RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 OR5H8P0DN80 308 aa2.8□□□□□ -1.96
VPS13A-209ENST00000467124 CRISP2P16562 243 aa2.8□□□□□ -1.96
VPS13A-209ENST00000467124 GPX4P36969 197 aaPredicted RBP2.8□□□□□ -1.96
VPS13A-209ENST00000467124 RFC3P40938 356 aa2.8□□□□□ -1.96
VPS13A-209ENST00000467124 CXCL5P42830 114 aa2.8□□□□□ -1.96
VPS13A-209ENST00000467124 NMUP48645 174 aa2.8□□□□□ -1.96
VPS13A-209ENST00000467124 CSNK1DP48730 415 aa2.8□□□□□ -1.96
VPS13A-209ENST00000467124 PRPSAP1Q14558 356 aa2.8□□□□□ -1.96
VPS13A-209ENST00000467124 TMEM183BQ1AE95 376 aa2.8□□□□□ -1.96
VPS13A-209ENST00000467124 TRMT5Q32P41 509 aaKnown RBP2.8□□□□□ -1.96
VPS13A-209ENST00000467124 TTLL9Q3SXZ7 439 aa2.8□□□□□ -1.96
VPS13A-209ENST00000467124 XKR4Q5GH76 650 aa2.8□□□□□ -1.96
VPS13A-209ENST00000467124 COA6Q5JTJ3 125 aaKnown RBP2.8□□□□□ -1.96
VPS13A-209ENST00000467124 GPR107Q5VW38 600 aa2.8□□□□□ -1.96
VPS13A-209ENST00000467124 ZNF547Q8IVP9 402 aa2.8□□□□□ -1.96
VPS13A-209ENST00000467124 TMEM183AQ8IXX5 376 aa2.8□□□□□ -1.96
VPS13A-209ENST00000467124 JAGN1Q8N5M9 183 aa2.8□□□□□ -1.96
VPS13A-209ENST00000467124 OR51E1Q8TCB6 317 aa2.8□□□□□ -1.96
VPS13A-209ENST00000467124 ZNF317Q96PQ6 595 aaPredicted RBP2.8□□□□□ -1.96
VPS13A-209ENST00000467124 SH3GL3Q99963 347 aa2.8□□□□□ -1.96
VPS13A-209ENST00000467124 ECSITQ9BQ95 431 aa2.8□□□□□ -1.96
VPS13A-209ENST00000467124 MRPL37Q9BZE1 423 aaKnown RBP2.8□□□□□ -1.96
VPS13A-209ENST00000467124 NAA50Q9GZZ1 169 aaKnown RBP2.8□□□□□ -1.96
VPS13A-209ENST00000467124 RGCCQ9H4X1 137 aa2.8□□□□□ -1.96
VPS13A-209ENST00000467124 TMEM38AQ9H6F2 299 aa2.8□□□□□ -1.96
VPS13A-209ENST00000467124 ZNF226Q9NYT6 803 aa2.8□□□□□ -1.96
VPS13A-209ENST00000467124 RPS6KB2Q9UBS0 482 aa2.8□□□□□ -1.96
VPS13A-209ENST00000467124 ZNF629Q9UEG4 869 aaPredicted RBP2.8□□□□□ -1.96
VPS13A-209ENST00000467124 DDX19BQ9UMR2 479 aa2.8□□□□□ -1.96
VPS13A-209ENST00000467124 RCL1Q9Y2P8 373 aaKnown RBP2.8□□□□□ -1.96
VPS13A-209ENST00000467124 KCNE1BA0A087WTH5 132 aa2.79□□□□□ -1.96
VPS13A-209ENST00000467124 LYRM9A8MSI8 78 aa2.79□□□□□ -1.96
VPS13A-209ENST00000467124 LSM8O95777 96 aaKnown RBP2.79□□□□□ -1.96
VPS13A-209ENST00000467124 MBP02144 154 aa2.79□□□□□ -1.96
VPS13A-209ENST00000467124 BGLAPP02818 100 aa2.79□□□□□ -1.96
VPS13A-209ENST00000467124 KRTAP1-4P0C5Y4 121 aa2.79□□□□□ -1.96
VPS13A-209ENST00000467124 UBTFL6P0CB48 400 aaPredicted RBP2.79□□□□□ -1.96
VPS13A-209ENST00000467124 PRPS2P11908 318 aa2.79□□□□□ -1.96
VPS13A-209ENST00000467124 CTRB1P17538 263 aa2.79□□□□□ -1.96
VPS13A-209ENST00000467124 SRMP19623 302 aa2.79□□□□□ -1.96
VPS13A-209ENST00000467124 CEACAM3P40198 252 aa2.79□□□□□ -1.96
VPS13A-209ENST00000467124 CEACAM6P40199 344 aa2.79□□□□□ -1.96
VPS13A-209ENST00000467124 CDKN2BP42772 138 aa2.79□□□□□ -1.96
VPS13A-209ENST00000467124 LHX2P50458 406 aa2.79□□□□□ -1.96
VPS13A-209ENST00000467124 RAD51Q06609 339 aa2.79□□□□□ -1.96
VPS13A-209ENST00000467124 SPAG1Q07617 926 aa2.79□□□□□ -1.96
VPS13A-209ENST00000467124 MAB21L1Q13394 359 aa2.79□□□□□ -1.96
VPS13A-209ENST00000467124 OR7A5Q15622 319 aa2.79□□□□□ -1.96
VPS13A-209ENST00000467124 KLHL40Q2TBA0 621 aa2.79□□□□□ -1.96
VPS13A-209ENST00000467124 ANKRD22Q5VYY1 191 aa2.79□□□□□ -1.96
VPS13A-209ENST00000467124 PLET1Q6UQ28 207 aa2.79□□□□□ -1.96
VPS13A-209ENST00000467124 TMEM150AQ86TG1 271 aa2.79□□□□□ -1.96
VPS13A-209ENST00000467124 TMEM135Q86UB9 458 aa2.79□□□□□ -1.96
VPS13A-209ENST00000467124 CMTM8Q8IZV2 173 aa2.79□□□□□ -1.96
VPS13A-209ENST00000467124 STPG2Q8N412 459 aa2.79□□□□□ -1.96
VPS13A-209ENST00000467124 ARRDC1Q8N5I2 433 aa2.79□□□□□ -1.96
VPS13A-209ENST00000467124 TRAM1L1Q8N609 369 aa2.79□□□□□ -1.96
VPS13A-209ENST00000467124 SNX31Q8N9S9 440 aa2.79□□□□□ -1.96
VPS13A-209ENST00000467124 PROKR2Q8NFJ6 384 aa2.79□□□□□ -1.96
VPS13A-209ENST00000467124 APH1BQ8WW43 257 aa2.79□□□□□ -1.96
VPS13A-209ENST00000467124 ZNF75CPQ92670 426 aaPredicted RBP2.79□□□□□ -1.96
VPS13A-209ENST00000467124 TSSK3Q96PN8 268 aa2.79□□□□□ -1.96
VPS13A-209ENST00000467124 NRTNQ99748 197 aa2.79□□□□□ -1.96
VPS13A-209ENST00000467124 FOXC2Q99958 501 aa2.79□□□□□ -1.96
VPS13A-209ENST00000467124 PLA2G2FQ9BZM2 168 aa2.79□□□□□ -1.96
VPS13A-209ENST00000467124 ZYG11BQ9C0D3 744 aa2.79□□□□□ -1.96
VPS13A-209ENST00000467124 FBXO44Q9H4M3 255 aa2.79□□□□□ -1.96
VPS13A-209ENST00000467124 NUFIP1Q9UHK0 495 aaKnown RBP2.79□□□□□ -1.96
VPS13A-209ENST00000467124 YARS2Q9Y2Z4 477 aaKnown RBP2.79□□□□□ -1.96
VPS13A-209ENST00000467124 CROCCQ5TZA2 2017 aa2.79□□□□□ -1.96
VPS13A-209ENST00000467124 SCN2AQ99250 2005 aa2.78□□□□□ -1.96
VPS13A-209ENST00000467124 CENPJQ9HC77 1338 aaPredicted RBP2.78□□□□□ -1.96
VPS13A-209ENST00000467124 NOTCH3Q9UM47 2321 aa2.78□□□□□ -1.96
VPS13A-209ENST00000467124 IGLV1-36A0A0B4J1U3 117 aa2.78□□□□□ -1.96
VPS13A-209ENST00000467124 A0A1B0GVY2 172 aa2.78□□□□□ -1.96
VPS13A-209ENST00000467124 PLAC8L1A1L4L8 177 aa2.78□□□□□ -1.96
VPS13A-209ENST00000467124 NCBP2LA6PVI3 153 aaKnown RBP2.78□□□□□ -1.96
VPS13A-209ENST00000467124 A8MU10 97 aa2.78□□□□□ -1.96
VPS13A-209ENST00000467124 H7C1H1 209 aa2.78□□□□□ -1.96
VPS13A-209ENST00000467124 LAD1O00515 517 aa2.78□□□□□ -1.96
VPS13A-209ENST00000467124 GABRPO00591 440 aa2.78□□□□□ -1.96
VPS13A-209ENST00000467124 ZBTB5O15062 677 aa2.78□□□□□ -1.96
VPS13A-209ENST00000467124 GABARAPO95166 117 aa2.78□□□□□ -1.96
VPS13A-209ENST00000467124 HLA-HP01893 362 aa2.78□□□□□ -1.96
VPS13A-209ENST00000467124 NR2C1P13056 603 aa2.78□□□□□ -1.96
VPS13A-209ENST00000467124 TCP1P17987 556 aaKnown RBP2.78□□□□□ -1.96
VPS13A-209ENST00000467124 CD82P27701 267 aa2.78□□□□□ -1.96
VPS13A-209ENST00000467124 NOVP48745 357 aa2.78□□□□□ -1.96
VPS13A-209ENST00000467124 ZNF136P52737 540 aa2.78□□□□□ -1.96
VPS13A-209ENST00000467124 PSMD4P55036 377 aaKnown RBP2.78□□□□□ -1.96
VPS13A-209ENST00000467124 RGNQ15493 299 aa2.78□□□□□ -1.96
VPS13A-209ENST00000467124 TSC22D1Q15714 1073 aa2.78□□□□□ -1.96
VPS13A-209ENST00000467124 SNRNP35Q16560 246 aaKnown RBP2.78□□□□□ -1.96
VPS13A-209ENST00000467124 POU2AF1Q16633 256 aa2.78□□□□□ -1.96
VPS13A-209ENST00000467124 SPESP1Q6UW49 350 aa2.78□□□□□ -1.96
VPS13A-209ENST00000467124 MRPL55Q7Z7F7 128 aaKnown RBP2.78□□□□□ -1.96
VPS13A-209ENST00000467124 ZNF429Q86V71 674 aa2.78□□□□□ -1.96
VPS13A-209ENST00000467124 ARIH2OSQ8N7S6 290 aa2.78□□□□□ -1.96
VPS13A-209ENST00000467124 OR2A1Q8NGT9 310 aa2.78□□□□□ -1.96
VPS13A-209ENST00000467124 ASB9Q96DX5 294 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms