RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 DUS3LQ96G46 650 aaKnown RBP13.67□□□□□ -0.22
ERCC3-206ENST00000462306 WACQ9BTA9 647 aa13.67□□□□□ -0.22
ERCC3-206ENST00000462306 TSSK6Q9BXA6 273 aa13.67□□□□□ -0.22
ERCC3-206ENST00000462306 PLK3Q9H4B4 646 aa13.67□□□□□ -0.22
ERCC3-206ENST00000462306 SRA1Q9HD15 236 aaKnown RBP13.67□□□□□ -0.22
ERCC3-206ENST00000462306 DLL4Q9NR61 685 aa13.67□□□□□ -0.22
ERCC3-206ENST00000462306 TBC1D23Q9NUY8 699 aa13.67□□□□□ -0.22
ERCC3-206ENST00000462306 PDP1Q9P0J1 537 aaPredicted RBP13.67□□□□□ -0.22
ERCC3-206ENST00000462306 REV1Q9UBZ9 1251 aa13.67□□□□□ -0.22
ERCC3-206ENST00000462306 B9D1Q9UPM9 204 aa13.67□□□□□ -0.22
ERCC3-206ENST00000462306 SPEF1Q9Y4P9 236 aa13.67□□□□□ -0.22
ERCC3-206ENST00000462306 FLNAP21333 2647 aaKnown RBP13.67□□□□□ -0.22
ERCC3-206ENST00000462306 MED13LQ71F56 2210 aa13.66□□□□□ -0.22
ERCC3-206ENST00000462306 RTTNQ86VV8 2226 aa13.66□□□□□ -0.22
ERCC3-206ENST00000462306 LOC100509620A0A075B734 347 aa13.66□□□□□ -0.22
ERCC3-206ENST00000462306 C12orf71A8MTZ7 269 aa13.66□□□□□ -0.22
ERCC3-206ENST00000462306 E2F6O75461 281 aa13.66□□□□□ -0.22
ERCC3-206ENST00000462306 TIPRLO75663 272 aa13.66□□□□□ -0.22
ERCC3-206ENST00000462306 GPANK1O95872 356 aa13.66□□□□□ -0.22
ERCC3-206ENST00000462306 RENP00797 406 aa13.66□□□□□ -0.22
ERCC3-206ENST00000462306 GAAP10253 952 aa13.66□□□□□ -0.22
ERCC3-206ENST00000462306 PRKACGP22612 351 aa13.66□□□□□ -0.22
ERCC3-206ENST00000462306 STOMP27105 288 aa13.66□□□□□ -0.22
ERCC3-206ENST00000462306 GLRXP35754 106 aa13.66□□□□□ -0.22
ERCC3-206ENST00000462306 LSM6P62312 80 aaKnown RBP13.66□□□□□ -0.22
ERCC3-206ENST00000462306 GALK2Q01415 458 aa13.66□□□□□ -0.22
ERCC3-206ENST00000462306 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.66□□□□□ -0.22
ERCC3-206ENST00000462306 TBC1D28Q2M2D7 210 aa13.66□□□□□ -0.22
ERCC3-206ENST00000462306 OTPQ5XKR4 325 aa13.66□□□□□ -0.22
ERCC3-206ENST00000462306 DNM1P34Q6PK57 102 aa13.66□□□□□ -0.22
ERCC3-206ENST00000462306 ZBTB46Q86UZ6 589 aa13.66□□□□□ -0.22
ERCC3-206ENST00000462306 OR1J2Q8NGS2 313 aa13.66□□□□□ -0.22
ERCC3-206ENST00000462306 OR4Q3Q8NH05 313 aa13.66□□□□□ -0.22
ERCC3-206ENST00000462306 C11orf40Q8WZ69 217 aa13.66□□□□□ -0.22
ERCC3-206ENST00000462306 POM121L2Q96KW2 1035 aa13.66□□□□□ -0.22
ERCC3-206ENST00000462306 Q96MF0 132 aa13.66□□□□□ -0.22
ERCC3-206ENST00000462306 RACGAP1Q9H0H5 632 aa13.66□□□□□ -0.22
ERCC3-206ENST00000462306 CDH20Q9HBT6 801 aa13.66□□□□□ -0.22
ERCC3-206ENST00000462306 RPRD1BQ9NQG5 326 aaKnown RBP13.66□□□□□ -0.22
ERCC3-206ENST00000462306 ARMC1Q9NVT9 282 aa13.66□□□□□ -0.22
ERCC3-206ENST00000462306 PMF1-BGLAPU3KQ54 211 aa13.66□□□□□ -0.22
ERCC3-206ENST00000462306 ACANP16112 2415 aa13.66□□□□□ -0.22
ERCC3-206ENST00000462306 ARFGEF3Q5TH69 2177 aa13.66□□□□□ -0.22
ERCC3-206ENST00000462306 VSTM5A8MXK1 200 aa13.65□□□□□ -0.22
ERCC3-206ENST00000462306 DEAF1O75398 565 aaPredicted RBP13.65□□□□□ -0.22
ERCC3-206ENST00000462306 BMP4P12644 408 aa13.65□□□□□ -0.22
ERCC3-206ENST00000462306 APLNRP35414 380 aa13.65□□□□□ -0.22
ERCC3-206ENST00000462306 SLC36A3Q495N2 470 aa13.65□□□□□ -0.22
ERCC3-206ENST00000462306 ZNF774Q6NX45 483 aa13.65□□□□□ -0.22
ERCC3-206ENST00000462306 DNM1P46Q6ZS02 220 aa13.65□□□□□ -0.22
ERCC3-206ENST00000462306 ALDH16A1Q8IZ83 802 aa13.65□□□□□ -0.22
ERCC3-206ENST00000462306 OR2T33Q8NG76 320 aa13.65□□□□□ -0.22
ERCC3-206ENST00000462306 MRPL24Q96A35 216 aaKnown RBP13.65□□□□□ -0.22
ERCC3-206ENST00000462306 DOK1Q99704 481 aa13.65□□□□□ -0.22
ERCC3-206ENST00000462306 FN3KQ9H479 309 aa13.65□□□□□ -0.22
ERCC3-206ENST00000462306 BARX1Q9HBU1 254 aaPredicted RBP13.65□□□□□ -0.22
ERCC3-206ENST00000462306 BAIAP2Q9UQB8 552 aa13.65□□□□□ -0.22
ERCC3-206ENST00000462306 CMAHPQ9Y471 501 aa13.65□□□□□ -0.22
ERCC3-206ENST00000462306 FKBP7Q9Y680 259 aa13.65□□□□□ -0.22
ERCC3-206ENST00000462306 EBAG9O00559 213 aa13.64□□□□□ -0.23
ERCC3-206ENST00000462306 TFP02787 698 aa13.64□□□□□ -0.23
ERCC3-206ENST00000462306 FAM157BP0CG42 384 aa13.64□□□□□ -0.23
ERCC3-206ENST00000462306 PCSK6P29122 969 aa13.64□□□□□ -0.23
ERCC3-206ENST00000462306 UCP2P55851 309 aa13.64□□□□□ -0.23
ERCC3-206ENST00000462306 RPS23P62266 143 aaKnown RBP13.64□□□□□ -0.23
ERCC3-206ENST00000462306 SNRPD2P62316 118 aaKnown RBP13.64□□□□□ -0.23
ERCC3-206ENST00000462306 AQP6Q13520 282 aa13.64□□□□□ -0.23
ERCC3-206ENST00000462306 RAB35Q15286 201 aa13.64□□□□□ -0.23
ERCC3-206ENST00000462306 MEP1BQ16820 701 aa13.64□□□□□ -0.23
ERCC3-206ENST00000462306 SHQ1Q6PI26 577 aaKnown RBP13.64□□□□□ -0.23
ERCC3-206ENST00000462306 SVOPLQ8N434 492 aa13.64□□□□□ -0.23
ERCC3-206ENST00000462306 CYB561A3Q8NBI2 242 aa13.64□□□□□ -0.23
ERCC3-206ENST00000462306 SLC37A3Q8NCC5 494 aa13.64□□□□□ -0.23
ERCC3-206ENST00000462306 SLC26A10Q8NG04 563 aa13.64□□□□□ -0.23
ERCC3-206ENST00000462306 NRBF2Q96F24 287 aa13.64□□□□□ -0.23
ERCC3-206ENST00000462306 MRPL37Q9BZE1 423 aaKnown RBP13.64□□□□□ -0.23
ERCC3-206ENST00000462306 ASH2LQ9UBL3 628 aa13.64□□□□□ -0.23
ERCC3-206ENST00000462306 AP4S1Q9Y587 144 aa13.64□□□□□ -0.23
ERCC3-206ENST00000462306 C5orf49A4QMS7 147 aa13.63□□□□□ -0.23
ERCC3-206ENST00000462306 TRIM64A6NGJ6 449 aa13.63□□□□□ -0.23
ERCC3-206ENST00000462306 TRIM64BA6NI03 449 aa13.63□□□□□ -0.23
ERCC3-206ENST00000462306 FAM171A2A8MVW0 826 aa13.63□□□□□ -0.23
ERCC3-206ENST00000462306 CIB2O75838 187 aa13.63□□□□□ -0.23
ERCC3-206ENST00000462306 COX5BP10606 129 aa13.63□□□□□ -0.23
ERCC3-206ENST00000462306 ANXA8P13928 327 aa13.63□□□□□ -0.23
ERCC3-206ENST00000462306 FOSL1P15407 271 aa13.63□□□□□ -0.23
ERCC3-206ENST00000462306 CCNOP22674 350 aa13.63□□□□□ -0.23
ERCC3-206ENST00000462306 WNT5AP41221 380 aa13.63□□□□□ -0.23
ERCC3-206ENST00000462306 CENPAP49450 140 aa13.63□□□□□ -0.23
ERCC3-206ENST00000462306 EVX1P49640 407 aa13.63□□□□□ -0.23
ERCC3-206ENST00000462306 PPOXP50336 477 aa13.63□□□□□ -0.23
ERCC3-206ENST00000462306 GDI2P50395 445 aaKnown RBP13.63□□□□□ -0.23
ERCC3-206ENST00000462306 GLO1Q04760 184 aa13.63□□□□□ -0.23
ERCC3-206ENST00000462306 SCRN3Q0VDG4 424 aa13.63□□□□□ -0.23
ERCC3-206ENST00000462306 ATP6AP1Q15904 470 aa13.63□□□□□ -0.23
ERCC3-206ENST00000462306 CLEC12BQ2HXU8 276 aa13.63□□□□□ -0.23
ERCC3-206ENST00000462306 LRP11Q86VZ4 500 aa13.63□□□□□ -0.23
ERCC3-206ENST00000462306 CIARTQ8N365 385 aaPredicted RBP13.63□□□□□ -0.23
ERCC3-206ENST00000462306 TEX47Q8TBZ9 253 aa13.63□□□□□ -0.23
ERCC3-206ENST00000462306 ZNRF4Q8WWF5 429 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms