□□□ 0.91
PTCH1-210ENST00000468211 ALDH16A1Q8IZ83 802 aa20.76■□□□□ 0.91
PTCH1-210ENST00000468211 FNDC8Q8TC99 324 aa20.76■□□□□ 0.91
PTCH1-210ENST00000468211 CCL17Q92583 94 aa20.76■□□□□ 0.91
PTCH1-210ENST00000468211 ELMOD3Q96FG2 381 aa20.76■□□□□ 0.91
PTCH1-210ENST00000468211 TMPRSS13Q9BYE2 586 aa20.76■□□□□ 0.91
PTCH1-210ENST00000468211 POFUT1Q9H488 388 aa20.76■□□□□ 0.91
PTCH1-210ENST00000468211 POLE4Q9NR33 117 aa20.76■□□□□ 0.91
PTCH1-210ENST00000468211 A6NIZ1 184 aa20.75■□□□□ 0.91
PTCH1-210ENST00000468211 RAP1BP61224 184 aa20.75■□□□□ 0.91
PTCH1-210ENST00000468211 RAP1AP62834 184 aa20.75■□□□□ 0.91
PTCH1-210ENST00000468211 OTPQ5XKR4 325 aa20.75■□□□□ 0.91
PTCH1-210ENST00000468211 GEMIN6Q8WXD5 167 aaKnown RBP20.75■□□□□ 0.91
PTCH1-210ENST00000468211 ACOT11Q8WXI4 607 aaPredicted RBP20.75■□□□□ 0.91
PTCH1-210ENST00000468211 RAB39BQ96DA2 213 aa20.75■□□□□ 0.91
PTCH1-210ENST00000468211 C4orf45Q96LM5 186 aa20.75■□□□□ 0.91
PTCH1-210ENST00000468211 Q96M85 177 aa20.75■□□□□ 0.91
PTCH1-210ENST00000468211 MSL2Q9HCI7 577 aa20.75■□□□□ 0.91
PTCH1-210ENST00000468211 ZNF446Q9NWS9 450 aa20.75■□□□□ 0.91
PTCH1-210ENST00000468211 DCAF16Q9NXF7 216 aa20.75■□□□□ 0.91
PTCH1-210ENST00000468211 A0A0A6YYJ9 748 aa20.74■□□□□ 0.91
PTCH1-210ENST00000468211 PLSCR5A0PG75 271 aa20.74■□□□□ 0.91
PTCH1-210ENST00000468211 SLC22A2O15244 555 aa20.74■□□□□ 0.91
PTCH1-210ENST00000468211 ADH4P08319 380 aa20.74■□□□□ 0.91
PTCH1-210ENST00000468211 COX4I1P13073 169 aa20.74■□□□□ 0.91
PTCH1-210ENST00000468211 ANPEPP15144 967 aa20.74■□□□□ 0.91
PTCH1-210ENST00000468211 SLC7A2P52569 658 aa20.74■□□□□ 0.91
PTCH1-210ENST00000468211 PCBD1P61457 104 aa20.74■□□□□ 0.91
PTCH1-210ENST00000468211 IFI44LQ53G44 452 aa20.74■□□□□ 0.91
PTCH1-210ENST00000468211 MESTQ5EB52 335 aa20.74■□□□□ 0.91
PTCH1-210ENST00000468211 ZNF730Q6ZMV8 503 aa20.74■□□□□ 0.91
PTCH1-210ENST00000468211 MBOAT2Q6ZWT7 520 aa20.74■□□□□ 0.91
PTCH1-210ENST00000468211 CBLL1Q75N03 491 aa20.74■□□□□ 0.91
PTCH1-210ENST00000468211 RP9Q8TA86 221 aaKnown RBP20.74■□□□□ 0.91
PTCH1-210ENST00000468211 RAB1CQ92928 201 aa20.74■□□□□ 0.91
PTCH1-210ENST00000468211 HSH2DQ96JZ2 352 aa20.74■□□□□ 0.91
PTCH1-210ENST00000468211 ADRA2CP18825 462 aa20.73■□□□□ 0.91
PTCH1-210ENST00000468211 EPHA1P21709 976 aa20.73■□□□□ 0.91
PTCH1-210ENST00000468211 SLC9A3P48764 834 aa20.73■□□□□ 0.91
PTCH1-210ENST00000468211 PSG7Q13046 419 aa20.73■□□□□ 0.91
PTCH1-210ENST00000468211 ANKDD1AQ495B1 522 aa20.73■□□□□ 0.91
PTCH1-210ENST00000468211 C8orf82Q6P1X6 216 aaPredicted RBP20.73■□□□□ 0.91
PTCH1-210ENST00000468211 UNQ6126/PRO20091Q6UXV3 157 aa20.73■□□□□ 0.91
PTCH1-210ENST00000468211 TMPRSS11FQ6ZWK6 438 aa20.73■□□□□ 0.91
PTCH1-210ENST00000468211 FAM122BQ7Z309 247 aa20.73■□□□□ 0.91
PTCH1-210ENST00000468211 RNF113BQ8IZP6 322 aaKnown RBP20.73■□□□□ 0.91
PTCH1-210ENST00000468211 TIMD4Q96H15 378 aa20.73■□□□□ 0.91
PTCH1-210ENST00000468211 C12orf71A8MTZ7 269 aa20.72■□□□□ 0.91
PTCH1-210ENST00000468211 IMPA2O14732 288 aa20.72■□□□□ 0.91
PTCH1-210ENST00000468211 SERPINA1P01009 418 aa20.72■□□□□ 0.91
PTCH1-210ENST00000468211 RPL4P36578 427 aaKnown RBP20.72■□□□□ 0.91
PTCH1-210ENST00000468211 GUCA1AP43080 201 aaPredicted RBP20.72■□□□□ 0.91
PTCH1-210ENST00000468211 GSK3BP49841 420 aa20.72■□□□□ 0.91
PTCH1-210ENST00000468211 FKBP9P1Q75LS8 142 aa20.72■□□□□ 0.91
PTCH1-210ENST00000468211 ARPINQ7Z6K5 226 aa20.72■□□□□ 0.91
PTCH1-210ENST00000468211 SYT9Q86SS6 491 aa20.72■□□□□ 0.91
PTCH1-210ENST00000468211 TREML1Q86YW5 311 aa20.72■□□□□ 0.91
PTCH1-210ENST00000468211 GAL3ST1Q99999 423 aa20.72■□□□□ 0.91
PTCH1-210ENST00000468211 CCDC134Q9H6E4 229 aa20.72■□□□□ 0.91
PTCH1-210ENST00000468211 ELOVL3Q9HB03 270 aa20.72■□□□□ 0.91
PTCH1-210ENST00000468211 CYSLTR2Q9NS75 346 aa20.72■□□□□ 0.91
PTCH1-210ENST00000468211 GRHPRQ9UBQ7 328 aa20.72■□□□□ 0.91
PTCH1-210ENST00000468211 AP3M1Q9Y2T2 418 aa20.72■□□□□ 0.91
PTCH1-210ENST00000468211 A0A0G2JMP0 313 aa20.71■□□□□ 0.91
PTCH1-210ENST00000468211 A0A0X1KG70 313 aa20.71■□□□□ 0.91
PTCH1-210ENST00000468211 H3BSA7 217 aa20.71■□□□□ 0.91
PTCH1-210ENST00000468211 GSTA4O15217 222 aa20.71■□□□□ 0.91
PTCH1-210ENST00000468211 CD55P08174 381 aa20.71■□□□□ 0.91
PTCH1-210ENST00000468211 CD14P08571 375 aa20.71■□□□□ 0.91
PTCH1-210ENST00000468211 NCK1P16333 377 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms