RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 KRCC1Q9NPI7 259 aaPredicted RBP16.35■□□□□ 0.21
COL7A1-207ENST00000467985 HINT3Q9NQE9 182 aaKnown RBP16.35■□□□□ 0.21
COL7A1-207ENST00000467985 NDUFAF4Q9P032 175 aa16.35■□□□□ 0.21
COL7A1-207ENST00000467985 TAAR3PQ9P1P4 343 aa16.35■□□□□ 0.21
COL7A1-207ENST00000467985 CD300AQ9UGN4 299 aa16.35■□□□□ 0.21
COL7A1-207ENST00000467985 TIMM10BQ9Y5J6 103 aa16.35■□□□□ 0.21
COL7A1-207ENST00000467985 C12orf71A8MTZ7 269 aa16.34■□□□□ 0.21
COL7A1-207ENST00000467985 CDC42EP2O14613 210 aa16.34■□□□□ 0.21
COL7A1-207ENST00000467985 HPXP02790 462 aa16.34■□□□□ 0.21
COL7A1-207ENST00000467985 NAT2P11245 290 aa16.34■□□□□ 0.21
COL7A1-207ENST00000467985 ITGA2P17301 1181 aa16.34■□□□□ 0.21
COL7A1-207ENST00000467985 MSR1P21757 451 aa16.34■□□□□ 0.21
COL7A1-207ENST00000467985 CCNOP22674 350 aa16.34■□□□□ 0.21
COL7A1-207ENST00000467985 LAP3P28838 519 aa16.34■□□□□ 0.21
COL7A1-207ENST00000467985 MSX2P35548 267 aaPredicted RBP16.34■□□□□ 0.21
COL7A1-207ENST00000467985 TMEM33P57088 247 aa16.34■□□□□ 0.21
COL7A1-207ENST00000467985 PSG4Q00888 419 aa16.34■□□□□ 0.21
COL7A1-207ENST00000467985 CXXC5Q7LFL8 322 aaKnown RBP16.34■□□□□ 0.21
COL7A1-207ENST00000467985 CLDN22Q8N7P3 220 aa16.34■□□□□ 0.21
COL7A1-207ENST00000467985 POM121L2Q96KW2 1035 aa16.34■□□□□ 0.21
COL7A1-207ENST00000467985 SNX18Q96RF0 628 aa16.34■□□□□ 0.21
COL7A1-207ENST00000467985 ZNF416Q9BWM5 594 aa16.34■□□□□ 0.21
COL7A1-207ENST00000467985 OR2H1Q9GZK4 316 aa16.34■□□□□ 0.21
COL7A1-207ENST00000467985 MMADHCQ9H3L0 296 aaPredicted RBP16.34■□□□□ 0.21
COL7A1-207ENST00000467985 MUC13Q9H3R2 512 aa16.34■□□□□ 0.21
COL7A1-207ENST00000467985 GORASP2Q9H8Y8 452 aa16.34■□□□□ 0.21
COL7A1-207ENST00000467985 A0A1W2PPL8 197 aa16.33■□□□□ 0.2
COL7A1-207ENST00000467985 C5orf49A4QMS7 147 aa16.33■□□□□ 0.2
COL7A1-207ENST00000467985 LRP5LA4QPB2 252 aa16.33■□□□□ 0.2
COL7A1-207ENST00000467985 C17orf100A8MU93 164 aa16.33■□□□□ 0.2
COL7A1-207ENST00000467985 LYNX1G3V0Z9 82 aa16.33■□□□□ 0.2
COL7A1-207ENST00000467985 CIB2O75838 187 aa16.33■□□□□ 0.2
COL7A1-207ENST00000467985 NDUFB2O95178 105 aa16.33■□□□□ 0.2
COL7A1-207ENST00000467985 CLPTM1O96005 669 aa16.33■□□□□ 0.2
COL7A1-207ENST00000467985 IGHV3-13P01766 116 aa16.33■□□□□ 0.2
COL7A1-207ENST00000467985 LYNX1P0DP58 116 aa16.33■□□□□ 0.2
COL7A1-207ENST00000467985 IGFBP5P24593 272 aa16.33■□□□□ 0.2
COL7A1-207ENST00000467985 THBS2P35442 1172 aa16.33■□□□□ 0.2
COL7A1-207ENST00000467985 GPR6P46095 362 aaPredicted RBP16.33■□□□□ 0.2
COL7A1-207ENST00000467985 FGD3Q5JSP0 725 aa16.33■□□□□ 0.2
COL7A1-207ENST00000467985 ARL9Q6T311 187 aa16.33■□□□□ 0.2
COL7A1-207ENST00000467985 TSEN54Q7Z6J9 526 aaKnown RBP16.33■□□□□ 0.2
COL7A1-207ENST00000467985 LINC01356Q8N9X3 169 aa16.33■□□□□ 0.2
COL7A1-207ENST00000467985 ICA1LQ8NDH6 482 aa16.33■□□□□ 0.2
COL7A1-207ENST00000467985 OR1J1Q8NGS3 322 aa16.33■□□□□ 0.2
COL7A1-207ENST00000467985 AKR7LQ8NHP1 331 aa16.33■□□□□ 0.2
COL7A1-207ENST00000467985 FAM46AQ96IP4 442 aaKnown RBP16.33■□□□□ 0.2
COL7A1-207ENST00000467985 C7orf34Q96L11 122 aa16.33■□□□□ 0.2
COL7A1-207ENST00000467985 LRGUKQ96M69 825 aa16.33■□□□□ 0.2
COL7A1-207ENST00000467985 ZNF570Q96NI8 536 aa16.33■□□□□ 0.2
COL7A1-207ENST00000467985 TRIM15Q9C019 465 aa16.33■□□□□ 0.2
COL7A1-207ENST00000467985 NKIRAS2Q9NYR9 191 aa16.33■□□□□ 0.2
COL7A1-207ENST00000467985 ADAM18Q9Y3Q7 739 aa16.33■□□□□ 0.2
COL7A1-207ENST00000467985 LOC100509620A0A075B734 347 aa16.32■□□□□ 0.2
COL7A1-207ENST00000467985 ARPC2O15144 300 aa16.32■□□□□ 0.2
COL7A1-207ENST00000467985 RRP9O43818 475 aaKnown RBP16.32■□□□□ 0.2
COL7A1-207ENST00000467985 ICMTO60725 284 aa16.32■□□□□ 0.2
COL7A1-207ENST00000467985 GCH1P30793 250 aa16.32■□□□□ 0.2
COL7A1-207ENST00000467985 SMIM11AP58511 58 aa16.32■□□□□ 0.2
COL7A1-207ENST00000467985 ERVS71-1P61550 626 aa16.32■□□□□ 0.2
COL7A1-207ENST00000467985 ZNF718Q3SXZ3 478 aa16.32■□□□□ 0.2
COL7A1-207ENST00000467985 FAM120AOSQ5T036 256 aa16.32■□□□□ 0.2
COL7A1-207ENST00000467985 GPR139Q6DWJ6 353 aa16.32■□□□□ 0.2
COL7A1-207ENST00000467985 ASRGL1Q7L266 308 aa16.32■□□□□ 0.2
COL7A1-207ENST00000467985 SPATA3Q8NHX4 192 aa16.32■□□□□ 0.2
COL7A1-207ENST00000467985 C1orf159Q96HA4 380 aa16.32■□□□□ 0.2
COL7A1-207ENST00000467985 NSMCE2Q96MF7 247 aa16.32■□□□□ 0.2
COL7A1-207ENST00000467985 RAB3IPQ96QF0 476 aaPredicted RBP16.32■□□□□ 0.2
COL7A1-207ENST00000467985 WNT5BQ9H1J7 359 aa16.32■□□□□ 0.2
COL7A1-207ENST00000467985 POLE4Q9NR33 117 aa16.32■□□□□ 0.2
COL7A1-207ENST00000467985 PRSS37A4D1T9 235 aa16.31■□□□□ 0.2
COL7A1-207ENST00000467985 H3BSA7 217 aa16.31■□□□□ 0.2
COL7A1-207ENST00000467985 PTP4A3O75365 173 aa16.31■□□□□ 0.2
COL7A1-207ENST00000467985 SRD5A1P18405 259 aa16.31■□□□□ 0.2
COL7A1-207ENST00000467985 COL8A2P25067 703 aa16.31■□□□□ 0.2
COL7A1-207ENST00000467985 LIMS1P48059 325 aa16.31■□□□□ 0.2
COL7A1-207ENST00000467985 TEKQ02763 1124 aa16.31■□□□□ 0.2
COL7A1-207ENST00000467985 TRIM25Q14258 630 aaKnown RBP16.31■□□□□ 0.2
COL7A1-207ENST00000467985 TRIP10Q15642 601 aa16.31■□□□□ 0.2
COL7A1-207ENST00000467985 ALKBH6Q3KRA9 238 aa16.31■□□□□ 0.2
COL7A1-207ENST00000467985 ZNF771Q7L3S4 317 aaPredicted RBP16.31■□□□□ 0.2
COL7A1-207ENST00000467985 FAM122BQ7Z309 247 aa16.31■□□□□ 0.2
COL7A1-207ENST00000467985 DHFR2Q86XF0 187 aa16.31■□□□□ 0.2
COL7A1-207ENST00000467985 ZNF101Q8IZC7 436 aa16.31■□□□□ 0.2
COL7A1-207ENST00000467985 ASB9Q96DX5 294 aa16.31■□□□□ 0.2
COL7A1-207ENST00000467985 DHRS1Q96LJ7 313 aa16.31■□□□□ 0.2
COL7A1-207ENST00000467985 Q96M85 177 aa16.31■□□□□ 0.2
COL7A1-207ENST00000467985 GPX7Q96SL4 187 aaPredicted RBP16.31■□□□□ 0.2
COL7A1-207ENST00000467985 SOX7Q9BT81 388 aa16.31■□□□□ 0.2
COL7A1-207ENST00000467985 ELOVL3Q9HB03 270 aa16.31■□□□□ 0.2
COL7A1-207ENST00000467985 NDRG4Q9ULP0 352 aaKnown RBP16.31■□□□□ 0.2
COL7A1-207ENST00000467985 AURKCQ9UQB9 309 aa16.31■□□□□ 0.2
COL7A1-207ENST00000467985 SIGLEC7Q9Y286 467 aa16.31■□□□□ 0.2
COL7A1-207ENST00000467985 H7C1C5 153 aa16.3■□□□□ 0.2
COL7A1-207ENST00000467985 NCR1O76036 304 aa16.3■□□□□ 0.2
COL7A1-207ENST00000467985 COX5BP10606 129 aa16.3■□□□□ 0.2
COL7A1-207ENST00000467985 ZNF26P17031 533 aaPredicted RBP16.3■□□□□ 0.2
COL7A1-207ENST00000467985 PCMT1P22061 227 aa16.3■□□□□ 0.2
COL7A1-207ENST00000467985 SDHAP31040 664 aa16.3■□□□□ 0.2
COL7A1-207ENST00000467985 IL2RGP31785 369 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms