RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 MAT1AQ00266 395 aaKnown RBP9.53□□□□□ -0.88
GTF3C2-206ENST00000454704 PUDPQ08623 228 aa9.53□□□□□ -0.88
GTF3C2-206ENST00000454704 ZP4Q12836 540 aa9.53□□□□□ -0.88
GTF3C2-206ENST00000454704 EXOSC2Q13868 293 aaKnown RBP9.53□□□□□ -0.88
GTF3C2-206ENST00000454704 OPCMLQ14982 345 aa9.53□□□□□ -0.88
GTF3C2-206ENST00000454704 RAB11BQ15907 218 aa9.53□□□□□ -0.88
GTF3C2-206ENST00000454704 LINC00303Q3SY05 128 aa9.53□□□□□ -0.88
GTF3C2-206ENST00000454704 RNASE12Q5GAN4 147 aaKnown RBP9.53□□□□□ -0.88
GTF3C2-206ENST00000454704 SFRP4Q6FHJ7 346 aaPredicted RBP9.53□□□□□ -0.88
GTF3C2-206ENST00000454704 FAM166AQ6J272 317 aa9.53□□□□□ -0.88
GTF3C2-206ENST00000454704 SLC25A25Q6KCM7 469 aa9.53□□□□□ -0.88
GTF3C2-206ENST00000454704 SLC29A4Q7RTT9 530 aa9.53□□□□□ -0.88
GTF3C2-206ENST00000454704 GRINAQ7Z429 371 aa9.53□□□□□ -0.88
GTF3C2-206ENST00000454704 ADGRG3Q86Y34 549 aa9.53□□□□□ -0.88
GTF3C2-206ENST00000454704 OR8H3Q8N146 312 aa9.53□□□□□ -0.88
GTF3C2-206ENST00000454704 NKAIN3Q8N8D7 197 aa9.53□□□□□ -0.88
GTF3C2-206ENST00000454704 ZNF519Q8TB69 540 aa9.53□□□□□ -0.88
GTF3C2-206ENST00000454704 ZNF721Q8TF20 911 aa9.53□□□□□ -0.88
GTF3C2-206ENST00000454704 TMEM234Q8WY98 164 aa9.53□□□□□ -0.88
GTF3C2-206ENST00000454704 SLC39A7Q92504 469 aa9.53□□□□□ -0.88
GTF3C2-206ENST00000454704 TMEM106AQ96A25 262 aa9.53□□□□□ -0.88
GTF3C2-206ENST00000454704 SLC25A21Q9BQT8 299 aaPredicted RBP9.53□□□□□ -0.88
GTF3C2-206ENST00000454704 POTEKPQ9BYX7 375 aa9.53□□□□□ -0.88
GTF3C2-206ENST00000454704 TSPAN10Q9H1Z9 355 aaPredicted RBP9.53□□□□□ -0.88
GTF3C2-206ENST00000454704 OR10A4Q9H209 315 aa9.53□□□□□ -0.88
GTF3C2-206ENST00000454704 SRA1Q9HD15 236 aaKnown RBP9.53□□□□□ -0.88
GTF3C2-206ENST00000454704 DUX4Q9UBX2 424 aa9.53□□□□□ -0.88
GTF3C2-206ENST00000454704 B9D1Q9UPM9 204 aa9.53□□□□□ -0.88
GTF3C2-206ENST00000454704 TDRD6O60522 2096 aaKnown RBP9.53□□□□□ -0.88
GTF3C2-206ENST00000454704 EXPH5Q8NEV8 1989 aa9.52□□□□□ -0.88
GTF3C2-206ENST00000454704 PLSCR5A0PG75 271 aa9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 PRSS37A4D1T9 235 aa9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 PRR32B1ATL7 298 aa9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 G3V3Q6 166 aa9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 L7N2F9 121 aa9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 RRP8O43159 456 aaKnown RBP9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 NDUFB5O43674 189 aa9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 SDC3O75056 442 aa9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 NPIPB7O75200 414 aa9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 CTAG2O75638 210 aa9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 CDC123O75794 336 aaPredicted RBP9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 RPP14O95059 124 aaKnown RBP9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 AKR7A3O95154 331 aa9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 DDAH2O95865 285 aa9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 PDGFAP04085 211 aa9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 ISG15P05161 165 aa9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 ACHEP22303 614 aa9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 MST1P26927 711 aa9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 CALCRP30988 508 aa9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 PRSS3P35030 304 aa9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 MAZP56270 477 aaKnown RBP9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 TAS2R19P59542 299 aa9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 HNRNPKP61978 463 aaKnown RBP eCLIP9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 ZNF117Q03924 483 aa9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 C1orf61Q13536 156 aa9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 RTP5Q14D33 572 aa9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 EBPQ15125 230 aaKnown RBP9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 NNATQ16517 81 aa9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 TOR2AQ5JU69 321 aa9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 LPCAT3Q6P1A2 487 aa9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 ZNF704Q6ZNC4 412 aaPredicted RBP9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 KANSL1Q7Z3B3 1105 aa9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 ZNF761Q86XN6 746 aaPredicted RBP9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 IZUMO1Q8IYV9 350 aa9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 TMEM229BQ8NBD8 167 aa9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 OR6M1Q8NGM8 313 aa9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 SNIP1Q8TAD8 396 aaKnown RBP9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 TSEN15Q8WW01 171 aaKnown RBP9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 TAAR8Q969N4 342 aa9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 KTI12Q96EK9 354 aaPredicted RBP9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 DPCDQ9BVM2 203 aaPredicted RBP9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 TBL1XR1Q9BZK7 514 aa9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 NRSN2Q9GZP1 204 aa9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 NKIRAS2Q9NYR9 191 aa9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 MED11Q9P086 117 aa9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 SEMA5BQ9P283 1151 aa9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 KLK11Q9UBX7 282 aa9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 PISDQ9UG56 409 aa9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 KLHDC2Q9Y2U9 406 aa9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 SESN1Q9Y6P5 492 aa9.52□□□□□ -0.89
GTF3C2-206ENST00000454704 IDSB3KWA1 339 aa9.51□□□□□ -0.89
GTF3C2-206ENST00000454704 OIP5O43482 229 aa9.51□□□□□ -0.89
GTF3C2-206ENST00000454704 B3GALNT1O75752 331 aa9.51□□□□□ -0.89
GTF3C2-206ENST00000454704 AQP8O94778 261 aa9.51□□□□□ -0.89
GTF3C2-206ENST00000454704 AHSA1O95433 338 aa9.51□□□□□ -0.89
GTF3C2-206ENST00000454704 PMS2P2O95744 297 aa9.51□□□□□ -0.89
GTF3C2-206ENST00000454704 F13BP05160 661 aa9.51□□□□□ -0.89
GTF3C2-206ENST00000454704 GABRA1P14867 456 aa9.51□□□□□ -0.89
GTF3C2-206ENST00000454704 RAB6AP20340 208 aa9.51□□□□□ -0.89
GTF3C2-206ENST00000454704 NFYAP23511 347 aaPredicted RBP9.51□□□□□ -0.89
GTF3C2-206ENST00000454704 DCTDP32321 178 aa9.51□□□□□ -0.89
GTF3C2-206ENST00000454704 KIR3DL2P43630 455 aa9.51□□□□□ -0.89
GTF3C2-206ENST00000454704 SLC26A5P58743 744 aa9.51□□□□□ -0.89
GTF3C2-206ENST00000454704 GPR85P60893 370 aa9.51□□□□□ -0.89
GTF3C2-206ENST00000454704 INSM1Q01101 510 aaPredicted RBP9.51□□□□□ -0.89
GTF3C2-206ENST00000454704 PLCXD2Q0VAA5 305 aa9.51□□□□□ -0.89
GTF3C2-206ENST00000454704 ERV3-1Q14264 604 aa9.51□□□□□ -0.89
GTF3C2-206ENST00000454704 PCGF3Q3KNV8 242 aa9.51□□□□□ -0.89
GTF3C2-206ENST00000454704 C14orf28Q4W4Y0 310 aa9.51□□□□□ -0.89
GTF3C2-206ENST00000454704 WDR38Q5JTN6 314 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms