RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 THAP7Q9BT49 309 aaPredicted RBP16.6■□□□□ 0.25
CAPN3-209ENST00000466222 WACQ9BTA9 647 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 CPAMD8Q8IZJ3 1885 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 A0A0G2JK05 382 aa16.59■□□□□ 0.25
CAPN3-209ENST00000466222 TEX13CA0A0J9YWL9 993 aa16.59■□□□□ 0.25
CAPN3-209ENST00000466222 P2RY4P51582 365 aa16.59■□□□□ 0.25
CAPN3-209ENST00000466222 TMPRSS3P57727 454 aa16.59■□□□□ 0.25
CAPN3-209ENST00000466222 MADCAM1Q13477 382 aa16.59■□□□□ 0.25
CAPN3-209ENST00000466222 GGTLC2Q14390 218 aa16.59■□□□□ 0.25
CAPN3-209ENST00000466222 SAMD12Q8N8I0 201 aa16.59■□□□□ 0.25
CAPN3-209ENST00000466222 PGLYRP3Q96LB9 341 aa16.59■□□□□ 0.25
CAPN3-209ENST00000466222 KLHL15Q96M94 604 aa16.59■□□□□ 0.25
CAPN3-209ENST00000466222 UCN2Q96RP3 112 aa16.59■□□□□ 0.25
CAPN3-209ENST00000466222 GPX7Q96SL4 187 aaPredicted RBP16.59■□□□□ 0.25
CAPN3-209ENST00000466222 NMNAT3Q96T66 252 aa16.59■□□□□ 0.25
CAPN3-209ENST00000466222 SRXN1Q9BYN0 137 aa16.59■□□□□ 0.25
CAPN3-209ENST00000466222 ACOXLQ9NUZ1 547 aa16.59■□□□□ 0.25
CAPN3-209ENST00000466222 ALKBH4Q9NXW9 302 aa16.59■□□□□ 0.25
CAPN3-209ENST00000466222 ABRACLQ9P1F3 81 aa16.59■□□□□ 0.25
CAPN3-209ENST00000466222 ZNF346Q9UL40 294 aaKnown RBP16.59■□□□□ 0.25
CAPN3-209ENST00000466222 RASD1Q9Y272 281 aa16.59■□□□□ 0.25
CAPN3-209ENST00000466222 HDGFL3Q9Y3E1 203 aa16.59■□□□□ 0.25
CAPN3-209ENST00000466222 H7C1C5 153 aa16.58■□□□□ 0.25
CAPN3-209ENST00000466222 J3QLW9 94 aa16.58■□□□□ 0.25
CAPN3-209ENST00000466222 OGG1O15527 345 aa16.58■□□□□ 0.25
CAPN3-209ENST00000466222 GYPBP06028 91 aa16.58■□□□□ 0.25
CAPN3-209ENST00000466222 EIF4EP06730 217 aaKnown RBP16.58■□□□□ 0.25
CAPN3-209ENST00000466222 CD14P08571 375 aa16.58■□□□□ 0.25
CAPN3-209ENST00000466222 ZNF19P17023 458 aa16.58■□□□□ 0.25
CAPN3-209ENST00000466222 POU3F2P20265 443 aaPredicted RBP16.58■□□□□ 0.25
CAPN3-209ENST00000466222 LCN6P62502 163 aa16.58■□□□□ 0.25
CAPN3-209ENST00000466222 PITPNAQ00169 270 aa16.58■□□□□ 0.25
CAPN3-209ENST00000466222 SRYQ05066 204 aa16.58■□□□□ 0.25
CAPN3-209ENST00000466222 GPR176Q14439 515 aa16.58■□□□□ 0.25
CAPN3-209ENST00000466222 MELKQ14680 651 aa16.58■□□□□ 0.25
CAPN3-209ENST00000466222 OR6S1Q8NH40 331 aa16.58■□□□□ 0.25
CAPN3-209ENST00000466222 PHYHIPQ92561 330 aa16.58■□□□□ 0.25
CAPN3-209ENST00000466222 TAAR6Q96RI8 345 aa16.58■□□□□ 0.25
CAPN3-209ENST00000466222 CHST11Q9NPF2 352 aa16.58■□□□□ 0.25
CAPN3-209ENST00000466222 NBEAQ8NFP9 2946 aa16.58■□□□□ 0.24
CAPN3-209ENST00000466222 E9PI62 339 aa16.58■□□□□ 0.24
CAPN3-209ENST00000466222 MKRN2OSH3BPM6 223 aa16.58■□□□□ 0.24
CAPN3-209ENST00000466222 DVL2O14641 736 aa16.58■□□□□ 0.24
CAPN3-209ENST00000466222 ARL6IP5O75915 188 aa16.58■□□□□ 0.24
CAPN3-209ENST00000466222 OR6A2O95222 327 aa16.58■□□□□ 0.24
CAPN3-209ENST00000466222 OR2T7P0C7T2 308 aa16.58■□□□□ 0.24
CAPN3-209ENST00000466222 RAB3BP20337 219 aa16.58■□□□□ 0.24
CAPN3-209ENST00000466222 ENPP1P22413 925 aa16.58■□□□□ 0.24
CAPN3-209ENST00000466222 CDKN2AP42771 156 aaKnown RBP16.58■□□□□ 0.24
CAPN3-209ENST00000466222 SLC3A1Q07837 685 aa16.58■□□□□ 0.24
CAPN3-209ENST00000466222 LGALS3BPQ08380 585 aa16.58■□□□□ 0.24
CAPN3-209ENST00000466222 PUDPQ08623 228 aa16.58■□□□□ 0.24
CAPN3-209ENST00000466222 SLC10A1Q14973 349 aa16.58■□□□□ 0.24
CAPN3-209ENST00000466222 ACKR1Q16570 336 aa16.58■□□□□ 0.24
CAPN3-209ENST00000466222 C3AR1Q16581 482 aa16.58■□□□□ 0.24
CAPN3-209ENST00000466222 ACSM3Q53FZ2 586 aa16.58■□□□□ 0.24
CAPN3-209ENST00000466222 PLA1AQ53H76 456 aa16.58■□□□□ 0.24
CAPN3-209ENST00000466222 FAM98AQ8NCA5 519 aaKnown RBP16.58■□□□□ 0.24
CAPN3-209ENST00000466222 LSM14AQ8ND56 463 aaKnown RBP16.58■□□□□ 0.24
CAPN3-209ENST00000466222 OR2T27Q8NH04 317 aa16.58■□□□□ 0.24
CAPN3-209ENST00000466222 TRMT10AQ8TBZ6 339 aaKnown RBP16.58■□□□□ 0.24
CAPN3-209ENST00000466222 CMTM3Q96MX0 182 aa16.58■□□□□ 0.24
CAPN3-209ENST00000466222 ZNF71Q9NQZ8 489 aaPredicted RBP16.58■□□□□ 0.24
CAPN3-209ENST00000466222 KLHL13Q9P2N7 655 aa16.58■□□□□ 0.24
CAPN3-209ENST00000466222 B3GAT1Q9P2W7 334 aa16.58■□□□□ 0.24
CAPN3-209ENST00000466222 ST6GALNAC2Q9UJ37 374 aa16.58■□□□□ 0.24
CAPN3-209ENST00000466222 TP53TG5Q9Y2B4 290 aa16.58■□□□□ 0.24
CAPN3-209ENST00000466222 A0A087WV48 116 aa16.57■□□□□ 0.24
CAPN3-209ENST00000466222 ANKRD34BA5PLL1 514 aa16.57■□□□□ 0.24
CAPN3-209ENST00000466222 TMEM127O75204 238 aa16.57■□□□□ 0.24
CAPN3-209ENST00000466222 GATBO75879 557 aaKnown RBP16.57■□□□□ 0.24
CAPN3-209ENST00000466222 DHFRP00374 187 aa16.57■□□□□ 0.24
CAPN3-209ENST00000466222 MRPL3P09001 348 aaKnown RBP16.57■□□□□ 0.24
CAPN3-209ENST00000466222 FAM87AP0C7U9 286 aa16.57■□□□□ 0.24
CAPN3-209ENST00000466222 LHX2P50458 406 aa16.57■□□□□ 0.24
CAPN3-209ENST00000466222 GBX2P52951 348 aaPredicted RBP16.57■□□□□ 0.24
CAPN3-209ENST00000466222 MRPL28Q13084 256 aaKnown RBP16.57■□□□□ 0.24
CAPN3-209ENST00000466222 ZNF169Q14929 603 aaPredicted RBP16.57■□□□□ 0.24
CAPN3-209ENST00000466222 HSD17B12Q53GQ0 312 aa16.57■□□□□ 0.24
CAPN3-209ENST00000466222 GPAT4Q86UL3 456 aa16.57■□□□□ 0.24
CAPN3-209ENST00000466222 FAM109AQ8N4B1 249 aa16.57■□□□□ 0.24
CAPN3-209ENST00000466222 ZNRF4Q8WWF5 429 aa16.57■□□□□ 0.24
CAPN3-209ENST00000466222 ZNF845Q96IR2 970 aaPredicted RBP16.57■□□□□ 0.24
CAPN3-209ENST00000466222 ADGRG7Q96K78 797 aa16.57■□□□□ 0.24
CAPN3-209ENST00000466222 TSSK2Q96PF2 358 aa16.57■□□□□ 0.24
CAPN3-209ENST00000466222 C7orf50Q9BRJ6 194 aaKnown RBP16.57■□□□□ 0.24
CAPN3-209ENST00000466222 ZCCHC4Q9H5U6 513 aa16.57■□□□□ 0.24
CAPN3-209ENST00000466222 PLSCR3Q9NRY6 295 aa16.57■□□□□ 0.24
CAPN3-209ENST00000466222 MED29Q9NX70 200 aa16.57■□□□□ 0.24
CAPN3-209ENST00000466222 CACNG2Q9Y698 323 aa16.57■□□□□ 0.24
CAPN3-209ENST00000466222 NOTOA8MTQ0 251 aa16.57■□□□□ 0.24
CAPN3-209ENST00000466222 ARPC3O15145 178 aa16.57■□□□□ 0.24
CAPN3-209ENST00000466222 HOXD11P31277 338 aaPredicted RBP16.57■□□□□ 0.24
CAPN3-209ENST00000466222 EIF1AXP47813 144 aaKnown RBP16.57■□□□□ 0.24
CAPN3-209ENST00000466222 OR12D2P58182 307 aa16.57■□□□□ 0.24
CAPN3-209ENST00000466222 PLEKHN1Q494U1 663 aaPredicted RBP16.57■□□□□ 0.24
CAPN3-209ENST00000466222 MESTQ5EB52 335 aa16.57■□□□□ 0.24
CAPN3-209ENST00000466222 Q6ZS92 163 aa16.57■□□□□ 0.24
CAPN3-209ENST00000466222 GLCCI1Q86VQ1 547 aa16.57■□□□□ 0.24
CAPN3-209ENST00000466222 NPEPL1Q8NDH3 523 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms