RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 SRA1Q9HD15 236 aaKnown RBP17.59■□□□□ 0.41
SKA3-205ENST00000465471 BEX4Q9NWD9 120 aaPredicted RBP17.59■□□□□ 0.41
SKA3-205ENST00000465471 ATP23Q9Y6H3 246 aa17.59■□□□□ 0.41
SKA3-205ENST00000465471 CREBBPQ92793 2442 aa17.58■□□□□ 0.41
SKA3-205ENST00000465471 C12orf71A8MTZ7 269 aa17.58■□□□□ 0.4
SKA3-205ENST00000465471 MPZL1O95297 269 aa17.58■□□□□ 0.4
SKA3-205ENST00000465471 SNAP29O95721 258 aa17.58■□□□□ 0.4
SKA3-205ENST00000465471 GPANK1O95872 356 aa17.58■□□□□ 0.4
SKA3-205ENST00000465471 CD8AP01732 235 aa17.58■□□□□ 0.4
SKA3-205ENST00000465471 POU1F1P28069 291 aa17.58■□□□□ 0.4
SKA3-205ENST00000465471 SLC25A1P53007 311 aa17.58■□□□□ 0.4
SKA3-205ENST00000465471 PPP2R2BQ00005 443 aa17.58■□□□□ 0.4
SKA3-205ENST00000465471 GLO1Q04760 184 aa17.58■□□□□ 0.4
SKA3-205ENST00000465471 AQP6Q13520 282 aa17.58■□□□□ 0.4
SKA3-205ENST00000465471 TESK1Q15569 626 aa17.58■□□□□ 0.4
SKA3-205ENST00000465471 SLC30A7Q8NEW0 376 aa17.58■□□□□ 0.4
SKA3-205ENST00000465471 FOXC2Q99958 501 aa17.58■□□□□ 0.4
SKA3-205ENST00000465471 TRAF4Q9BUZ4 470 aaPredicted RBP17.58■□□□□ 0.4
SKA3-205ENST00000465471 FAIMQ9NVQ4 179 aa17.58■□□□□ 0.4
SKA3-205ENST00000465471 TMEFF2Q9UIK5 374 aaPredicted RBP17.58■□□□□ 0.4
SKA3-205ENST00000465471 TIMM10BQ9Y5J6 103 aa17.58■□□□□ 0.4
SKA3-205ENST00000465471 PRRC2AP48634 2157 aaKnown RBP17.57■□□□□ 0.4
SKA3-205ENST00000465471 RIIAD1A6NNX1 92 aa17.57■□□□□ 0.4
SKA3-205ENST00000465471 OVOL3O00110 214 aa17.57■□□□□ 0.4
SKA3-205ENST00000465471 PTHP01270 115 aa17.57■□□□□ 0.4
SKA3-205ENST00000465471 IFNGP01579 166 aa17.57■□□□□ 0.4
SKA3-205ENST00000465471 TFP02787 698 aa17.57■□□□□ 0.4
SKA3-205ENST00000465471 PAX1P15863 534 aa17.57■□□□□ 0.4
SKA3-205ENST00000465471 NR4A1P22736 598 aa17.57■□□□□ 0.4
SKA3-205ENST00000465471 TTKP33981 857 aa17.57■□□□□ 0.4
SKA3-205ENST00000465471 CRISP1P54107 249 aa17.57■□□□□ 0.4
SKA3-205ENST00000465471 ESRRGP62508 458 aa17.57■□□□□ 0.4
SKA3-205ENST00000465471 HSF2Q03933 536 aa17.57■□□□□ 0.4
SKA3-205ENST00000465471 PLP2Q04941 152 aa17.57■□□□□ 0.4
SKA3-205ENST00000465471 C11orf71Q6IPW1 123 aa17.57■□□□□ 0.4
SKA3-205ENST00000465471 OR2T4Q8NH00 348 aa17.57■□□□□ 0.4
SKA3-205ENST00000465471 ZNRF4Q8WWF5 429 aa17.57■□□□□ 0.4
SKA3-205ENST00000465471 OSBPL10Q9BXB5 764 aa17.57■□□□□ 0.4
SKA3-205ENST00000465471 ZNF442Q9H7R0 627 aa17.57■□□□□ 0.4
SKA3-205ENST00000465471 CA10Q9NS85 328 aa17.57■□□□□ 0.4
SKA3-205ENST00000465471 KRT84Q9NSB2 600 aa17.57■□□□□ 0.4
SKA3-205ENST00000465471 LAMP3Q9UQV4 416 aa17.57■□□□□ 0.4
SKA3-205ENST00000465471 RTTNQ86VV8 2226 aa17.56■□□□□ 0.4
SKA3-205ENST00000465471 IQCMA0A1B0GVH7 501 aa17.56■□□□□ 0.4
SKA3-205ENST00000465471 SAC3D1A6NKF1 404 aa17.56■□□□□ 0.4
SKA3-205ENST00000465471 SURF4O15260 269 aa17.56■□□□□ 0.4
SKA3-205ENST00000465471 MITFO75030 526 aaPredicted RBP17.56■□□□□ 0.4
SKA3-205ENST00000465471 ZNF3P17036 446 aa17.56■□□□□ 0.4
SKA3-205ENST00000465471 APOBEC3AP31941 199 aaPredicted RBP17.56■□□□□ 0.4
SKA3-205ENST00000465471 HIST1H3AP68431 136 aa17.56■□□□□ 0.4
SKA3-205ENST00000465471 SCRN3Q0VDG4 424 aa17.56■□□□□ 0.4
SKA3-205ENST00000465471 MEP1BQ16820 701 aa17.56■□□□□ 0.4
SKA3-205ENST00000465471 HIST2H3PS2Q5TEC6 136 aa17.56■□□□□ 0.4
SKA3-205ENST00000465471 OTPQ5XKR4 325 aa17.56■□□□□ 0.4
SKA3-205ENST00000465471 HIST2H3AQ71DI3 136 aa17.56■□□□□ 0.4
SKA3-205ENST00000465471 PAQR4Q8N4S7 273 aaPredicted RBP17.56■□□□□ 0.4
SKA3-205ENST00000465471 OR9Q1Q8NGQ5 310 aa17.56■□□□□ 0.4
SKA3-205ENST00000465471 AKR7LQ8NHP1 331 aa17.56■□□□□ 0.4
SKA3-205ENST00000465471 TMEM171Q8WVE6 324 aa17.56■□□□□ 0.4
SKA3-205ENST00000465471 POM121L2Q96KW2 1035 aa17.56■□□□□ 0.4
SKA3-205ENST00000465471 MRPL22Q9NWU5 206 aaKnown RBP17.56■□□□□ 0.4
SKA3-205ENST00000465471 LHFPL6Q9Y693 200 aa17.56■□□□□ 0.4
SKA3-205ENST00000465471 FAM171A2A8MVW0 826 aa17.55■□□□□ 0.4
SKA3-205ENST00000465471 HMGN1P05114 100 aa17.55■□□□□ 0.4
SKA3-205ENST00000465471 COX5BP10606 129 aa17.55■□□□□ 0.4
SKA3-205ENST00000465471 SPI1P17947 270 aa17.55■□□□□ 0.4
SKA3-205ENST00000465471 APEX1P27695 318 aaKnown RBP17.55■□□□□ 0.4
SKA3-205ENST00000465471 PYCR1P32322 319 aa17.55■□□□□ 0.4
SKA3-205ENST00000465471 FABP6P51161 128 aa17.55■□□□□ 0.4
SKA3-205ENST00000465471 DAG1Q14118 895 aa17.55■□□□□ 0.4
SKA3-205ENST00000465471 ADIPOQQ15848 244 aa17.55■□□□□ 0.4
SKA3-205ENST00000465471 TBC1D28Q2M2D7 210 aa17.55■□□□□ 0.4
SKA3-205ENST00000465471 AGAP6Q5VW22 663 aa17.55■□□□□ 0.4
SKA3-205ENST00000465471 ZNF774Q6NX45 483 aa17.55■□□□□ 0.4
SKA3-205ENST00000465471 MUC15Q8N387 334 aa17.55■□□□□ 0.4
SKA3-205ENST00000465471 ICA1LQ8NDH6 482 aa17.55■□□□□ 0.4
SKA3-205ENST00000465471 CIB1Q99828 191 aa17.55■□□□□ 0.4
SKA3-205ENST00000465471 HCAR1Q9BXC0 346 aa17.55■□□□□ 0.4
SKA3-205ENST00000465471 CBLN4Q9NTU7 201 aa17.55■□□□□ 0.4
SKA3-205ENST00000465471 ZNF701Q9NV72 531 aaPredicted RBP17.55■□□□□ 0.4
SKA3-205ENST00000465471 ASH2LQ9UBL3 628 aa17.55■□□□□ 0.4
SKA3-205ENST00000465471 LOC100509620A0A075B734 347 aa17.54■□□□□ 0.4
SKA3-205ENST00000465471 ICMTO60725 284 aa17.54■□□□□ 0.4
SKA3-205ENST00000465471 CCL2P13500 99 aa17.54■□□□□ 0.4
SKA3-205ENST00000465471 IGFBP5P24593 272 aa17.54■□□□□ 0.4
SKA3-205ENST00000465471 STOMP27105 288 aa17.54■□□□□ 0.4
SKA3-205ENST00000465471 GGT2P36268 569 aa17.54■□□□□ 0.4
SKA3-205ENST00000465471 TEKQ02763 1124 aa17.54■□□□□ 0.4
SKA3-205ENST00000465471 SNTB2Q13425 540 aaKnown RBP17.54■□□□□ 0.4
SKA3-205ENST00000465471 PTGES3Q15185 160 aaKnown RBP17.54■□□□□ 0.4
SKA3-205ENST00000465471 LINC01590Q5TEZ4 76 aa17.54■□□□□ 0.4
SKA3-205ENST00000465471 TMEM236Q5W0B7 351 aa17.54■□□□□ 0.4
SKA3-205ENST00000465471 KRT80Q6KB66 452 aa17.54■□□□□ 0.4
SKA3-205ENST00000465471 VASH1Q7L8A9 365 aaPredicted RBP17.54■□□□□ 0.4
SKA3-205ENST00000465471 FBXL14Q8N1E6 418 aa17.54■□□□□ 0.4
SKA3-205ENST00000465471 LRRC75A-AS1Q8N1F1 130 aa17.54■□□□□ 0.4
SKA3-205ENST00000465471 PROKR2Q8NFJ6 384 aa17.54■□□□□ 0.4
SKA3-205ENST00000465471 OR1J2Q8NGS2 313 aa17.54■□□□□ 0.4
SKA3-205ENST00000465471 PTP4A1Q93096 173 aa17.54■□□□□ 0.4
SKA3-205ENST00000465471 RBM4BQ9BQ04 359 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms