RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 NSMAFQ92636 917 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 ZNF578Q96N58 590 aaPredicted RBP11.17□□□□□ -0.62
LINC00959-201ENST00000456581 OR6C1Q96RD1 312 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 LPAR4Q99677 370 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 ADAT1Q9BUB4 502 aaKnown RBP11.17□□□□□ -0.62
LINC00959-201ENST00000456581 PTDSS2Q9BVG9 487 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 SLC7A5P2Q9GIP4 190 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 ACOT7O00154 380 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 SCDO00767 359 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 PDCD5O14737 125 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 ZNF354AO60765 605 aaPredicted RBP11.17□□□□□ -0.62
LINC00959-201ENST00000456581 IL33O95760 270 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 ABHD16AO95870 558 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 GIPP09681 153 aaPredicted RBP11.17□□□□□ -0.62
LINC00959-201ENST00000456581 GPR143P51810 404 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 IKZF1Q13422 519 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 ZNF273Q14593 569 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 ATXN7L3Q14CW9 347 aaPredicted RBP11.17□□□□□ -0.62
LINC00959-201ENST00000456581 LPAL2Q16609 132 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 C4orf46Q504U0 113 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 ELFN2Q5R3F8 820 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 OLFML2AQ68BL7 652 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 ZNF660Q6AZW8 331 aaPredicted RBP11.17□□□□□ -0.62
LINC00959-201ENST00000456581 ASPHD2Q6ICH7 369 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 BAIAP2L2Q6UXY1 529 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 FAM122BQ7Z309 247 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 ESX1Q8N693 406 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 SLC46A1Q96NT5 459 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 TSPAN32Q96QS1 320 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 LAMP5Q9UJQ1 280 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 MMACHCQ9Y4U1 282 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 ADAMTS20P59510 1910 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 URB1O60287 2271 aaKnown RBP11.17□□□□□ -0.62
LINC00959-201ENST00000456581 CCSO14618 274 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 HCRTR2O43614 444 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 GPRIN2O60269 458 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 S100A11P31949 105 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 KIR3DL2P43630 455 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 POU3F4P49335 361 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 RPS4XP62701 263 aaKnown RBP11.17□□□□□ -0.62
LINC00959-201ENST00000456581 RPL18Q07020 188 aaKnown RBP11.17□□□□□ -0.62
LINC00959-201ENST00000456581 ELAVL1Q15717 326 aaKnown RBP11.17□□□□□ -0.62
LINC00959-201ENST00000456581 LIN54Q6MZP7 749 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 SLC36A1Q7Z2H8 476 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 FAM220AQ7Z4H9 259 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 EID2Q8N6I1 236 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 OR2G2Q8NGZ5 317 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 STT3BQ8TCJ2 826 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 TNFAIP8L1Q8WVP5 186 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 NECAB3Q96P71 396 aaPredicted RBP11.17□□□□□ -0.62
LINC00959-201ENST00000456581 PPA2Q9H2U2 334 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 SMOC1Q9H4F8 434 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 OR4C45A6NMZ5 311 aa11.16□□□□□ -0.62
LINC00959-201ENST00000456581 PRAF2O60831 178 aa11.16□□□□□ -0.62
LINC00959-201ENST00000456581 CTAG2O75638 210 aa11.16□□□□□ -0.62
LINC00959-201ENST00000456581 PNPP00491 289 aa11.16□□□□□ -0.62
LINC00959-201ENST00000456581 HLA-DQA2P01906 255 aa11.16□□□□□ -0.62
LINC00959-201ENST00000456581 AP3S2P59780 193 aa11.16□□□□□ -0.62
LINC00959-201ENST00000456581 ZNF117Q03924 483 aa11.16□□□□□ -0.62
LINC00959-201ENST00000456581 ZNF74Q16587 644 aa11.16□□□□□ -0.62
LINC00959-201ENST00000456581 LCN10Q6JVE6 187 aa11.16□□□□□ -0.62
LINC00959-201ENST00000456581 WDR74Q6RFH5 385 aaPredicted RBP11.16□□□□□ -0.62
LINC00959-201ENST00000456581 TSEN15Q8WW01 171 aaKnown RBP11.16□□□□□ -0.62
LINC00959-201ENST00000456581 PELOQ9BRX2 385 aaKnown RBP11.16□□□□□ -0.62
LINC00959-201ENST00000456581 CGGBP1Q9UFW8 167 aaPredicted RBP11.16□□□□□ -0.62
LINC00959-201ENST00000456581 CACNA1HO95180 2353 aa11.16□□□□□ -0.62
LINC00959-201ENST00000456581 ZNF264O43296 627 aa11.16□□□□□ -0.62
LINC00959-201ENST00000456581 RBBP9O75884 186 aa11.16□□□□□ -0.62
LINC00959-201ENST00000456581 OR2A4O95047 310 aa11.16□□□□□ -0.62
LINC00959-201ENST00000456581 NUDT14O95848 222 aa11.16□□□□□ -0.62
LINC00959-201ENST00000456581 HIST1H2ABP04908 130 aa11.16□□□□□ -0.62
LINC00959-201ENST00000456581 GABRA1P14867 456 aa11.16□□□□□ -0.62
LINC00959-201ENST00000456581 WDR38Q5JTN6 314 aa11.16□□□□□ -0.62
LINC00959-201ENST00000456581 PMS2CLQ68D20 193 aa11.16□□□□□ -0.62
LINC00959-201ENST00000456581 HIST3H2AQ7L7L0 130 aa11.16□□□□□ -0.62
LINC00959-201ENST00000456581 SPICQ8N5J4 248 aa11.16□□□□□ -0.62
LINC00959-201ENST00000456581 ZNF563Q8TA94 476 aa11.16□□□□□ -0.62
LINC00959-201ENST00000456581 SAP25Q8TEE9 199 aa11.16□□□□□ -0.62
LINC00959-201ENST00000456581 HIST1H2ACQ93077 130 aa11.16□□□□□ -0.62
LINC00959-201ENST00000456581 MVB12AQ96EY5 273 aa11.16□□□□□ -0.62
LINC00959-201ENST00000456581 ZNF75AQ96N20 296 aa11.16□□□□□ -0.62
LINC00959-201ENST00000456581 OR2A7Q96R45 310 aa11.16□□□□□ -0.62
LINC00959-201ENST00000456581 ZNF768Q9H5H4 540 aaKnown RBP11.16□□□□□ -0.62
LINC00959-201ENST00000456581 NUP210LQ5VU65 1888 aa11.16□□□□□ -0.62
LINC00959-201ENST00000456581 RALGAPA1Q6GYQ0 2036 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 TOR1AO14656 332 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 RP2O75695 350 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 GUSBP08236 651 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 ABCD3P28288 659 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 TACR3P29371 465 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 GRK6P43250 576 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 RAP2BP61225 183 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 HLA-DQA1Q5Y7H0 255 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 TMEM71Q6P5X7 295 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 ATG4DQ86TL0 474 aaPredicted RBP11.15□□□□□ -0.62
LINC00959-201ENST00000456581 KDM8Q8N371 416 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 ZNF454Q8N9F8 522 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 EXD3Q8N9H8 876 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 OR2AK2Q8NG84 335 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 RPS4Y2Q8TD47 263 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms