RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 NME4O00746 187 aa13.56□□□□□ -0.24
GPC1-206ENST00000455111 ENTPD5O75356 428 aa13.56□□□□□ -0.24
GPC1-206ENST00000455111 CD55P08174 381 aa13.56□□□□□ -0.24
GPC1-206ENST00000455111 EPHA1P21709 976 aa13.56□□□□□ -0.24
GPC1-206ENST00000455111 PCMT1P22061 227 aa13.56□□□□□ -0.24
GPC1-206ENST00000455111 GDI2P50395 445 aaKnown RBP13.56□□□□□ -0.24
GPC1-206ENST00000455111 SEC61A1P61619 476 aaKnown RBP13.56□□□□□ -0.24
GPC1-206ENST00000455111 PPP1CBP62140 327 aa13.56□□□□□ -0.24
GPC1-206ENST00000455111 ST3GAL3Q11203 375 aa13.56□□□□□ -0.24
GPC1-206ENST00000455111 ZNF718Q3SXZ3 478 aa13.56□□□□□ -0.24
GPC1-206ENST00000455111 MMEL1Q495T6 779 aa13.56□□□□□ -0.24
GPC1-206ENST00000455111 FAM209AQ5JX71 171 aa13.56□□□□□ -0.24
GPC1-206ENST00000455111 C1QL2Q7Z5L3 287 aa13.56□□□□□ -0.24
GPC1-206ENST00000455111 ZDHHC22Q8N966 263 aa13.56□□□□□ -0.24
GPC1-206ENST00000455111 SLC7A6Q92536 515 aa13.56□□□□□ -0.24
GPC1-206ENST00000455111 CCL17Q92583 94 aa13.56□□□□□ -0.24
GPC1-206ENST00000455111 Q96M85 177 aa13.56□□□□□ -0.24
GPC1-206ENST00000455111 PLA2G12AQ9BZM1 189 aa13.56□□□□□ -0.24
GPC1-206ENST00000455111 ZNF446Q9NWS9 450 aa13.56□□□□□ -0.24
GPC1-206ENST00000455111 A0A0A6YYJ9 748 aa13.55□□□□□ -0.24
GPC1-206ENST00000455111 A0A1W2PPL8 197 aa13.55□□□□□ -0.24
GPC1-206ENST00000455111 TMEM89A2RUT3 159 aa13.55□□□□□ -0.24
GPC1-206ENST00000455111 CLDN25C9JDP6 229 aa13.55□□□□□ -0.24
GPC1-206ENST00000455111 IGHV2-70P01814 119 aa13.55□□□□□ -0.24
GPC1-206ENST00000455111 DRD4P21917 467 aa13.55□□□□□ -0.24
GPC1-206ENST00000455111 GPR4P46093 362 aa13.55□□□□□ -0.24
GPC1-206ENST00000455111 COMPP49747 757 aaPredicted RBP13.55□□□□□ -0.24
GPC1-206ENST00000455111 SELENOVP59797 346 aa13.55□□□□□ -0.24
GPC1-206ENST00000455111 TAF11Q15544 211 aa13.55□□□□□ -0.24
GPC1-206ENST00000455111 CBLL1Q75N03 491 aa13.55□□□□□ -0.24
GPC1-206ENST00000455111 HDDC2Q7Z4H3 204 aa13.55□□□□□ -0.24
GPC1-206ENST00000455111 PEG10Q86TG7 708 aaKnown RBP13.55□□□□□ -0.24
GPC1-206ENST00000455111 TREML1Q86YW5 311 aa13.55□□□□□ -0.24
GPC1-206ENST00000455111 ZFAND2BQ8WV99 257 aa13.55□□□□□ -0.24
GPC1-206ENST00000455111 ELMOD3Q96FG2 381 aa13.55□□□□□ -0.24
GPC1-206ENST00000455111 C4orf45Q96LM5 186 aa13.55□□□□□ -0.24
GPC1-206ENST00000455111 SIGLEC11Q96RL6 698 aa13.55□□□□□ -0.24
GPC1-206ENST00000455111 SLC6A7Q99884 636 aa13.55□□□□□ -0.24
GPC1-206ENST00000455111 LRMDAQ9H2I8 198 aa13.55□□□□□ -0.24
GPC1-206ENST00000455111 MMP26Q9NRE1 261 aa13.55□□□□□ -0.24
GPC1-206ENST00000455111 DECR2Q9NUI1 292 aa13.55□□□□□ -0.24
GPC1-206ENST00000455111 GPR160Q9UJ42 338 aa13.55□□□□□ -0.24
GPC1-206ENST00000455111 CTLA4P16410 223 aa13.54□□□□□ -0.24
GPC1-206ENST00000455111 LCN2P80188 198 aa13.54□□□□□ -0.24
GPC1-206ENST00000455111 LIPEQ05469 1076 aa13.54□□□□□ -0.24
GPC1-206ENST00000455111 CDK5R2Q13319 367 aa13.54□□□□□ -0.24
GPC1-206ENST00000455111 HFEQ30201 348 aa13.54□□□□□ -0.24
GPC1-206ENST00000455111 FAM156AQ8NDB6 213 aa13.54□□□□□ -0.24
GPC1-206ENST00000455111 DVL3Q92997 716 aaPredicted RBP13.54□□□□□ -0.24
GPC1-206ENST00000455111 RBP7Q96R05 134 aa13.54□□□□□ -0.24
GPC1-206ENST00000455111 STX18Q9P2W9 335 aaKnown RBP13.54□□□□□ -0.24
GPC1-206ENST00000455111 PCDHB10Q9UN67 800 aa13.54□□□□□ -0.24
GPC1-206ENST00000455111 STARD10Q9Y365 291 aa13.54□□□□□ -0.24
GPC1-206ENST00000455111 TIMM10BQ9Y5J6 103 aa13.54□□□□□ -0.24
GPC1-206ENST00000455111 WNK2Q9Y3S1 2297 aa13.53□□□□□ -0.24
GPC1-206ENST00000455111 EFCAB9A8MZ26 197 aa13.53□□□□□ -0.24
GPC1-206ENST00000455111 TRAPPC2LH3BP13 241 aa13.53□□□□□ -0.24
GPC1-206ENST00000455111 CXCR6O00574 342 aa13.53□□□□□ -0.24
GPC1-206ENST00000455111 TPD52L2O43399 206 aaKnown RBP13.53□□□□□ -0.24
GPC1-206ENST00000455111 PTP4A3O75365 173 aa13.53□□□□□ -0.24
GPC1-206ENST00000455111 GPANK1O95872 356 aa13.53□□□□□ -0.24
GPC1-206ENST00000455111 EGR1P18146 543 aa13.53□□□□□ -0.24
GPC1-206ENST00000455111 MSR1P21757 451 aa13.53□□□□□ -0.24
GPC1-206ENST00000455111 GCH1P30793 250 aa13.53□□□□□ -0.24
GPC1-206ENST00000455111 LIMS1P48059 325 aa13.53□□□□□ -0.24
GPC1-206ENST00000455111 GUCY1A3Q02108 690 aa13.53□□□□□ -0.24
GPC1-206ENST00000455111 TEKQ02763 1124 aa13.53□□□□□ -0.24
GPC1-206ENST00000455111 TRAM2Q15035 370 aa13.53□□□□□ -0.24
GPC1-206ENST00000455111 CCDC92Q53HC0 331 aaPredicted RBP13.53□□□□□ -0.24
GPC1-206ENST00000455111 KLF17Q5JT82 389 aaPredicted RBP13.53□□□□□ -0.24
GPC1-206ENST00000455111 C12orf54Q6X4T0 127 aa13.53□□□□□ -0.24
GPC1-206ENST00000455111 TMPRSS11FQ6ZWK6 438 aa13.53□□□□□ -0.24
GPC1-206ENST00000455111 MBOAT2Q6ZWT7 520 aa13.53□□□□□ -0.24
GPC1-206ENST00000455111 USP43Q70EL4 1123 aa13.53□□□□□ -0.24
GPC1-206ENST00000455111 VASH1Q7L8A9 365 aaPredicted RBP13.53□□□□□ -0.24
GPC1-206ENST00000455111 OAFQ86UD1 273 aa13.53□□□□□ -0.24
GPC1-206ENST00000455111 DEFB108BQ8NET1 73 aa13.53□□□□□ -0.24
GPC1-206ENST00000455111 SLC7A13Q8TCU3 470 aa13.53□□□□□ -0.24
GPC1-206ENST00000455111 FAM216AQ8WUB2 273 aa13.53□□□□□ -0.24
GPC1-206ENST00000455111 ACOT11Q8WXI4 607 aaPredicted RBP13.53□□□□□ -0.24
GPC1-206ENST00000455111 C22orf15Q8WYQ4 148 aa13.53□□□□□ -0.24
GPC1-206ENST00000455111 RASD2Q96D21 266 aa13.53□□□□□ -0.24
GPC1-206ENST00000455111 HSH2DQ96JZ2 352 aa13.53□□□□□ -0.24
GPC1-206ENST00000455111 GPA33Q99795 319 aa13.53□□□□□ -0.24
GPC1-206ENST00000455111 KCNN2Q9H2S1 579 aa13.53□□□□□ -0.24
GPC1-206ENST00000455111 IFNA14P01570 189 aa13.52□□□□□ -0.25
GPC1-206ENST00000455111 DBHP09172 617 aa13.52□□□□□ -0.25
GPC1-206ENST00000455111 NCK1P16333 377 aa13.52□□□□□ -0.25
GPC1-206ENST00000455111 SLC9A3P48764 834 aa13.52□□□□□ -0.25
GPC1-206ENST00000455111 GSK3BP49841 420 aa13.52□□□□□ -0.25
GPC1-206ENST00000455111 SLC7A2P52569 658 aa13.52□□□□□ -0.25
GPC1-206ENST00000455111 MAPRE2Q15555 327 aa13.52□□□□□ -0.25
GPC1-206ENST00000455111 SHQ1Q6PI26 577 aaKnown RBP13.52□□□□□ -0.25
GPC1-206ENST00000455111 PTCHD4Q6ZW05 846 aa13.52□□□□□ -0.25
GPC1-206ENST00000455111 SYT9Q86SS6 491 aa13.52□□□□□ -0.25
GPC1-206ENST00000455111 FAM86B1Q8N7N1 296 aa13.52□□□□□ -0.25
GPC1-206ENST00000455111 RAB1CQ92928 201 aa13.52□□□□□ -0.25
GPC1-206ENST00000455111 RAB39BQ96DA2 213 aa13.52□□□□□ -0.25
GPC1-206ENST00000455111 C1orf147Q96MC9 270 aaPredicted RBP13.52□□□□□ -0.25
GPC1-206ENST00000455111 FNDC11Q9BVV2 318 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms