RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 TEX29Q8N6K0 151 aa16.27■□□□□ 0.2
COL9A3-206ENST00000466532 ZNF418Q8TF45 676 aaPredicted RBP16.27■□□□□ 0.2
COL9A3-206ENST00000466532 ZFAND2BQ8WV99 257 aa16.27■□□□□ 0.2
COL9A3-206ENST00000466532 CCL17Q92583 94 aa16.27■□□□□ 0.2
COL9A3-206ENST00000466532 FNDC11Q9BVV2 318 aa16.27■□□□□ 0.2
COL9A3-206ENST00000466532 CYSLTR2Q9NS75 346 aa16.27■□□□□ 0.2
COL9A3-206ENST00000466532 MAN2C1Q9NTJ4 1040 aa16.27■□□□□ 0.2
COL9A3-206ENST00000466532 SNX13Q9Y5W8 968 aa16.27■□□□□ 0.2
COL9A3-206ENST00000466532 CAPN7Q9Y6W3 813 aa16.27■□□□□ 0.2
COL9A3-206ENST00000466532 A0A0G2JMP0 313 aa16.26■□□□□ 0.19
COL9A3-206ENST00000466532 A0A0X1KG70 313 aa16.26■□□□□ 0.19
COL9A3-206ENST00000466532 A6NIZ1 184 aa16.26■□□□□ 0.19
COL9A3-206ENST00000466532 EFCAB9A8MZ26 197 aa16.26■□□□□ 0.19
COL9A3-206ENST00000466532 J3KTA2 159 aa16.26■□□□□ 0.19
COL9A3-206ENST00000466532 NGFP01138 241 aa16.26■□□□□ 0.19
COL9A3-206ENST00000466532 AVPP01185 164 aa16.26■□□□□ 0.19
COL9A3-206ENST00000466532 IFNW1P05000 195 aa16.26■□□□□ 0.19
COL9A3-206ENST00000466532 MSR1P21757 451 aa16.26■□□□□ 0.19
COL9A3-206ENST00000466532 RAP1BP61224 184 aa16.26■□□□□ 0.19
COL9A3-206ENST00000466532 RAP1AP62834 184 aa16.26■□□□□ 0.19
COL9A3-206ENST00000466532 PRKCDQ05655 676 aa16.26■□□□□ 0.19
COL9A3-206ENST00000466532 ANKDD1AQ495B1 522 aa16.26■□□□□ 0.19
COL9A3-206ENST00000466532 OAFQ86UD1 273 aa16.26■□□□□ 0.19
COL9A3-206ENST00000466532 OR4M2Q8NGB6 313 aa16.26■□□□□ 0.19
COL9A3-206ENST00000466532 OR13C2Q8NGS9 318 aa16.26■□□□□ 0.19
COL9A3-206ENST00000466532 RCN3Q96D15 328 aa16.26■□□□□ 0.19
COL9A3-206ENST00000466532 C4orf45Q96LM5 186 aa16.26■□□□□ 0.19
COL9A3-206ENST00000466532 EGLN1Q9GZT9 426 aa16.26■□□□□ 0.19
COL9A3-206ENST00000466532 ELOVL3Q9HB03 270 aa16.26■□□□□ 0.19
COL9A3-206ENST00000466532 CMTM6Q9NX76 183 aa16.26■□□□□ 0.19
COL9A3-206ENST00000466532 GMPR2Q9P2T1 348 aaKnown RBP16.26■□□□□ 0.19
COL9A3-206ENST00000466532 C12orf71A8MTZ7 269 aa16.25■□□□□ 0.19
COL9A3-206ENST00000466532 H3BSA7 217 aa16.25■□□□□ 0.19
COL9A3-206ENST00000466532 H7C1C5 153 aa16.25■□□□□ 0.19
COL9A3-206ENST00000466532 ICMTO60725 284 aa16.25■□□□□ 0.19
COL9A3-206ENST00000466532 EPHA1P21709 976 aa16.25■□□□□ 0.19
COL9A3-206ENST00000466532 LIPAP38571 399 aa16.25■□□□□ 0.19
COL9A3-206ENST00000466532 SLC9A3P48764 834 aa16.25■□□□□ 0.19
COL9A3-206ENST00000466532 ARHGDIAP52565 204 aa16.25■□□□□ 0.19
COL9A3-206ENST00000466532 LCN6P62502 163 aa16.25■□□□□ 0.19
COL9A3-206ENST00000466532 FHL1Q13642 323 aa16.25■□□□□ 0.19
COL9A3-206ENST00000466532 ENDOGQ14249 297 aaKnown RBP16.25■□□□□ 0.19
COL9A3-206ENST00000466532 ZNF771Q7L3S4 317 aaPredicted RBP16.25■□□□□ 0.19
COL9A3-206ENST00000466532 POU5F2Q8N7G0 328 aa16.25■□□□□ 0.19
COL9A3-206ENST00000466532 GAL3ST1Q99999 423 aa16.25■□□□□ 0.19
COL9A3-206ENST00000466532 TMPRSS13Q9BYE2 586 aa16.25■□□□□ 0.19
COL9A3-206ENST00000466532 ARMCX1Q9P291 453 aa16.25■□□□□ 0.19
COL9A3-206ENST00000466532 CGGBP1Q9UFW8 167 aaPredicted RBP16.25■□□□□ 0.19
COL9A3-206ENST00000466532 ZDHHC8Q9ULC8 765 aa16.25■□□□□ 0.19
COL9A3-206ENST00000466532 PCDHB10Q9UN67 800 aa16.25■□□□□ 0.19
COL9A3-206ENST00000466532 AP3M1Q9Y2T2 418 aa16.25■□□□□ 0.19
COL9A3-206ENST00000466532 TENM1Q9UKZ4 2725 aa16.25■□□□□ 0.19
COL9A3-206ENST00000466532 ISPDA4D126 451 aa16.24■□□□□ 0.19
COL9A3-206ENST00000466532 FFAR1O14842 300 aa16.24■□□□□ 0.19
COL9A3-206ENST00000466532 UBOX5O94941 541 aa16.24■□□□□ 0.19
COL9A3-206ENST00000466532 ZNF682O95780 498 aa16.24■□□□□ 0.19
COL9A3-206ENST00000466532 ADH4P08319 380 aa16.24■□□□□ 0.19
COL9A3-206ENST00000466532 SLC3A1Q07837 685 aa16.24■□□□□ 0.19
COL9A3-206ENST00000466532 ZMAT1Q5H9K5 638 aa16.24■□□□□ 0.19
COL9A3-206ENST00000466532 DCAF12L2Q5VW00 463 aa16.24■□□□□ 0.19
COL9A3-206ENST00000466532 ARL9Q6T311 187 aa16.24■□□□□ 0.19
COL9A3-206ENST00000466532 ZNF730Q6ZMV8 503 aa16.24■□□□□ 0.19
COL9A3-206ENST00000466532 ARPINQ7Z6K5 226 aa16.24■□□□□ 0.19
COL9A3-206ENST00000466532 SYT9Q86SS6 491 aa16.24■□□□□ 0.19
COL9A3-206ENST00000466532 RNF113BQ8IZP6 322 aaKnown RBP16.24■□□□□ 0.19
COL9A3-206ENST00000466532 GEMIN6Q8WXD5 167 aaKnown RBP16.24■□□□□ 0.19
COL9A3-206ENST00000466532 ACOT11Q8WXI4 607 aaPredicted RBP16.24■□□□□ 0.19
COL9A3-206ENST00000466532 DIRC2Q96SL1 478 aa16.24■□□□□ 0.19
COL9A3-206ENST00000466532 MSL2Q9HCI7 577 aa16.24■□□□□ 0.19
COL9A3-206ENST00000466532 POLE4Q9NR33 117 aa16.24■□□□□ 0.19
COL9A3-206ENST00000466532 KLHL21Q9UJP4 597 aa16.24■□□□□ 0.19
COL9A3-206ENST00000466532 NDRG4Q9ULP0 352 aaKnown RBP16.24■□□□□ 0.19
COL9A3-206ENST00000466532 A0A087WUU8 490 aa16.23■□□□□ 0.19
COL9A3-206ENST00000466532 J3QLI3 93 aa16.23■□□□□ 0.19
COL9A3-206ENST00000466532 CXCR6O00574 342 aa16.23■□□□□ 0.19
COL9A3-206ENST00000466532 SLC22A2O15244 555 aa16.23■□□□□ 0.19
COL9A3-206ENST00000466532 TIMM8AO60220 97 aaPredicted RBP16.23■□□□□ 0.19
COL9A3-206ENST00000466532 ABHD16AO95870 558 aa16.23■□□□□ 0.19
COL9A3-206ENST00000466532 SCG5P05408 212 aa16.23■□□□□ 0.19
COL9A3-206ENST00000466532 RPL4P36578 427 aaKnown RBP16.23■□□□□ 0.19
COL9A3-206ENST00000466532 GPR4P46093 362 aa16.23■□□□□ 0.19
COL9A3-206ENST00000466532 ACTG1P63261 375 aa16.23■□□□□ 0.19
COL9A3-206ENST00000466532 LIPEQ05469 1076 aa16.23■□□□□ 0.19
COL9A3-206ENST00000466532 IFI44LQ53G44 452 aa16.23■□□□□ 0.19
COL9A3-206ENST00000466532 SPRNQ5BIV9 151 aa16.23■□□□□ 0.19
COL9A3-206ENST00000466532 C1QL2Q7Z5L3 287 aa16.23■□□□□ 0.19
COL9A3-206ENST00000466532 PEG10Q86TG7 708 aaKnown RBP16.23■□□□□ 0.19
COL9A3-206ENST00000466532 SLC15A3Q8IY34 581 aa16.23■□□□□ 0.19
COL9A3-206ENST00000466532 EMC7Q9NPA0 242 aa16.23■□□□□ 0.19
COL9A3-206ENST00000466532 UBAP1Q9NZ09 502 aa16.23■□□□□ 0.19
COL9A3-206ENST00000466532 GRHPRQ9UBQ7 328 aa16.23■□□□□ 0.19
COL9A3-206ENST00000466532 ADAM18Q9Y3Q7 739 aa16.23■□□□□ 0.19
COL9A3-206ENST00000466532 CDC42EP2O14613 210 aa16.22■□□□□ 0.19
COL9A3-206ENST00000466532 GSTA4O15217 222 aa16.22■□□□□ 0.19
COL9A3-206ENST00000466532 CD55P08174 381 aa16.22■□□□□ 0.19
COL9A3-206ENST00000466532 ADRA2CP18825 462 aa16.22■□□□□ 0.19
COL9A3-206ENST00000466532 CFPP27918 469 aa16.22■□□□□ 0.19
COL9A3-206ENST00000466532 HILS1P60008 231 aa16.22■□□□□ 0.19
COL9A3-206ENST00000466532 MTX3Q5HYI7 312 aa16.22■□□□□ 0.19
COL9A3-206ENST00000466532 TBPL2Q6SJ96 375 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms