RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 ZNF585AQ6P3V2 769 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 TSEN54Q7Z6J9 526 aaKnown RBP3.27□□□□□ -1.89
COL8A1-205ENST00000463753 C17orf64Q86WR6 236 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 SULF2Q8IWU5 870 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 FBXO16Q8IX29 292 aaPredicted RBP3.27□□□□□ -1.89
COL8A1-205ENST00000463753 CLECL1Q8IZS7 167 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 KDM8Q8N371 416 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 OR5L2Q8NGL0 311 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 OR5L1Q8NGL2 311 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 OR4C15Q8NGM1 316 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 OR13C8Q8NGS7 320 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 Q8WTZ3 238 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 TMEM174Q8WUU8 243 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 MITD1Q8WV92 249 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 LIPHQ8WWY8 451 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 DYRK2Q92630 601 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 ADIPOR1Q96A54 375 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 SMARCD1Q96GM5 515 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 ZNF582Q96NG8 517 aaPredicted RBP3.27□□□□□ -1.89
COL8A1-205ENST00000463753 ATOH8Q96SQ7 321 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 POLR2J3Q9H1A7 115 aaKnown RBP3.27□□□□□ -1.89
COL8A1-205ENST00000463753 NELFAQ9H3P2 528 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 TPSG1Q9NRR2 321 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 HSF4Q9ULV5 492 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 CBLCQ9ULV8 474 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 FZD10Q9ULW2 581 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 FOXJ3Q9UPW0 622 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 ICKQ9UPZ9 632 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 ANGPT4Q9Y264 503 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 FARSAQ9Y285 508 aaKnown RBP3.27□□□□□ -1.89
COL8A1-205ENST00000463753 NOP16Q9Y3C1 178 aaKnown RBP3.27□□□□□ -1.89
COL8A1-205ENST00000463753 ZNF462Q96JM2 2506 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 NINQ8N4C6 2090 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 PIKFYVEQ9Y2I7 2098 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 KIAA0100Q14667 2235 aaKnown RBP3.26□□□□□ -1.89
COL8A1-205ENST00000463753 TRBV5-3A0A0A0MS03 114 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 C13orf42A0A1B0GVH6 325 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 SLC22A31A6NKX4 558 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 RPL36A-HNRNPH2H7BZ11 118 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 MAN2B1O00754 1011 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 GRM6O15303 877 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 CDC40O60508 579 aaKnown RBP eCLIP3.26□□□□□ -1.89
COL8A1-205ENST00000463753 RAMP1O60894 148 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 RDH16O75452 317 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 REM1O75628 298 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 LCATP04180 440 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 IL5P05113 134 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 C8AP07357 584 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 PRSS56P0CW18 603 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 LIMS3P0CW19 117 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 LIMS4P0CW20 117 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 OSMP13725 252 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 HSD11B1P28845 292 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 ACVRL1P37023 503 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 GPR4P46093 362 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 MTNR1AP48039 350 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 CCR5P51681 352 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 METAP1P53582 386 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 DVL1P1P54792 670 aaPredicted RBP3.26□□□□□ -1.89
COL8A1-205ENST00000463753 PRRX1P54821 245 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 ST8SIA6P61647 398 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 SNRPGP62308 76 aaKnown RBP3.26□□□□□ -1.89
COL8A1-205ENST00000463753 BTN3A2P78410 334 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 SLC6A3Q01959 620 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 SCGB2A2Q13296 93 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 PMS2P11Q13670 270 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 CLEC12AQ5QGZ9 265 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 AGBL4Q5VU57 503 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 CD200R1LQ6Q8B3 271 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 NUFIP2Q7Z417 695 aaKnown RBP3.26□□□□□ -1.89
COL8A1-205ENST00000463753 COMMD1Q8N668 190 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 PNLDC1Q8NA58 520 aaKnown RBP3.26□□□□□ -1.89
COL8A1-205ENST00000463753 TMEM104Q8NE00 496 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 STXBP6Q8NFX7 210 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 SPATA3Q8NHX4 192 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 LGALS14Q8TCE9 139 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 CSGALNACT1Q8TDX6 532 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 SMPDL3BQ92485 455 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 BCL2L2Q92843 193 aaPredicted RBP3.26□□□□□ -1.89
COL8A1-205ENST00000463753 POP5Q969H6 163 aaKnown RBP3.26□□□□□ -1.89
COL8A1-205ENST00000463753 PIK3IP1Q96FE7 263 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 PHB2Q99623 299 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 AARSD1Q9BTE6 412 aaKnown RBP3.26□□□□□ -1.89
COL8A1-205ENST00000463753 RIOK2Q9BVS4 552 aaKnown RBP3.26□□□□□ -1.89
COL8A1-205ENST00000463753 EBPLQ9BY08 206 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 TBL1XR1Q9BZK7 514 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 COMMD4Q9H0A8 199 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 OR10A5Q9H207 317 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 POFUT1Q9H488 388 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 CWH43Q9H720 699 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 ISG20L2Q9H9L3 353 aaKnown RBP3.26□□□□□ -1.89
COL8A1-205ENST00000463753 CHODLQ9H9P2 273 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 LRTM1Q9HBL6 345 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 CSNK1G1Q9HCP0 422 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 B3GAT1Q9P2W7 334 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 NDOR1Q9UHB4 597 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 CAMK2AQ9UQM7 478 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 HDGFL3Q9Y3E1 203 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 ATG4BQ9Y4P1 393 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 UBIAD1Q9Y5Z9 338 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms