RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 SSR3Q9UNL2 185 aa13.02□□□□□ -0.32
DDX56-208ENST00000467318 LSM2Q9Y333 95 aaKnown RBP13.02□□□□□ -0.32
DDX56-208ENST00000467318 HIVEP3Q5T1R4 2406 aa13.02□□□□□ -0.32
DDX56-208ENST00000467318 A8MXE2 369 aa13.02□□□□□ -0.33
DDX56-208ENST00000467318 MYL12BO14950 172 aa13.02□□□□□ -0.33
DDX56-208ENST00000467318 SURF4O15260 269 aa13.02□□□□□ -0.33
DDX56-208ENST00000467318 CDKN2AP42771 156 aaKnown RBP13.02□□□□□ -0.33
DDX56-208ENST00000467318 SNAPC1Q16533 368 aa13.02□□□□□ -0.33
DDX56-208ENST00000467318 SLC25A35Q3KQZ1 300 aa13.02□□□□□ -0.33
DDX56-208ENST00000467318 CARD17Q5XLA6 110 aa13.02□□□□□ -0.33
DDX56-208ENST00000467318 Q6ZT83 130 aa13.02□□□□□ -0.33
DDX56-208ENST00000467318 LYSMD2Q8IV50 215 aa13.02□□□□□ -0.33
DDX56-208ENST00000467318 UBE2J2Q8N2K1 259 aa13.02□□□□□ -0.33
DDX56-208ENST00000467318 SYT14Q8NB59 555 aa13.02□□□□□ -0.33
DDX56-208ENST00000467318 NPEPL1Q8NDH3 523 aa13.02□□□□□ -0.33
DDX56-208ENST00000467318 LILRB4Q8NHJ6 448 aa13.02□□□□□ -0.33
DDX56-208ENST00000467318 TMEM54Q969K7 222 aa13.02□□□□□ -0.33
DDX56-208ENST00000467318 CEP19Q96LK0 163 aa13.02□□□□□ -0.33
DDX56-208ENST00000467318 OPALINQ96PE5 141 aa13.02□□□□□ -0.33
DDX56-208ENST00000467318 NMNAT3Q96T66 252 aa13.02□□□□□ -0.33
DDX56-208ENST00000467318 CENPOQ9BU64 300 aa13.02□□□□□ -0.33
DDX56-208ENST00000467318 CCDC32Q9BV29 185 aa13.02□□□□□ -0.33
DDX56-208ENST00000467318 SLC7A10Q9NS82 523 aa13.02□□□□□ -0.33
DDX56-208ENST00000467318 ASB6Q9NWX5 421 aa13.02□□□□□ -0.33
DDX56-208ENST00000467318 VSX1Q9NZR4 365 aaPredicted RBP13.02□□□□□ -0.33
DDX56-208ENST00000467318 PAIP2BQ9ULR5 123 aaKnown RBP13.02□□□□□ -0.33
DDX56-208ENST00000467318 PCNX1Q96RV3 2341 aa13.02□□□□□ -0.33
DDX56-208ENST00000467318 SLC22A23A1A5C7 686 aa13.01□□□□□ -0.33
DDX56-208ENST00000467318 BOLA2-SMG1P6H3BVE0 249 aa13.01□□□□□ -0.33
DDX56-208ENST00000467318 RPL36A-HNRNPH2H7BZ11 118 aa13.01□□□□□ -0.33
DDX56-208ENST00000467318 J3QKU1 62 aa13.01□□□□□ -0.33
DDX56-208ENST00000467318 RENP00797 406 aa13.01□□□□□ -0.33
DDX56-208ENST00000467318 APOA1P02647 267 aa13.01□□□□□ -0.33
DDX56-208ENST00000467318 PLA2G2AP14555 144 aa13.01□□□□□ -0.33
DDX56-208ENST00000467318 EDNRAP25101 427 aa13.01□□□□□ -0.33
DDX56-208ENST00000467318 CRABP1P29762 137 aa13.01□□□□□ -0.33
DDX56-208ENST00000467318 TGFBR1P36897 503 aa13.01□□□□□ -0.33
DDX56-208ENST00000467318 RORCP51449 518 aa13.01□□□□□ -0.33
DDX56-208ENST00000467318 ZNF91Q05481 1191 aa13.01□□□□□ -0.33
DDX56-208ENST00000467318 LEG1Q6P5S2 330 aa13.01□□□□□ -0.33
DDX56-208ENST00000467318 EGFL6Q8IUX8 553 aa13.01□□□□□ -0.33
DDX56-208ENST00000467318 LIX1LQ8IVB5 337 aa13.01□□□□□ -0.33
DDX56-208ENST00000467318 WDFY1Q8IWB7 410 aa13.01□□□□□ -0.33
DDX56-208ENST00000467318 ZNF610Q8N9Z0 462 aa13.01□□□□□ -0.33
DDX56-208ENST00000467318 SDR9C7Q8NEX9 313 aa13.01□□□□□ -0.33
DDX56-208ENST00000467318 CA5BP1Q8WTZ4 195 aa13.01□□□□□ -0.33
DDX56-208ENST00000467318 FN3KQ9H479 309 aa13.01□□□□□ -0.33
DDX56-208ENST00000467318 FGF20Q9NP95 211 aaPredicted RBP13.01□□□□□ -0.33
DDX56-208ENST00000467318 ABCB10Q9NRK6 738 aa13.01□□□□□ -0.33
DDX56-208ENST00000467318 DNAJC27Q9NZQ0 273 aa13.01□□□□□ -0.33
DDX56-208ENST00000467318 JKAMPQ9P055 326 aa13.01□□□□□ -0.33
DDX56-208ENST00000467318 NCOA6Q14686 2063 aaPredicted RBP13.01□□□□□ -0.33
DDX56-208ENST00000467318 DIDO1Q9BTC0 2240 aaKnown RBP13□□□□□ -0.33
DDX56-208ENST00000467318 EEF1E1-BLOC1S5C9J1V9 151 aa13□□□□□ -0.33
DDX56-208ENST00000467318 ZNF587BE7ETH6 402 aa13□□□□□ -0.33
DDX56-208ENST00000467318 M0R129 80 aa13□□□□□ -0.33
DDX56-208ENST00000467318 EEF1E1O43324 174 aaKnown RBP13□□□□□ -0.33
DDX56-208ENST00000467318 TLX2O43763 284 aaPredicted RBP13□□□□□ -0.33
DDX56-208ENST00000467318 UPK3AO75631 287 aa13□□□□□ -0.33
DDX56-208ENST00000467318 IGHV3-9P01782 118 aa13□□□□□ -0.33
DDX56-208ENST00000467318 QDPRP09417 244 aa13□□□□□ -0.33
DDX56-208ENST00000467318 MYL12AP19105 171 aa13□□□□□ -0.33
DDX56-208ENST00000467318 PAICSP22234 425 aaKnown RBP13□□□□□ -0.33
DDX56-208ENST00000467318 ZNF133P52736 654 aaPredicted RBP13□□□□□ -0.33
DDX56-208ENST00000467318 RAB40BQ12829 278 aa13□□□□□ -0.33
DDX56-208ENST00000467318 STK11Q15831 433 aa13□□□□□ -0.33
DDX56-208ENST00000467318 LRFN4Q6PJG9 635 aa13□□□□□ -0.33
DDX56-208ENST00000467318 ZC3HAV1Q7Z2W4 902 aaKnown RBP13□□□□□ -0.33
DDX56-208ENST00000467318 ZNF808Q8N4W9 903 aaPredicted RBP13□□□□□ -0.33
DDX56-208ENST00000467318 PARP16Q8N5Y8 322 aa13□□□□□ -0.33
DDX56-208ENST00000467318 SLC37A3Q8NCC5 494 aa13□□□□□ -0.33
DDX56-208ENST00000467318 TMEM163Q8TC26 289 aa13□□□□□ -0.33
DDX56-208ENST00000467318 MCHR2Q969V1 340 aa13□□□□□ -0.33
DDX56-208ENST00000467318 DDOQ99489 341 aa13□□□□□ -0.33
DDX56-208ENST00000467318 ULBP2Q9BZM5 246 aa13□□□□□ -0.33
DDX56-208ENST00000467318 OPN3Q9H1Y3 402 aaPredicted RBP13□□□□□ -0.33
DDX56-208ENST00000467318 SYT4Q9H2B2 425 aa13□□□□□ -0.33
DDX56-208ENST00000467318 CRLF2Q9HC73 371 aa13□□□□□ -0.33
DDX56-208ENST00000467318 NDUFB11Q9NX14 153 aa13□□□□□ -0.33
DDX56-208ENST00000467318 PRSS50Q9UI38 385 aa13□□□□□ -0.33
DDX56-208ENST00000467318 EXOSC1Q9Y3B2 195 aaKnown RBP13□□□□□ -0.33
DDX56-208ENST00000467318 FREM1Q5H8C1 2179 aa13□□□□□ -0.33
DDX56-208ENST00000467318 OR6C68A6NDL8 312 aa12.99□□□□□ -0.33
DDX56-208ENST00000467318 PRODHO43272 600 aa12.99□□□□□ -0.33
DDX56-208ENST00000467318 GPX5O75715 221 aa12.99□□□□□ -0.33
DDX56-208ENST00000467318 SLC2A10O95528 541 aa12.99□□□□□ -0.33
DDX56-208ENST00000467318 MPGP29372 298 aa12.99□□□□□ -0.33
DDX56-208ENST00000467318 EFNB1P98172 346 aa12.99□□□□□ -0.33
DDX56-208ENST00000467318 FAPQ12884 760 aa12.99□□□□□ -0.33
DDX56-208ENST00000467318 CBX3Q13185 183 aa12.99□□□□□ -0.33
DDX56-208ENST00000467318 CRMP1Q14194 572 aa12.99□□□□□ -0.33
DDX56-208ENST00000467318 P2RY6Q15077 328 aa12.99□□□□□ -0.33
DDX56-208ENST00000467318 SSX1Q16384 188 aa12.99□□□□□ -0.33
DDX56-208ENST00000467318 C10orf128Q5T292 105 aa12.99□□□□□ -0.33
DDX56-208ENST00000467318 DNM1P34Q6PK57 102 aa12.99□□□□□ -0.33
DDX56-208ENST00000467318 LUZP2Q86TE4 346 aa12.99□□□□□ -0.33
DDX56-208ENST00000467318 CCDC190Q86UF4 302 aa12.99□□□□□ -0.33
DDX56-208ENST00000467318 GABRG1Q8N1C3 465 aa12.99□□□□□ -0.33
DDX56-208ENST00000467318 POC5Q8NA72 575 aa12.99□□□□□ -0.33
DDX56-208ENST00000467318 RELL2Q8NC24 303 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms