RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 C12orf71A8MTZ7 269 aa16.09■□□□□ 0.17
USP39-209ENST00000458268 DNAJC8O75937 253 aaPredicted RBP16.09■□□□□ 0.17
USP39-209ENST00000458268 MPZL1O95297 269 aa16.09■□□□□ 0.17
USP39-209ENST00000458268 SOX14O95416 240 aa16.09■□□□□ 0.17
USP39-209ENST00000458268 CST1P01037 141 aa16.09■□□□□ 0.17
USP39-209ENST00000458268 ERCC1P07992 297 aaPredicted RBP16.09■□□□□ 0.17
USP39-209ENST00000458268 RAP2AP10114 183 aa16.09■□□□□ 0.17
USP39-209ENST00000458268 GLRXP35754 106 aa16.09■□□□□ 0.17
USP39-209ENST00000458268 GSSP48637 474 aa16.09■□□□□ 0.17
USP39-209ENST00000458268 PCBD1P61457 104 aa16.09■□□□□ 0.17
USP39-209ENST00000458268 TRAP1Q12931 704 aaKnown RBP16.09■□□□□ 0.17
USP39-209ENST00000458268 ENDOGQ14249 297 aaKnown RBP16.09■□□□□ 0.17
USP39-209ENST00000458268 NKPD1Q17RQ9 610 aa16.09■□□□□ 0.17
USP39-209ENST00000458268 C1orf94Q6P1W5 598 aa16.09■□□□□ 0.17
USP39-209ENST00000458268 ZNF620Q6ZNG0 422 aa16.09■□□□□ 0.17
USP39-209ENST00000458268 ALDH16A1Q8IZ83 802 aa16.09■□□□□ 0.17
USP39-209ENST00000458268 ADGRG5Q8IZF4 528 aa16.09■□□□□ 0.17
USP39-209ENST00000458268 OR4C15Q8NGM1 316 aa16.09■□□□□ 0.17
USP39-209ENST00000458268 CANT1Q8WVQ1 401 aa16.09■□□□□ 0.17
USP39-209ENST00000458268 SLC7A6OSQ96CW6 309 aaPredicted RBP16.09■□□□□ 0.17
USP39-209ENST00000458268 NMNAT3Q96T66 252 aa16.09■□□□□ 0.17
USP39-209ENST00000458268 CHID1Q9BWS9 393 aa16.09■□□□□ 0.17
USP39-209ENST00000458268 WNT5BQ9H1J7 359 aa16.09■□□□□ 0.17
USP39-209ENST00000458268 RPRD1BQ9NQG5 326 aaKnown RBP16.09■□□□□ 0.17
USP39-209ENST00000458268 MYEF2Q9P2K5 600 aaKnown RBP16.09■□□□□ 0.17
USP39-209ENST00000458268 TIMM10BQ9Y5J6 103 aa16.09■□□□□ 0.17
USP39-209ENST00000458268 TMEM129A0AVI4 362 aa16.08■□□□□ 0.16
USP39-209ENST00000458268 FAM171A2A8MVW0 826 aa16.08■□□□□ 0.16
USP39-209ENST00000458268 M0R233 179 aa16.08■□□□□ 0.16
USP39-209ENST00000458268 ACOT8O14734 319 aa16.08■□□□□ 0.16
USP39-209ENST00000458268 DOK2O60496 412 aa16.08■□□□□ 0.16
USP39-209ENST00000458268 CLPTM1O96005 669 aa16.08■□□□□ 0.16
USP39-209ENST00000458268 F12P00748 615 aaPredicted RBP16.08■□□□□ 0.16
USP39-209ENST00000458268 GASTP01350 101 aa16.08■□□□□ 0.16
USP39-209ENST00000458268 HIST1H1CP16403 213 aaKnown RBP16.08■□□□□ 0.16
USP39-209ENST00000458268 PPOXP50336 477 aa16.08■□□□□ 0.16
USP39-209ENST00000458268 MEP1BQ16820 701 aa16.08■□□□□ 0.16
USP39-209ENST00000458268 DNM1P34Q6PK57 102 aa16.08■□□□□ 0.16
USP39-209ENST00000458268 OR52E2Q8NGJ4 325 aa16.08■□□□□ 0.16
USP39-209ENST00000458268 OR1J1Q8NGS3 322 aa16.08■□□□□ 0.16
USP39-209ENST00000458268 DOK1Q99704 481 aa16.08■□□□□ 0.16
USP39-209ENST00000458268 VSX1Q9NZR4 365 aaPredicted RBP16.08■□□□□ 0.16
USP39-209ENST00000458268 EIF3KQ9UBQ5 218 aaKnown RBP16.08■□□□□ 0.16
USP39-209ENST00000458268 CDH10Q9Y6N8 788 aa16.08■□□□□ 0.16
USP39-209ENST00000458268 RTTNQ86VV8 2226 aa16.08■□□□□ 0.16
USP39-209ENST00000458268 AHCYL1O43865 530 aa16.07■□□□□ 0.16
USP39-209ENST00000458268 E2F6O75461 281 aa16.07■□□□□ 0.16
USP39-209ENST00000458268 HLA-DQA2P01906 255 aa16.07■□□□□ 0.16
USP39-209ENST00000458268 IGFBP1P08833 259 aaPredicted RBP16.07■□□□□ 0.16
USP39-209ENST00000458268 RAD52P43351 418 aa16.07■□□□□ 0.16
USP39-209ENST00000458268 HTR5AP47898 357 aa16.07■□□□□ 0.16
USP39-209ENST00000458268 PDLIM4P50479 330 aa16.07■□□□□ 0.16
USP39-209ENST00000458268 SELENOVP59797 346 aa16.07■□□□□ 0.16
USP39-209ENST00000458268 FOXL2NBQ6ZUU3 175 aa16.07■□□□□ 0.16
USP39-209ENST00000458268 GLB1L2Q8IW92 636 aa16.07■□□□□ 0.16
USP39-209ENST00000458268 LINC00471Q8N535 108 aa16.07■□□□□ 0.16
USP39-209ENST00000458268 OR10G2Q8NGC3 310 aa16.07■□□□□ 0.16
USP39-209ENST00000458268 ABHD4Q8TB40 342 aa16.07■□□□□ 0.16
USP39-209ENST00000458268 PLA2G12AQ9BZM1 189 aa16.07■□□□□ 0.16
USP39-209ENST00000458268 TAAR3PQ9P1P4 343 aa16.07■□□□□ 0.16
USP39-209ENST00000458268 ASH2LQ9UBL3 628 aa16.07■□□□□ 0.16
USP39-209ENST00000458268 REV1Q9UBZ9 1251 aa16.07■□□□□ 0.16
USP39-209ENST00000458268 CHD3Q12873 2000 aaKnown RBP16.07■□□□□ 0.16
USP39-209ENST00000458268 LOC100509620A0A075B734 347 aa16.06■□□□□ 0.16
USP39-209ENST00000458268 AQP12BA6NM10 295 aa16.06■□□□□ 0.16
USP39-209ENST00000458268 DCTN6O00399 190 aa16.06■□□□□ 0.16
USP39-209ENST00000458268 SYNGR3O43761 229 aa16.06■□□□□ 0.16
USP39-209ENST00000458268 TXNDC12O95881 172 aa16.06■□□□□ 0.16
USP39-209ENST00000458268 TP53P04637 393 aaPredicted RBP16.06■□□□□ 0.16
USP39-209ENST00000458268 HEXAP06865 529 aa16.06■□□□□ 0.16
USP39-209ENST00000458268 NAT2P11245 290 aa16.06■□□□□ 0.16
USP39-209ENST00000458268 PCSK6P29122 969 aa16.06■□□□□ 0.16
USP39-209ENST00000458268 CRABP1P29762 137 aa16.06■□□□□ 0.16
USP39-209ENST00000458268 UCP2P55851 309 aa16.06■□□□□ 0.16
USP39-209ENST00000458268 KLF3P57682 345 aaPredicted RBP16.06■□□□□ 0.16
USP39-209ENST00000458268 DSCR9P59020 149 aa16.06■□□□□ 0.16
USP39-209ENST00000458268 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.06■□□□□ 0.16
USP39-209ENST00000458268 SCRN3Q0VDG4 424 aa16.06■□□□□ 0.16
USP39-209ENST00000458268 GGTLC2Q14390 218 aa16.06■□□□□ 0.16
USP39-209ENST00000458268 MICAQ29983 383 aa16.06■□□□□ 0.16
USP39-209ENST00000458268 AQP12AQ8IXF9 295 aa16.06■□□□□ 0.16
USP39-209ENST00000458268 CYB561A3Q8NBI2 242 aa16.06■□□□□ 0.16
USP39-209ENST00000458268 OR10H5Q8NGA6 315 aa16.06■□□□□ 0.16
USP39-209ENST00000458268 SYNPRQ8TBG9 265 aa16.06■□□□□ 0.16
USP39-209ENST00000458268 C11orf40Q8WZ69 217 aa16.06■□□□□ 0.16
USP39-209ENST00000458268 PIMREGQ9BSJ6 248 aa16.06■□□□□ 0.16
USP39-209ENST00000458268 TSSK6Q9BXA6 273 aa16.06■□□□□ 0.16
USP39-209ENST00000458268 CADM1Q9BY67 442 aaKnown RBP16.06■□□□□ 0.16
USP39-209ENST00000458268 BCL2L14Q9BZR8 327 aa16.06■□□□□ 0.16
USP39-209ENST00000458268 ARMC1Q9NVT9 282 aa16.06■□□□□ 0.16
USP39-209ENST00000458268 PLEK2Q9NYT0 353 aa16.06■□□□□ 0.16
USP39-209ENST00000458268 POMPQ9Y244 141 aa16.06■□□□□ 0.16
USP39-209ENST00000458268 LYNX1G3V0Z9 82 aa16.05■□□□□ 0.16
USP39-209ENST00000458268 GSC2O15499 205 aa16.05■□□□□ 0.16
USP39-209ENST00000458268 SGCEO43556 437 aa16.05■□□□□ 0.16
USP39-209ENST00000458268 SNAP29O95721 258 aa16.05■□□□□ 0.16
USP39-209ENST00000458268 LYNX1P0DP58 116 aa16.05■□□□□ 0.16
USP39-209ENST00000458268 APEHP13798 732 aaKnown RBP16.05■□□□□ 0.16
USP39-209ENST00000458268 WNT5AP41221 380 aa16.05■□□□□ 0.16
USP39-209ENST00000458268 HMGA2P52926 109 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms