RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 NANOGP8Q6NSW7 305 aa3.51□□□□□ -1.85
CKAP2-204ENST00000459902 TEX43Q6ZNM6 134 aa3.51□□□□□ -1.85
CKAP2-204ENST00000459902 CDH26Q8IXH8 852 aa3.51□□□□□ -1.85
CKAP2-204ENST00000459902 UBE2J2Q8N2K1 259 aa3.51□□□□□ -1.85
CKAP2-204ENST00000459902 MS4A15Q8N5U1 240 aa3.51□□□□□ -1.85
CKAP2-204ENST00000459902 OR13C2Q8NGS9 318 aa3.51□□□□□ -1.85
CKAP2-204ENST00000459902 LILRB4Q8NHJ6 448 aa3.51□□□□□ -1.85
CKAP2-204ENST00000459902 FAM3DQ96BQ1 224 aa3.51□□□□□ -1.85
CKAP2-204ENST00000459902 PIK3IP1Q96FE7 263 aa3.51□□□□□ -1.85
CKAP2-204ENST00000459902 BCL7BQ9BQE9 202 aa3.51□□□□□ -1.85
CKAP2-204ENST00000459902 KRTAP4-3Q9BYR4 195 aa3.51□□□□□ -1.85
CKAP2-204ENST00000459902 KLHL28Q9NXS3 571 aa3.51□□□□□ -1.85
CKAP2-204ENST00000459902 SMARCA2P51531 1590 aa3.51□□□□□ -1.85
CKAP2-204ENST00000459902 KIF26AQ9ULI4 1882 aaPredicted RBP3.5□□□□□ -1.85
CKAP2-204ENST00000459902 GOLGA6L7A0A1B0GV03 622 aa3.5□□□□□ -1.85
CKAP2-204ENST00000459902 F6UB75 175 aa3.5□□□□□ -1.85
CKAP2-204ENST00000459902 GABARAPO95166 117 aa3.5□□□□□ -1.85
CKAP2-204ENST00000459902 SERPINA3P01011 423 aa3.5□□□□□ -1.85
CKAP2-204ENST00000459902 CISD3P0C7P0 127 aa3.5□□□□□ -1.85
CKAP2-204ENST00000459902 NCF2P19878 526 aaPredicted RBP3.5□□□□□ -1.85
CKAP2-204ENST00000459902 PPIDQ08752 370 aaKnown RBP3.5□□□□□ -1.85
CKAP2-204ENST00000459902 ECH1Q13011 328 aa3.5□□□□□ -1.85
CKAP2-204ENST00000459902 ERCC8Q13216 396 aa3.5□□□□□ -1.85
CKAP2-204ENST00000459902 GINS1Q14691 196 aa3.5□□□□□ -1.85
CKAP2-204ENST00000459902 TGFBIQ15582 683 aa3.5□□□□□ -1.85
CKAP2-204ENST00000459902 HADHQ16836 314 aaKnown RBP3.5□□□□□ -1.85
CKAP2-204ENST00000459902 ABCA11PQ4W5N1 156 aa3.5□□□□□ -1.85
CKAP2-204ENST00000459902 PRAMEF5Q5TYX0 476 aa3.5□□□□□ -1.85
CKAP2-204ENST00000459902 PRAMEF6Q5VXH4 476 aa3.5□□□□□ -1.85
CKAP2-204ENST00000459902 DNAJC24Q6P3W2 148 aa3.5□□□□□ -1.85
CKAP2-204ENST00000459902 PP632Q6XCG6 107 aa3.5□□□□□ -1.85
CKAP2-204ENST00000459902 ZNF836Q6ZNA1 936 aa3.5□□□□□ -1.85
CKAP2-204ENST00000459902 HDDC2Q7Z4H3 204 aa3.5□□□□□ -1.85
CKAP2-204ENST00000459902 BIVMQ86UB2 503 aa3.5□□□□□ -1.85
CKAP2-204ENST00000459902 NKAIN4Q8IVV8 208 aa3.5□□□□□ -1.85
CKAP2-204ENST00000459902 RNF10Q8N5U6 811 aaKnown RBP3.5□□□□□ -1.85
CKAP2-204ENST00000459902 OR1S2Q8NGQ3 325 aa3.5□□□□□ -1.85
CKAP2-204ENST00000459902 RHEBL1Q8TAI7 183 aa3.5□□□□□ -1.85
CKAP2-204ENST00000459902 PIBF1Q8WXW3 757 aa3.5□□□□□ -1.85
CKAP2-204ENST00000459902 C19orf60Q96EN9 201 aa3.5□□□□□ -1.85
CKAP2-204ENST00000459902 SPIN2AQ99865 258 aa3.5□□□□□ -1.85
CKAP2-204ENST00000459902 SPIN2BQ9BPZ2 258 aa3.5□□□□□ -1.85
CKAP2-204ENST00000459902 SPZ1Q9BXG8 430 aa3.5□□□□□ -1.85
CKAP2-204ENST00000459902 TSGA10Q9BZW7 698 aa3.5□□□□□ -1.85
CKAP2-204ENST00000459902 PSTPIP2Q9H939 334 aa3.5□□□□□ -1.85
CKAP2-204ENST00000459902 ISYNA1Q9NPH2 558 aa3.5□□□□□ -1.85
CKAP2-204ENST00000459902 RPRD1BQ9NQG5 326 aaKnown RBP3.5□□□□□ -1.85
CKAP2-204ENST00000459902 ETNK2Q9NVF9 386 aa3.5□□□□□ -1.85
CKAP2-204ENST00000459902 ATPIF1Q9UII2 106 aa3.5□□□□□ -1.85
CKAP2-204ENST00000459902 PSME2Q9UL46 239 aa3.5□□□□□ -1.85
CKAP2-204ENST00000459902 ZNF835Q9Y2P0 537 aa3.5□□□□□ -1.85
CKAP2-204ENST00000459902 C15orf41Q9Y2V0 281 aa3.5□□□□□ -1.85
CKAP2-204ENST00000459902 ATP6V1DQ9Y5K8 247 aa3.5□□□□□ -1.85
CKAP2-204ENST00000459902 CNTNAP1P78357 1384 aa3.5□□□□□ -1.85
CKAP2-204ENST00000459902 GPATCH8Q9UKJ3 1502 aaKnown RBP3.49□□□□□ -1.85
CKAP2-204ENST00000459902 IGHV3-74A0A0B4J1X5 117 aa3.49□□□□□ -1.85
CKAP2-204ENST00000459902 GOLGA6L19H0YKK7 550 aa3.49□□□□□ -1.85
CKAP2-204ENST00000459902 AIFM1O95831 613 aa3.49□□□□□ -1.85
CKAP2-204ENST00000459902 CST1P01037 141 aa3.49□□□□□ -1.85
CKAP2-204ENST00000459902 UBTFL6P0CB48 400 aaPredicted RBP3.49□□□□□ -1.85
CKAP2-204ENST00000459902 CALM1P0DP23 149 aa3.49□□□□□ -1.85
CKAP2-204ENST00000459902 CALM2P0DP24 149 aa3.49□□□□□ -1.85
CKAP2-204ENST00000459902 CALM3P0DP25 149 aa3.49□□□□□ -1.85
CKAP2-204ENST00000459902 HNRNPH3P31942 346 aaKnown RBP3.49□□□□□ -1.85
CKAP2-204ENST00000459902 CSNK1A1P48729 337 aa3.49□□□□□ -1.85
CKAP2-204ENST00000459902 B2MP61769 119 aa3.49□□□□□ -1.85
CKAP2-204ENST00000459902 ACTG2P63267 376 aa3.49□□□□□ -1.85
CKAP2-204ENST00000459902 CLINT1Q14677 625 aa3.49□□□□□ -1.85
CKAP2-204ENST00000459902 CLEC2AQ6UVW9 174 aa3.49□□□□□ -1.85
CKAP2-204ENST00000459902 CD302Q8IX05 232 aa3.49□□□□□ -1.85
CKAP2-204ENST00000459902 EID2Q8N6I1 236 aa3.49□□□□□ -1.85
CKAP2-204ENST00000459902 OR10R2Q8NGX6 335 aa3.49□□□□□ -1.85
CKAP2-204ENST00000459902 CXorf40AQ8TE69 158 aa3.49□□□□□ -1.85
CKAP2-204ENST00000459902 CREB3L1Q96BA8 519 aa3.49□□□□□ -1.85
CKAP2-204ENST00000459902 PDXPQ96GD0 296 aa3.49□□□□□ -1.85
CKAP2-204ENST00000459902 SIKE1Q9BRV8 207 aa3.49□□□□□ -1.85
CKAP2-204ENST00000459902 EMC3Q9P0I2 261 aa3.49□□□□□ -1.85
CKAP2-204ENST00000459902 GMEB1Q9Y692 573 aa3.49□□□□□ -1.85
CKAP2-204ENST00000459902 PCM1Q15154 2024 aa3.48□□□□□ -1.85
CKAP2-204ENST00000459902 IGHV5-10-1A0A0J9YXX1 117 aa3.48□□□□□ -1.85
CKAP2-204ENST00000459902 NCF1BA6NI72 391 aaPredicted RBP3.48□□□□□ -1.85
CKAP2-204ENST00000459902 NCF1CA8MVU1 366 aaPredicted RBP3.48□□□□□ -1.85
CKAP2-204ENST00000459902 NDUFS8O00217 210 aa3.48□□□□□ -1.85
CKAP2-204ENST00000459902 BET1O15155 118 aa3.48□□□□□ -1.85
CKAP2-204ENST00000459902 SULT1B1O43704 296 aa3.48□□□□□ -1.85
CKAP2-204ENST00000459902 RAB3DO95716 219 aa3.48□□□□□ -1.85
CKAP2-204ENST00000459902 SLC2A3P11169 496 aa3.48□□□□□ -1.85
CKAP2-204ENST00000459902 PSMC3P17980 439 aa3.48□□□□□ -1.85
CKAP2-204ENST00000459902 NAMPTP43490 491 aa3.48□□□□□ -1.85
CKAP2-204ENST00000459902 MAP3K7CLP57077 242 aa3.48□□□□□ -1.85
CKAP2-204ENST00000459902 CARD18P57730 90 aa3.48□□□□□ -1.85
CKAP2-204ENST00000459902 ESRRGP62508 458 aa3.48□□□□□ -1.85
CKAP2-204ENST00000459902 DDX39BQ13838 428 aaKnown RBP3.48□□□□□ -1.85
CKAP2-204ENST00000459902 ANKRD22Q5VYY1 191 aa3.48□□□□□ -1.85
CKAP2-204ENST00000459902 Q5W150 140 aa3.48□□□□□ -1.85
CKAP2-204ENST00000459902 PDPK2PQ6A1A2 396 aa3.48□□□□□ -1.85
CKAP2-204ENST00000459902 NIPA1Q7RTP0 329 aa3.48□□□□□ -1.85
CKAP2-204ENST00000459902 OAFQ86UD1 273 aa3.48□□□□□ -1.85
CKAP2-204ENST00000459902 COMTD1Q86VU5 262 aa3.48□□□□□ -1.85
CKAP2-204ENST00000459902 FBXO32Q969P5 355 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms