RNA–Protein interactions for RNA: ENST00000456816.5

LINC00887-204, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 796 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-204ENST00000456816 ZNF593O00488 134 aaPredicted RBP12.36□□□□□ -0.43
LINC00887-204ENST00000456816 SELENOFO60613 162 aa12.36□□□□□ -0.43
LINC00887-204ENST00000456816 FAM20BO75063 409 aa12.36□□□□□ -0.43
LINC00887-204ENST00000456816 APOL3O95236 402 aa12.36□□□□□ -0.43
LINC00887-204ENST00000456816 PATE4P0C8F1 98 aa12.36□□□□□ -0.43
LINC00887-204ENST00000456816 PEX19P40855 299 aa12.36□□□□□ -0.43
LINC00887-204ENST00000456816 MTNR1AP48039 350 aa12.36□□□□□ -0.43
LINC00887-204ENST00000456816 LSM6P62312 80 aaKnown RBP12.36□□□□□ -0.43
LINC00887-204ENST00000456816 POU4F2Q12837 409 aa12.36□□□□□ -0.43
LINC00887-204ENST00000456816 CDK5R2Q13319 367 aa12.36□□□□□ -0.43
LINC00887-204ENST00000456816 TMED1Q13445 227 aa12.36□□□□□ -0.43
LINC00887-204ENST00000456816 AQP6Q13520 282 aa12.36□□□□□ -0.43
LINC00887-204ENST00000456816 ENDOGQ14249 297 aaKnown RBP12.36□□□□□ -0.43
LINC00887-204ENST00000456816 KCNMB1Q16558 191 aa12.36□□□□□ -0.43
LINC00887-204ENST00000456816 SMN1Q16637 294 aaKnown RBP12.36□□□□□ -0.43
LINC00887-204ENST00000456816 GSG1Q2KHT4 349 aa12.36□□□□□ -0.43
LINC00887-204ENST00000456816 LINC00346Q8IVM7 164 aa12.36□□□□□ -0.43
LINC00887-204ENST00000456816 APH1BQ8WW43 257 aa12.36□□□□□ -0.43
LINC00887-204ENST00000456816 C1QTNF6Q9BXI9 259 aa12.36□□□□□ -0.43
LINC00887-204ENST00000456816 AMBNQ9NP70 447 aa12.36□□□□□ -0.43
LINC00887-204ENST00000456816 NPDC1Q9NQX5 325 aaPredicted RBP12.36□□□□□ -0.43
LINC00887-204ENST00000456816 MRPL22Q9NWU5 206 aaKnown RBP12.36□□□□□ -0.43
LINC00887-204ENST00000456816 HELZ2Q9BYK8 2649 aaKnown RBP12.36□□□□□ -0.43
LINC00887-204ENST00000456816 PCNX1Q96RV3 2341 aa12.36□□□□□ -0.43
LINC00887-204ENST00000456816 UBR5O95071 2799 aaPredicted RBP12.35□□□□□ -0.43
LINC00887-204ENST00000456816 ARPC4-TTLL3A0A0A6YYG9 625 aa12.35□□□□□ -0.43
LINC00887-204ENST00000456816 CASKO14936 926 aa12.35□□□□□ -0.43
LINC00887-204ENST00000456816 WBP4O75554 376 aaKnown RBP12.35□□□□□ -0.43
LINC00887-204ENST00000456816 ARR3P36575 388 aa12.35□□□□□ -0.43
LINC00887-204ENST00000456816 RPS27P42677 84 aaKnown RBP12.35□□□□□ -0.43
LINC00887-204ENST00000456816 PLP2Q04941 152 aa12.35□□□□□ -0.43
LINC00887-204ENST00000456816 ZNF91Q05481 1191 aa12.35□□□□□ -0.43
LINC00887-204ENST00000456816 SCRN3Q0VDG4 424 aa12.35□□□□□ -0.43
LINC00887-204ENST00000456816 MED21Q13503 144 aa12.35□□□□□ -0.43
LINC00887-204ENST00000456816 EIF2B1Q14232 305 aaKnown RBP12.35□□□□□ -0.43
LINC00887-204ENST00000456816 TAB1Q15750 504 aa12.35□□□□□ -0.43
LINC00887-204ENST00000456816 TMEM154Q6P9G4 183 aa12.35□□□□□ -0.43
LINC00887-204ENST00000456816 CORO6Q6QEF8 472 aa12.35□□□□□ -0.43
LINC00887-204ENST00000456816 SHFQ7M4L6 423 aa12.35□□□□□ -0.43
LINC00887-204ENST00000456816 SLC16A9Q7RTY1 509 aa12.35□□□□□ -0.43
LINC00887-204ENST00000456816 MDP1Q86V88 176 aa12.35□□□□□ -0.43
LINC00887-204ENST00000456816 WDR31Q8NA23 367 aa12.35□□□□□ -0.43
LINC00887-204ENST00000456816 BPIFB6Q8NFQ5 453 aa12.35□□□□□ -0.43
LINC00887-204ENST00000456816 LINC01560Q8TB33 94 aa12.35□□□□□ -0.43
LINC00887-204ENST00000456816 FBXO17Q96EF6 278 aa12.35□□□□□ -0.43
LINC00887-204ENST00000456816 WFIKKN1Q96NZ8 548 aa12.35□□□□□ -0.43
LINC00887-204ENST00000456816 LAMP5Q9UJQ1 280 aa12.35□□□□□ -0.43
LINC00887-204ENST00000456816 TIMM10BQ9Y5J6 103 aa12.35□□□□□ -0.43
LINC00887-204ENST00000456816 KLF2Q9Y5W3 355 aaPredicted RBP12.35□□□□□ -0.43
LINC00887-204ENST00000456816 GCN1Q92616 2671 aaKnown RBP12.35□□□□□ -0.43
LINC00887-204ENST00000456816 FREM1Q5H8C1 2179 aa12.35□□□□□ -0.43
LINC00887-204ENST00000456816 IQCMA0A1B0GVH7 501 aa12.34□□□□□ -0.43
LINC00887-204ENST00000456816 CLEC18AA5D8T8 446 aa12.34□□□□□ -0.43
LINC00887-204ENST00000456816 M0R1B8 84 aa12.34□□□□□ -0.43
LINC00887-204ENST00000456816 DENRO43583 198 aaKnown RBP12.34□□□□□ -0.43
LINC00887-204ENST00000456816 DBTP11182 482 aaKnown RBP12.34□□□□□ -0.43
LINC00887-204ENST00000456816 ZNF32P17041 273 aa12.34□□□□□ -0.43
LINC00887-204ENST00000456816 KIR2DL3P43628 341 aa12.34□□□□□ -0.43
LINC00887-204ENST00000456816 ZNF83P51522 516 aa12.34□□□□□ -0.43
LINC00887-204ENST00000456816 RAB1AP62820 205 aa12.34□□□□□ -0.43
LINC00887-204ENST00000456816 GGTLC2Q14390 218 aa12.34□□□□□ -0.43
LINC00887-204ENST00000456816 SLC18B1Q6NT16 456 aa12.34□□□□□ -0.43
LINC00887-204ENST00000456816 CLEC18BQ6UXF7 455 aa12.34□□□□□ -0.43
LINC00887-204ENST00000456816 MEX3BQ6ZN04 569 aaKnown RBP12.34□□□□□ -0.43
LINC00887-204ENST00000456816 SSX8Q7RTT4 187 aa12.34□□□□□ -0.43
LINC00887-204ENST00000456816 DPY19L4Q7Z388 723 aa12.34□□□□□ -0.43
LINC00887-204ENST00000456816 SLC35F2Q8IXU6 374 aa12.34□□□□□ -0.43
LINC00887-204ENST00000456816 TIGD4Q8IY51 512 aa12.34□□□□□ -0.43
LINC00887-204ENST00000456816 ALDH16A1Q8IZ83 802 aa12.34□□□□□ -0.43
LINC00887-204ENST00000456816 ZNF786Q8N393 782 aa12.34□□□□□ -0.43
LINC00887-204ENST00000456816 CLEC18CQ8NCF0 446 aa12.34□□□□□ -0.43
LINC00887-204ENST00000456816 GJC3Q8NFK1 279 aa12.34□□□□□ -0.43
LINC00887-204ENST00000456816 OR10H4Q8NGA5 316 aa12.34□□□□□ -0.43
LINC00887-204ENST00000456816 THEM6Q8WUY1 208 aa12.34□□□□□ -0.43
LINC00887-204ENST00000456816 BOD1Q96IK1 185 aa12.34□□□□□ -0.43
LINC00887-204ENST00000456816 WACQ9BTA9 647 aa12.34□□□□□ -0.43
LINC00887-204ENST00000456816 YIPF3Q9GZM5 350 aa12.34□□□□□ -0.43
LINC00887-204ENST00000456816 MARCH7Q9H992 704 aa12.34□□□□□ -0.43
LINC00887-204ENST00000456816 MOV10Q9HCE1 1003 aaKnown RBP12.34□□□□□ -0.43
LINC00887-204ENST00000456816 NGBQ9NPG2 151 aa12.34□□□□□ -0.43
LINC00887-204ENST00000456816 SCN3BQ9NY72 215 aa12.34□□□□□ -0.43
LINC00887-204ENST00000456816 HAO2Q9NYQ3 351 aa12.34□□□□□ -0.43
LINC00887-204ENST00000456816 PLEK2Q9NYT0 353 aa12.34□□□□□ -0.43
LINC00887-204ENST00000456816 GDF2Q9UK05 429 aaPredicted RBP12.34□□□□□ -0.43
LINC00887-204ENST00000456816 SLC25A15Q9Y619 301 aa12.34□□□□□ -0.43
LINC00887-204ENST00000456816 LHFPL6Q9Y693 200 aa12.34□□□□□ -0.43
LINC00887-204ENST00000456816 IRGMA1A4Y4 181 aa12.33□□□□□ -0.44
LINC00887-204ENST00000456816 ZNF670-ZNF695F2Z2N8 137 aa12.33□□□□□ -0.44
LINC00887-204ENST00000456816 C19orf84I3L1E1 186 aa12.33□□□□□ -0.44
LINC00887-204ENST00000456816 RER1O15258 196 aa12.33□□□□□ -0.44
LINC00887-204ENST00000456816 SGCEO43556 437 aa12.33□□□□□ -0.44
LINC00887-204ENST00000456816 XPNPEP2O43895 674 aa12.33□□□□□ -0.44
LINC00887-204ENST00000456816 DOK2O60496 412 aa12.33□□□□□ -0.44
LINC00887-204ENST00000456816 FADS2O95864 444 aaKnown RBP12.33□□□□□ -0.44
LINC00887-204ENST00000456816 SBK2P0C263 348 aa12.33□□□□□ -0.44
LINC00887-204ENST00000456816 IDH3GP51553 393 aaPredicted RBP12.33□□□□□ -0.44
LINC00887-204ENST00000456816 RAB39AQ14964 217 aa12.33□□□□□ -0.44
LINC00887-204ENST00000456816 TAF13Q15543 124 aa12.33□□□□□ -0.44
LINC00887-204ENST00000456816 KLHL22Q53GT1 634 aa12.33□□□□□ -0.44
LINC00887-204ENST00000456816 PABPC1L2AQ5JQF8 200 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms